YLS9-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g12441 |
| rosa_chinensis | RchiOBHm_Chr5g0020351 |
| rosa_multiflora | Rmu_sc0002087.1_g000002 Rmu_sc0007157.1_g000004 |
| rosa_rugosa | Rorug05G0058800 |
| rosa_samantha | Rh5AG149000 Rh5BG148700 Rh5CG160200 Rh5DG147400 |
| rosa_wichuraiana | Rw5G013210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 207 |
| AciI | CCGC | 2 cut(s) | 5, 296 |
| AclI | AACGTT | 1 cut(s) | 525 |
| AclWI | GGATC | 3 cut(s) | 83, 552, 565 |
| AcoI | YGGCCR | 1 cut(s) | 573 |
| AfaI | GTAC | 2 cut(s) | 81, 305 |
| AgsI | TTSAA | 3 cut(s) | 229, 385, 523 |
| AhlI | ACTAGT | 1 cut(s) | 584 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 491, 523 |
| AluBI | AGCT | 1 cut(s) | 436 |
| AluI | AGCT | 1 cut(s) | 436 |
| Alw26I | GTCTC | 1 cut(s) | 494 |
| AlwI | GGATC | 3 cut(s) | 83, 552, 565 |
| Aor13HI | TCCGGA | 1 cut(s) | 207 |
| AoxI | GGCC | 2 cut(s) | 467, 573 |
| AspLEI | GCGC | 1 cut(s) | 486 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AsuHPI | GGTGA | 3 cut(s) | 136, 193, 413 |
| AsuII | TTCGAA | 1 cut(s) | 596 |
| BalI | TGGCCA | 1 cut(s) | 575 |
| BamHI | GGATCC | 1 cut(s) | 557 |
| BauI | CACGAG | 1 cut(s) | 83 |
| BbsI | GAAGAC | 2 cut(s) | 251, 335 |
| BceAI | ACGGC | 1 cut(s) | 309 |
| BciVI | GTATCC | 1 cut(s) | 604 |
| BclI | TGATCA | 1 cut(s) | 534 |
| BcoDI | GTCTC | 1 cut(s) | 494 |
| BcuI | ACTAGT | 1 cut(s) | 584 |
| BfaI | CTAG | 2 cut(s) | 585, 646 |
| BfoI | RGCGCY | 1 cut(s) | 487 |
| BfuI | GTATCC | 1 cut(s) | 604 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BmiI | GGNNCC | 2 cut(s) | 212, 559 |
| BmsI | GCATC | 1 cut(s) | 124 |
| BpiI | GAAGAC | 2 cut(s) | 251, 335 |
| Bpu14I | TTCGAA | 1 cut(s) | 596 |
| BsaBI | GATNNNNATC | 1 cut(s) | 562 |
| BsaI | GGTCTC | 1 cut(s) | 494 |
| BsaJI | CCNNGG | 1 cut(s) | 570 |
| BsaWI | WCCGGW | 1 cut(s) | 207 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 491, 521 |
| Bse1I | ACTGG | 3 cut(s) | 55, 224, 544 |
| Bse8I | GATNNNNATC | 1 cut(s) | 562 |
| BseAI | TCCGGA | 1 cut(s) | 207 |
| BseDI | CCNNGG | 1 cut(s) | 570 |
| BseGI | GGATG | 1 cut(s) | 382 |
| BseJI | GATNNNNATC | 1 cut(s) | 562 |
| BseNI | ACTGG | 3 cut(s) | 55, 224, 544 |
| BshFI | GGCC | 2 cut(s) | 469, 575 |
| BsiSI | CCGG | 1 cut(s) | 208 |
| BsmAI | GTCTC | 1 cut(s) | 494 |
| BsnI | GGCC | 2 cut(s) | 469, 575 |
| Bso31I | GGTCTC | 1 cut(s) | 494 |
| Bsp119I | TTCGAA | 1 cut(s) | 596 |
| Bsp13I | TCCGGA | 1 cut(s) | 207 |
| Bsp143I | GATC | 3 cut(s) | 75, 534, 557 |
| Bsp19I | CCATGG | 1 cut(s) | 570 |
| BspACI | CCGC | 2 cut(s) | 5, 296 |
| BspANI | GGCC | 2 cut(s) | 469, 575 |
| BspEI | TCCGGA | 1 cut(s) | 207 |
| BspLI | GGNNCC | 2 cut(s) | 212, 559 |
| BspPI | GGATC | 3 cut(s) | 83, 552, 565 |
| BspT104I | TTCGAA | 1 cut(s) | 596 |
| BspTNI | GGTCTC | 1 cut(s) | 494 |
| BsrI | ACTGG | 3 cut(s) | 55, 224, 544 |
| BssECI | CCNNGG | 1 cut(s) | 570 |
| BssMI | GATC | 3 cut(s) | 75, 534, 557 |
| BssSI | CACGAG | 1 cut(s) | 83 |
| BssT1I | CCWWGG | 1 cut(s) | 570 |
| Bst2BI | CACGAG | 1 cut(s) | 83 |
| Bst4CI | ACNGT | 1 cut(s) | 351 |
| BstBI | TTCGAA | 1 cut(s) | 596 |
| BstDSI | CCRYGG | 1 cut(s) | 570 |
| BstF5I | GGATG | 1 cut(s) | 382 |
| BstH2I | RGCGCY | 1 cut(s) | 487 |
| BstHHI | GCGC | 1 cut(s) | 486 |
| BstKTI | GATC | 3 cut(s) | 78, 537, 560 |
| BstMAI | GTCTC | 1 cut(s) | 494 |
| BstMBI | GATC | 3 cut(s) | 75, 534, 557 |
| BstNSI | RCATGY | 1 cut(s) | 393 |
| BstV2I | GAAGAC | 2 cut(s) | 251, 335 |
| BstX2I | RGATCY | 1 cut(s) | 557 |
| BstYI | RGATCY | 1 cut(s) | 557 |
| BsuI | GTATCC | 1 cut(s) | 604 |
| BsuRI | GGCC | 2 cut(s) | 469, 575 |
| BtgI | CCRYGG | 1 cut(s) | 570 |
| BtsCI | GGATG | 1 cut(s) | 382 |
| BtsIMutI | CAGTG | 2 cut(s) | 347, 537 |
| CfoI | GCGC | 1 cut(s) | 486 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| Csp6I | GTAC | 2 cut(s) | 80, 304 |
| CviAII | CATG | 3 cut(s) | 125, 390, 571 |
| CviJI | RGCY | 4 cut(s) | 54, 436, 469, 575 |
| CviKI_1 | RGCY | 4 cut(s) | 54, 436, 469, 575 |
| CviQI | GTAC | 2 cut(s) | 80, 304 |
| DpnI | GATC | 3 cut(s) | 77, 536, 559 |
| DpnII | GATC | 3 cut(s) | 75, 534, 557 |
| DraI | TTTAAA | 1 cut(s) | 358 |
| EaeI | YGGCCR | 1 cut(s) | 573 |
| EciI | GGCGGA | 2 cut(s) | 20, 311 |
| Eco130I | CCWWGG | 1 cut(s) | 570 |
| Eco31I | GGTCTC | 1 cut(s) | 494 |
| EcoT14I | CCWWGG | 1 cut(s) | 570 |
| ErhI | CCWWGG | 1 cut(s) | 570 |
| FaeI | CATG | 3 cut(s) | 128, 393, 574 |
| FaiI | YATR | 7 cut(s) | 104, 126, 237, 391, 514, 549, 572 |
| FatI | CATG | 3 cut(s) | 124, 389, 570 |
| FbaI | TGATCA | 1 cut(s) | 534 |
| FokI | GGATG | 1 cut(s) | 389 |
| FspBI | CTAG | 2 cut(s) | 585, 646 |
| GlaI | GCGC | 1 cut(s) | 485 |
| HaeII | RGCGCY | 1 cut(s) | 487 |
| HaeIII | GGCC | 2 cut(s) | 469, 575 |
| HapII | CCGG | 1 cut(s) | 208 |
| HhaI | GCGC | 1 cut(s) | 486 |
| Hin1II | CATG | 3 cut(s) | 128, 393, 574 |
| Hin6I | GCGC | 1 cut(s) | 484 |
| HinP1I | GCGC | 1 cut(s) | 484 |
| HinfI | GANTC | 2 cut(s) | 8, 285 |
| HpaII | CCGG | 1 cut(s) | 208 |
| HphI | GGTGA | 3 cut(s) | 136, 193, 413 |
| Hpy188I | TCNGA | 2 cut(s) | 13, 462 |
| Hpy188III | TCNNGA | 2 cut(s) | 97, 208 |
| HpyAV | CCTTC | 4 cut(s) | 126, 362, 379, 392 |
| HpyCH4III | ACNGT | 1 cut(s) | 351 |
| HpyCH4IV | ACGT | 2 cut(s) | 423, 525 |
| HpyCH4V | TGCA | 2 cut(s) | 267, 621 |
| HpySE526I | ACGT | 2 cut(s) | 423, 525 |
| Hsp92II | CATG | 3 cut(s) | 128, 393, 574 |
| HspAI | GCGC | 1 cut(s) | 484 |
| Kpn2I | TCCGGA | 1 cut(s) | 207 |
| Ksp22I | TGATCA | 1 cut(s) | 534 |
| Kzo9I | GATC | 3 cut(s) | 75, 534, 557 |
| LpnPI | CCDG | 6 cut(s) | 36, 49, 205, 221, 290, 525 |
| LweI | GCATC | 1 cut(s) | 124 |
| MaeI | CTAG | 2 cut(s) | 585, 646 |
| MaeII | ACGT | 2 cut(s) | 423, 525 |
| MaeIII | GTNAC | 3 cut(s) | 127, 401, 515 |
| MalI | GATC | 3 cut(s) | 77, 536, 559 |
| MboI | GATC | 3 cut(s) | 75, 534, 557 |
| MboII | GAAGA | 5 cut(s) | 217, 256, 340, 377, 407 |
| MflI | RGATCY | 1 cut(s) | 557 |
| MlsI | TGGCCA | 1 cut(s) | 575 |
| MluCI | AATT | 2 cut(s) | 25, 628 |
| MluNI | TGGCCA | 1 cut(s) | 575 |
| MnlI | CCTC | 6 cut(s) | 118, 148, 159, 215, 367, 577 |
| Mox20I | TGGCCA | 1 cut(s) | 575 |
| MroI | TCCGGA | 1 cut(s) | 207 |
| MscI | TGGCCA | 1 cut(s) | 575 |
| MseI | TTAA | 2 cut(s) | 357, 552 |
| Msp20I | TGGCCA | 1 cut(s) | 575 |
| MspI | CCGG | 1 cut(s) | 208 |
| NcoI | CCATGG | 1 cut(s) | 570 |
| NdeII | GATC | 3 cut(s) | 75, 534, 557 |
| NlaIII | CATG | 3 cut(s) | 128, 393, 574 |
| NlaIV | GGNNCC | 2 cut(s) | 212, 559 |
| NmuCI | GTSAC | 1 cut(s) | 401 |
| NspI | RCATGY | 1 cut(s) | 393 |
| NspV | TTCGAA | 1 cut(s) | 596 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PfeI | GAWTC | 2 cut(s) | 8, 285 |
| Psp1406I | AACGTT | 1 cut(s) | 525 |
| PspN4I | GGNNCC | 2 cut(s) | 212, 559 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PsuI | RGATCY | 1 cut(s) | 557 |
| RsaI | GTAC | 2 cut(s) | 81, 305 |
| RsaNI | GTAC | 2 cut(s) | 80, 304 |
| SaqAI | TTAA | 2 cut(s) | 357, 552 |
| Sau3AI | GATC | 3 cut(s) | 75, 534, 557 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| SetI | ASST | 7 cut(s) | 38, 118, 236, 403, 426, 438, 528 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SfuI | TTCGAA | 1 cut(s) | 596 |
| SpeI | ACTAGT | 1 cut(s) | 584 |
| Sse9I | AATT | 2 cut(s) | 25, 628 |
| SsiI | CCGC | 2 cut(s) | 5, 296 |
| SspMI | CTAG | 2 cut(s) | 585, 646 |
| StyI | CCWWGG | 1 cut(s) | 570 |
| TaaI | ACNGT | 1 cut(s) | 351 |
| TaiI | ACGT | 2 cut(s) | 426, 528 |
| TaqI | TCGA | 1 cut(s) | 596 |
| TaqII | GACCGA | 1 cut(s) | 518 |
| TasI | AATT | 2 cut(s) | 25, 628 |
| TfiI | GAWTC | 2 cut(s) | 8, 285 |
| Tru1I | TTAA | 2 cut(s) | 357, 552 |
| Tru9I | TTAA | 2 cut(s) | 357, 552 |
| TscAI | CASTG | 2 cut(s) | 354, 544 |
| TseFI | GTSAC | 1 cut(s) | 401 |
| Tsp45I | GTSAC | 1 cut(s) | 401 |
| TspDTI | ATGAA | 2 cut(s) | 46, 113 |
| TspRI | CASTG | 2 cut(s) | 354, 544 |
| XceI | RCATGY | 1 cut(s) | 393 |
| XspI | CTAG | 2 cut(s) | 585, 646 |