TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0262671 RchiOBHm_Chr6g0262841 |
| rosa_multiflora | Rmu_sc0005237.1_g000020 |
| rosa_roxburghii | Rroxscaffold_7G00207680 |
| rosa_wichuraiana | Rw6G009780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 57 |
| AccII | CGCG | 1 cut(s) | 420 |
| AciI | CCGC | 3 cut(s) | 55, 363, 420 |
| AcoI | YGGCCR | 2 cut(s) | 3, 338 |
| AcsI | RAATTY | 2 cut(s) | 389, 527 |
| AdeI | CACNNNGTG | 1 cut(s) | 73 |
| AfaI | GTAC | 2 cut(s) | 624, 666 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 276 |
| AgsI | TTSAA | 5 cut(s) | 143, 308, 548, 638, 752 |
| AluBI | AGCT | 4 cut(s) | 20, 235, 464, 722 |
| AluI | AGCT | 4 cut(s) | 20, 235, 464, 722 |
| Alw26I | GTCTC | 1 cut(s) | 243 |
| Ama87I | CYCGRG | 1 cut(s) | 618 |
| AoxI | GGCC | 3 cut(s) | 3, 338, 494 |
| ApeKI | GCWGC | 4 cut(s) | 266, 461, 476, 793 |
| ApoI | RAATTY | 2 cut(s) | 389, 527 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 207, 294 |
| AsuHPI | GGTGA | 3 cut(s) | 407, 443, 457 |
| AvaI | CYCGRG | 1 cut(s) | 618 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 710 |
| BbvI | GCAGC | 4 cut(s) | 278, 473, 488, 805 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 245, 279 |
| BciVI | GTATCC | 2 cut(s) | 91, 603 |
| BcoDI | GTCTC | 1 cut(s) | 243 |
| BfaI | CTAG | 1 cut(s) | 842 |
| BfuI | GTATCC | 2 cut(s) | 91, 603 |
| BisI | GCNGC | 4 cut(s) | 267, 462, 477, 794 |
| BlsI | GCNGC | 4 cut(s) | 268, 463, 478, 795 |
| BmeT110I | CYCGRG | 1 cut(s) | 618 |
| BmsI | GCATC | 1 cut(s) | 520 |
| BpiI | GAAGAC | 1 cut(s) | 710 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 448, 480 |
| BsaBI | GATNNNNATC | 2 cut(s) | 174, 863 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 792, 822 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 276 |
| Bse1I | ACTGG | 2 cut(s) | 297, 602 |
| Bse8I | GATNNNNATC | 2 cut(s) | 174, 863 |
| BseGI | GGATG | 1 cut(s) | 592 |
| BseJI | GATNNNNATC | 2 cut(s) | 174, 863 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 276 |
| BseMII | CTCAG | 1 cut(s) | 71 |
| BseNI | ACTGG | 2 cut(s) | 297, 602 |
| BseRI | GAGGAG | 2 cut(s) | 201, 795 |
| BseXI | GCAGC | 4 cut(s) | 278, 473, 488, 805 |
| BsgI | GTGCAG | 1 cut(s) | 543 |
| Bsh1236I | CGCG | 1 cut(s) | 420 |
| BshFI | GGCC | 3 cut(s) | 5, 340, 496 |
| BsiHKCI | CYCGRG | 1 cut(s) | 618 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 276 |
| BsmAI | GTCTC | 1 cut(s) | 243 |
| BsnI | GGCC | 3 cut(s) | 5, 340, 496 |
| BsoBI | CYCGRG | 1 cut(s) | 618 |
| Bsp143I | GATC | 1 cut(s) | 175 |
| BspACI | CCGC | 3 cut(s) | 55, 363, 420 |
| BspANI | GGCC | 3 cut(s) | 5, 340, 496 |
| BspCNI | CTCAG | 1 cut(s) | 72 |
| BspFNI | CGCG | 1 cut(s) | 420 |
| BsrBI | CCGCTC | 1 cut(s) | 57 |
| BsrI | ACTGG | 2 cut(s) | 297, 602 |
| BssMI | GATC | 1 cut(s) | 175 |
| Bst4CI | ACNGT | 1 cut(s) | 110 |
| Bst6I | CTCTTC | 2 cut(s) | 40, 543 |
| BstDEI | CTNAG | 1 cut(s) | 80 |
| BstF5I | GGATG | 1 cut(s) | 592 |
| BstFNI | CGCG | 1 cut(s) | 420 |
| BstKTI | GATC | 1 cut(s) | 178 |
| BstMAI | GTCTC | 1 cut(s) | 243 |
| BstMBI | GATC | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 502 |
| BstUI | CGCG | 1 cut(s) | 420 |
| BstV1I | GCAGC | 4 cut(s) | 278, 473, 488, 805 |
| BstV2I | GAAGAC | 1 cut(s) | 710 |
| BsuI | GTATCC | 2 cut(s) | 91, 603 |
| BsuRI | GGCC | 3 cut(s) | 5, 340, 496 |
| BtsCI | GGATG | 1 cut(s) | 592 |
| BtsI | GCAGTG | 1 cut(s) | 757 |
| BtsIMutI | CAGTG | 1 cut(s) | 757 |
| CseI | GACGC | 1 cut(s) | 884 |
| Csp6I | GTAC | 2 cut(s) | 623, 665 |
| CviAII | CATG | 4 cut(s) | 60, 413, 670, 797 |
| CviJI | RGCY | 8 cut(s) | 5, 20, 235, 269, 340, 464, 496, 722 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 20, 235, 269, 340, 464, 496, 722 |
| CviQI | GTAC | 2 cut(s) | 623, 665 |
| DdeI | CTNAG | 1 cut(s) | 80 |
| DpnI | GATC | 1 cut(s) | 177 |
| DpnII | GATC | 1 cut(s) | 175 |
| DraI | TTTAAA | 1 cut(s) | 285 |
| DraIII | CACNNNGTG | 1 cut(s) | 73 |
| EaeI | YGGCCR | 2 cut(s) | 3, 338 |
| Eam1104I | CTCTTC | 2 cut(s) | 40, 543 |
| EarI | CTCTTC | 2 cut(s) | 40, 543 |
| Eco88I | CYCGRG | 1 cut(s) | 618 |
| FaeI | CATG | 4 cut(s) | 63, 416, 673, 800 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 618, 650 |
| FatI | CATG | 4 cut(s) | 59, 412, 669, 796 |
| FauI | CCCGC | 2 cut(s) | 62, 370 |
| Fnu4HI | GCNGC | 4 cut(s) | 267, 462, 477, 794 |
| FokI | GGATG | 1 cut(s) | 599 |
| Fsp4HI | GCNGC | 4 cut(s) | 267, 462, 477, 794 |
| FspBI | CTAG | 1 cut(s) | 842 |
| GluI | GCNGC | 4 cut(s) | 267, 462, 477, 794 |
| HaeIII | GGCC | 3 cut(s) | 5, 340, 496 |
| HgaI | GACGC | 1 cut(s) | 884 |
| Hin1II | CATG | 4 cut(s) | 63, 416, 673, 800 |
| HincII | GTYRAC | 1 cut(s) | 811 |
| HindII | GTYRAC | 1 cut(s) | 811 |
| HinfI | GANTC | 5 cut(s) | 150, 227, 423, 838, 882 |
| HphI | GGTGA | 3 cut(s) | 407, 443, 457 |
| Hpy166II | GTNNAC | 2 cut(s) | 727, 811 |
| Hpy188I | TCNGA | 7 cut(s) | 81, 89, 202, 256, 472, 790, 835 |
| Hpy8I | GTNNAC | 2 cut(s) | 727, 811 |
| HpyAV | CCTTC | 2 cut(s) | 422, 585 |
| HpyCH4III | ACNGT | 1 cut(s) | 110 |
| HpyCH4V | TGCA | 5 cut(s) | 63, 127, 266, 407, 560 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 502 |
| HpyF3I | CTNAG | 1 cut(s) | 80 |
| Hsp92II | CATG | 4 cut(s) | 63, 416, 673, 800 |
| Kzo9I | GATC | 1 cut(s) | 175 |
| LpnPI | CCDG | 6 cut(s) | 102, 115, 278, 474, 491, 615 |
| Lsp1109I | GCAGC | 4 cut(s) | 278, 473, 488, 805 |
| LweI | GCATC | 1 cut(s) | 520 |
| MaeI | CTAG | 1 cut(s) | 842 |
| MaeIII | GTNAC | 1 cut(s) | 755 |
| MalI | GATC | 1 cut(s) | 177 |
| MbiI | CCGCTC | 1 cut(s) | 57 |
| MboI | GATC | 1 cut(s) | 175 |
| MboII | GAAGA | 6 cut(s) | 27, 170, 203, 334, 560, 715 |
| MfeI | CAATTG | 3 cut(s) | 11, 711, 735 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 417 |
| MmeI | TCCRAC | 1 cut(s) | 434 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 2 cut(s) | 207, 294 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 222, 284 |
| MslI | CAYNNNNRTG | 1 cut(s) | 516 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MunI | CAATTG | 3 cut(s) | 11, 711, 735 |
| MvnI | CGCG | 1 cut(s) | 420 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 502 |
| NdeII | GATC | 1 cut(s) | 175 |
| NlaIII | CATG | 4 cut(s) | 63, 416, 673, 800 |
| NmuCI | GTSAC | 1 cut(s) | 755 |
| PdmI | GAANNNNTTC | 2 cut(s) | 207, 294 |
| PfeI | GAWTC | 4 cut(s) | 150, 227, 838, 882 |
| PkrI | GCNGC | 4 cut(s) | 268, 463, 478, 795 |
| PleI | GAGTC | 1 cut(s) | 417 |
| PpsI | GAGTC | 1 cut(s) | 417 |
| RsaI | GTAC | 2 cut(s) | 624, 666 |
| RsaNI | GTAC | 2 cut(s) | 623, 665 |
| RseI | CAYNNNNRTG | 1 cut(s) | 516 |
| SaqAI | TTAA | 2 cut(s) | 222, 284 |
| SatI | GCNGC | 4 cut(s) | 267, 462, 477, 794 |
| Sau3AI | GATC | 1 cut(s) | 175 |
| SchI | GAGTC | 1 cut(s) | 417 |
| SfaNI | GCATC | 1 cut(s) | 520 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 516 |
| SsiI | CCGC | 3 cut(s) | 55, 363, 420 |
| SspMI | CTAG | 1 cut(s) | 842 |
| TaaI | ACNGT | 1 cut(s) | 110 |
| TaqI | TCGA | 3 cut(s) | 320, 426, 873 |
| TfiI | GAWTC | 4 cut(s) | 150, 227, 838, 882 |
| Tru1I | TTAA | 2 cut(s) | 222, 284 |
| Tru9I | TTAA | 2 cut(s) | 222, 284 |
| TscAI | CASTG | 1 cut(s) | 764 |
| TseFI | GTSAC | 1 cut(s) | 755 |
| TseI | GCWGC | 4 cut(s) | 266, 461, 476, 793 |
| Tsp45I | GTSAC | 1 cut(s) | 755 |
| TspDTI | ATGAA | 6 cut(s) | 151, 287, 303, 429, 534, 540 |
| TspRI | CASTG | 1 cut(s) | 764 |
| XapI | RAATTY | 2 cut(s) | 389, 527 |
| XmnI | GAANNNNTTC | 2 cut(s) | 207, 294 |
| XspI | CTAG | 1 cut(s) | 842 |