RchiOBHm_Chr6g0311411

N-terminal C2 in EEIG1 and EHBP1 proteins

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
68353836 .. 68357863
4028 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28006

Sequence Viewer

Length: 3348 bp
ATGATGATGCAGAAAACTGAGTCTAAGAAGAGTAACAGTTCTGGTCAATTGTTGCGTGACATTGAGGAAATAAGCAAAGCCCTTTACTTGCATAAACCTCCTCCAAAGGCTTTGTTGCCTCCTCCTCCTCATGATTCACGGTCCAAATCCGCTGAAAAGACCCGGTTTTCGGGCTCCAATTCGAACCCGGCATTTCTTAGGGAAGATTTGTTGCATAAGGACAAGAAGTCATCTTCAATTTGGAATTGGAAGAAGCCCTTGAAGGCTCTCAGTCACATTGGGAATCGGAAGTTCAATTGTTGTTTTTATCTTCATGTTCACGCACTTGAAGGTTTGCCTGTGAGTTTCAACAATCTGAGCGTGTGTGTGCATTGGAAGAGGAAGGATGAGGTGCTTCAGACCAGTTGCTCGATGGTCGAAGAGGGCATGGCTGAATTCGATGAAACTTTGATGCATAGGTGTACTGTGTATGGGAGTAGAAATGGCCCAAACAATTCGGTTAAATATGCGGAGAAGCTTTGTTTGATCTACATTTCTGTGAATGGGGCACCGGGGCTTGATATTGGGAAGCATTGGGTTGATCTTACAAGGCTGTTGCCACTTACTTTTGAGGAGTTAGAGGGGGAGAAGAGCTTTGGGAAATGGTCGACTAGCTTTAACCTTTCAGGCAAGGCTAAAGGCGGTAAGCTAAATGTTAGTTTGGGGTTTTTGGTGACACAGGATAAGGTTGCTAATTTGAGTGGTAATCCAAATGTTCCTCAGGTTATAGACGCTGTGCCGAAAAGGTCAAGTAGCTTGGATACTGGTGCTAGGAGGATGCTTCGAAGAGTTGGTAGCGTGCCAAGTAATGTAGCCTCCAGGCCTGCCTTTTCATCTCAGACTCTTGATTTGAAGGTTTCTCAGGAAGTTATGCTGACGGGAGGATTGGAGCTTTCCAAGTCGATTAATTTCTTATGTCAGAGACTTGATGAGGGGAAGTTGGGTAGAGTAATAGAGTCAGATTCTGAAGATGTGGTCCCACTCAAACCTCAGCCAGATTTGGATGGTTTATCTGCTAAGGGAATCGAAGAGTATGAGGATGATAATGATGTTGAATTTACCATTGTCGAAGTTGGGACAGAAATACCTGAGAAGGAAAAGTTGAACTCTGATCGAGTTTCTGGTGATGCTAATGACGTTTCCGCAATTGAGAATATCTATGTGGATGATGTCATTGAGGATTATGACATAGACCTTGATGAGAAGACTATGATTGTTTCAAAGGATGTCTGTGGCAATTATGTGGATGACTTCATGGTGAATGAAACAAAACATGAAGAAGATAGCATATGCAGATCAAACATGAAAGAGGTGGAGTCAGCAGAGTTGAATCATCCATTTGCTTTAGAAGAGTGTCTTGAGGAGAGAGGCCACATGGAGCTTAAGTCGACTTACATGGCTAGTAAAACAGGTAAAAAATCACTTAGCCTGGATGATGTTACTGAATCTGTATCAAATGAGTTCTTAAACATGCTGGGGATGGATGGTTGCTGGAGTTCTAATAGTGATCCAGAGTCTCCTAGAGAACTACTTTTAAGAGAGTTTGAAAAAGAGGCTCTGACTTCTGGAGATTTATTTTTCAATGTTGATTGGAATGAAGAGCAGCCCGAAATTGGATCCTCTGTTTCTCCGGTTTCTTACTATGAAGATTATTTTGAAAATTCTGATTTGTCTATGATTATTCAAGCTGCTGAAGAGGAAAGCAAGAGAGAAAGTGACTTATTAAAGAGAAGAAAAGCCACAATCCTGGAAGGCTTGGAGACCGAAGCTTTGATGCGAGAATGGGGATTAAATGAAACGGACTTTCAGAACTCTCCACGTATCCTTTCTGGTGGATTTGGCAGTCCAATTGATCTACCCCTTGAAGAGCCACCGCTACCACCACTTGAAGTAGGCTTTGGTCCTTATGTTCGAATGAGGGGTGGAGGTTTTTTGCAGTCTATGAATCCTTCTCTTTTCAGAAATGCTAAAAATAGTGGGACTTTGGTCATTCAAGTTTCTAATCCAATTGTAATACCGGCAAAACTGGGTTATGATGTTGTGGAGATATTGCAGCAGTTGGCACTGGGTGGAATTGGTAAGTTGCATATGCAGGTGAGCAAGCTAATGCCTTTGGAAAATATAACCGGCAAGACAATACATCAAGTAGCATGGGAGGCGGTACCAACCACAGTGCTTACTTCTTATAGTTGTTTCAGGTTTGAGCAGATTTTGTATGGTGAGAGCAAGGATGAAGGGTTTCCATCTAGTTGGAATTTTAATGACCTGAGATCAGAACTAGAAGGTGGTGAGATGGGATCAGACTATGTATCTCTAGAATGTCTTGTTCCATTAGCTATAAATAAGATTGAAGCCCTCTCACTGGAAGGGTTAAGAATACAGTCTCACATGTCAGATTCAGAGGCACCGTCAAGTATATATCCTCAGTCTGGTGGGAGGATTACATGCCCACATGCAAATTGTGGTGAAATTTTCAGGTCAGGAGTTGGAGGAGGGTTGCGAATGTCGGATTTTAGAGACTCTGATGATGATATTGATGAATTATTGGATCTGTCTTTATCATTGGAAGAGTGGTCAAGGCTAGATGCTAATATTCGTGGTGATGAAGATCAAAGCAGAGAGCAGTTTTTGAAAATCCTTGCTGCTCATGATGCCAAGTGCACAGATTTGGTTGATGAAATTTTGACGGAAGACGGGAGCTGCAGTGATTTATCTGGTAGGAATTGTGGAGTCTTGGGAAACAATCTCACAATTGCTCTCATGGTGCAGCTTAGAGATCCCTTTCGGAACTATGAGCCAGTTGGTGGGCCAATGCTTGCTCTAATCCAAGTGGAGAGAGGTATAACCCATTCAATTCGAAAAATTCCTAGCACGGTGTTGAATGATAGCAACGAAAAAGAACATGATGTCACCATCTTAGAGGATATTGATGGCAAGGAAACAGAGAGAAATGAAGGAGATGAAGAAGGCAATCCCCAGTTTAAAATTATCGATGTCCATCTTGCAGGAGTGGACACTGAGTCTGGTAACGAGCAGCTTTGGGGTACTACAACACAACTGCAATCCGGGTCCCGATGGTTGCTTGCTGCTGGTTTGGGTAAGGCCATTAGTTTTCCACTTTCGAACTCAAAAGCCATTGTGAGATCATCCCCATTGGCTTCAGCGAAGTGGCAGTACAGGGATAGTTTCTGGAGCATCTCCTCTACTTCTCATGTTCAGGATACGAGAGCTGCGTGGAAAGACTTGATTGCTCCACATATTCGAAACCCTAATGTCATATTTTTGAATGAAACCATCAAGCCACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1115

Amino Acids

123.87

Weight (kDa)

4.84

Isoelectric Point (pI)

50.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 95 - 237 1e-16 N-terminal C2 in EEIG1 and EHBP1 proteins
PMI1_PMIR1-2_C PF21745 675 - 819 4.6e-41 PMI1/PMIR1-2, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2122
Acc36I ACCTGC 1 cut(s) 2122
Acc65I GGTACC 1 cut(s) 2200
AccB1I GGYRCC 3 cut(s) 547, 2200, 2443
AccB7I CCANNNNNTGG 1 cut(s) 2843
AccI GTMKAC 2 cut(s) 647, 1427
AciI CCGC 6 cut(s) 150, 509, 681, 1182, 1913, 2198
AclWI GGATC 6 cut(s) 1541, 1650, 1663, 2344, 2595, 2810
AcsI RAATTY 7 cut(s) 434, 1094, 1699, 2293, 2508, 2718, 2901
AcuI CTGAAG 4 cut(s) 380, 1026, 1752, 3183
AdeI CACNNNGTG 1 cut(s) 2108
AfaI GTAC 4 cut(s) 463, 2202, 3085, 3215
AfiI CCNNNNNNNGG 5 cut(s) 169, 1652, 2401, 2468, 2843
AflII CTTAAG 1 cut(s) 1421
AflIII ACRYGT 1 cut(s) 2427
AhdI GACNNNNNGTC 2 cut(s) 226, 3058
AjnI CCWGG 3 cut(s) 857, 1467, 1785
AjuI GAANNNNNNNTTGG 2 cut(s) 1920, 1952
Alw21I GWGCWC 1 cut(s) 2702
Alw26I GTCTC 5 cut(s) 955, 1560, 1793, 2427, 2550
Alw44I GTGCAC 1 cut(s) 2698
AlwI GGATC 6 cut(s) 1541, 1650, 1663, 2344, 2595, 2810
AlwNI CAGNNNCTG 1 cut(s) 1004
AoxI GGCC 5 cut(s) 484, 860, 1408, 2846, 3141
ApaLI GTGCAC 1 cut(s) 2698
ApeKI GCWGC 9 cut(s) 1642, 1727, 2092, 2681, 2739, 2806, 3073, 3125, 3269
ApoI RAATTY 7 cut(s) 434, 1094, 1699, 2293, 2508, 2718, 2901
ArsI GACNNNNNNTTYG 6 cut(s) 151, 183, 871, 903, 1792, 1824
AseI ATTAAT 1 cut(s) 945
Asp700I GAANNNNTTC 1 cut(s) 2277
Asp718I GGTACC 1 cut(s) 2200
AspS9I GGNCC 6 cut(s) 141, 485, 1015, 1940, 2846, 3108
AsuC2I CCSGG 4 cut(s) 163, 188, 552, 3106
AsuHPI GGTGA 9 cut(s) 724, 1175, 1309, 2146, 2270, 2339, 2516, 2651, 2941
AsuII TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
AvaII GGWCC 4 cut(s) 141, 1015, 1940, 3108
AxyI CCTNAGG 1 cut(s) 759
BaeGI GKGCMC 2 cut(s) 550, 2702
BamHI GGATCC 1 cut(s) 1655
BanI GGYRCC 3 cut(s) 547, 2200, 2443
BanII GRGCYC 1 cut(s) 176
BarI GAAGNNNNNNTAC 2 cut(s) 3197, 3229
BbsI GAAGAC 2 cut(s) 1250, 2736
Bbv12I GWGCWC 1 cut(s) 2702
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 9 cut(s) 1654, 1714, 2104, 2668, 2726, 2818, 3085, 3112, 3256
BciT130I CCWGG 3 cut(s) 859, 1469, 1787
BciVI GTATCC 3 cut(s) 793, 1871, 3253
BcnI CCSGG 4 cut(s) 163, 188, 552, 3106
BcoDI GTCTC 5 cut(s) 955, 1560, 1793, 2427, 2550
BfaI CTAG 9 cut(s) 651, 810, 1440, 1560, 2286, 2318, 2354, 2621, 2907
BfmI CTRYAG 1 cut(s) 2740
BfrI CTTAAG 1 cut(s) 1421
BfuAI ACCTGC 1 cut(s) 2122
BfuI GTATCC 3 cut(s) 793, 1871, 3253
BisI GCNGC 9 cut(s) 1643, 1728, 2093, 2682, 2740, 2807, 3074, 3126, 3270
BlsI GCNGC 9 cut(s) 1644, 1729, 2094, 2683, 2741, 2808, 3075, 3127, 3271
Bme1390I CCNGG 7 cut(s) 163, 188, 552, 859, 1469, 1787, 3106
Bme18I GGWCC 4 cut(s) 141, 1015, 1940, 3108
BmeRI GACNNNNNGTC 2 cut(s) 226, 3058
BmgT120I GGNCC 6 cut(s) 141, 485, 1015, 1940, 2846, 3108
BmiI GGNNCC 8 cut(s) 175, 549, 1017, 1657, 2202, 2445, 3109, 3110
BmrFI CCNGG 7 cut(s) 163, 188, 552, 859, 1469, 1787, 3106
BmrI ACTGGG 3 cut(s) 2075, 2114, 3010
BmsI GCATC 7 cut(s) 441, 807, 1156, 1803, 2614, 2680, 3243
BmuI ACTGGG 3 cut(s) 2075, 2114, 3010
BoxI GACNNNNGTC 1 cut(s) 2024
BpiI GAAGAC 2 cut(s) 1250, 2736
BpmI CTGGAG 4 cut(s) 841, 1552, 1626, 3250
Bpu10I CCTNAGC 2 cut(s) 1029, 1056
Bpu14I TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
BpuEI CTTGAG 1 cut(s) 1418
BpuMI CCSGG 4 cut(s) 163, 188, 552, 3106
Bsa29I ATCGAT 1 cut(s) 3030
BsaAI YACGTR 1 cut(s) 1859
BsaBI GATNNNNATC 2 cut(s) 2646, 3036
BsaI GGTCTC 1 cut(s) 1793
BsaJI CCNNGG 1 cut(s) 551
BsaWI WCCGGW 1 cut(s) 1669
BsaXI ACNNNNNCTCC 4 cut(s) 1409, 1439, 2728, 2758
Bsc4I CCNNNNNNNGG 5 cut(s) 169, 1652, 2401, 2468, 2843
Bse118I RCCGGY 2 cut(s) 2056, 2165
Bse1I ACTGG 7 cut(s) 402, 808, 2070, 2109, 2406, 2837, 3016
Bse21I CCTNAGG 1 cut(s) 759
Bse8I GATNNNNATC 2 cut(s) 2646, 3036
BseBI CCWGG 3 cut(s) 859, 1469, 1787
BseCI ATCGAT 1 cut(s) 3030
BseDI CCNNGG 1 cut(s) 551
BseJI GATNNNNATC 2 cut(s) 2646, 3036
BseLI CCNNNNNNNGG 5 cut(s) 169, 1652, 2401, 2468, 2843
BseNI ACTGG 7 cut(s) 402, 808, 2070, 2109, 2406, 2837, 3016
BseRI GAGGAG 8 cut(s) 90, 111, 114, 117, 626, 1415, 2544, 3229
BseSI GKGCMC 2 cut(s) 550, 2702
BseXI GCAGC 9 cut(s) 1654, 1714, 2104, 2668, 2726, 2818, 3085, 3112, 3256
BseYI CCCAGC 1 cut(s) 1513
BsgI GTGCAG 1 cut(s) 2825
BshFI GGCC 5 cut(s) 486, 862, 1410, 2848, 3143
BshNI GGYRCC 3 cut(s) 547, 2200, 2443
BshVI ATCGAT 1 cut(s) 3030
BsiHKAI GWGCWC 1 cut(s) 2702
BsiSI CCGG 7 cut(s) 163, 188, 551, 1670, 2057, 2166, 3105
BslFI GGGAC 4 cut(s) 1001, 1129, 2032, 3094
BslI CCNNNNNNNGG 5 cut(s) 169, 1652, 2401, 2468, 2843
BsmAI GTCTC 5 cut(s) 955, 1560, 1793, 2427, 2550
BsmFI GGGAC 4 cut(s) 1001, 1129, 2032, 3094
BsnI GGCC 5 cut(s) 486, 862, 1410, 2848, 3143
Bso31I GGTCTC 1 cut(s) 1793
Bsp119I TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
Bsp1286I GDGCHC 3 cut(s) 176, 550, 2702
BspACI CCGC 6 cut(s) 150, 509, 681, 1182, 1913, 2198
BspANI GGCC 5 cut(s) 486, 862, 1410, 2848, 3143
BspDI ATCGAT 1 cut(s) 3030
BspHI TCATGA 2 cut(s) 130, 2686
BspLI GGNNCC 8 cut(s) 175, 549, 1017, 1657, 2202, 2445, 3109, 3110
BspMAI CTGCAG 1 cut(s) 2744
BspMI ACCTGC 1 cut(s) 2122
BspPI GGATC 6 cut(s) 1541, 1650, 1663, 2344, 2595, 2810
BspQI GCTCTTC 3 cut(s) 623, 1632, 1899
BspT104I TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
BspT107I GGYRCC 3 cut(s) 547, 2200, 2443
BspTI CTTAAG 1 cut(s) 1421
BspTNI GGTCTC 1 cut(s) 1793
BsrFI RCCGGY 2 cut(s) 2056, 2165
BsrI ACTGG 7 cut(s) 402, 808, 2070, 2109, 2406, 2837, 3016
BssAI RCCGGY 2 cut(s) 2056, 2165
BssECI CCNNGG 1 cut(s) 551
Bst2UI CCWGG 3 cut(s) 859, 1469, 1787
Bst4CI ACNGT 7 cut(s) 38, 141, 466, 2212, 2421, 2448, 2914
BstAFI CTTAAG 1 cut(s) 1421
BstBAI YACGTR 1 cut(s) 1859
BstBI TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
BstC8I GCNNGC 5 cut(s) 839, 864, 2141, 2856, 3123
BstMAI GTCTC 5 cut(s) 955, 1560, 1793, 2427, 2550
BstMWI GCNNNNNNNGC 2 cut(s) 2195, 2690
BstNI CCWGG 3 cut(s) 859, 1469, 1787
BstNSI RCATGY 4 cut(s) 1513, 2431, 2487, 2495
BstPAI GACNNNNGTC 1 cut(s) 2024
BstSCI CCNGG 7 cut(s) 161, 186, 550, 857, 1467, 1785, 3104
BstSFI CTRYAG 1 cut(s) 2740
BstSLI GKGCMC 2 cut(s) 550, 2702
BstV1I GCAGC 9 cut(s) 1654, 1714, 2104, 2668, 2726, 2818, 3085, 3112, 3256
BstV2I GAAGAC 2 cut(s) 1250, 2736
BstX2I RGATCY 3 cut(s) 1655, 2587, 2815
BstXI CCANNNNNNTGG 2 cut(s) 1786, 2289
BstYI RGATCY 3 cut(s) 1655, 2587, 2815
Bsu15I ATCGAT 1 cut(s) 3030
Bsu36I CCTNAGG 1 cut(s) 759
BsuI GTATCC 3 cut(s) 793, 1871, 3253
BsuRI GGCC 5 cut(s) 486, 862, 1410, 2848, 3143
BsuTUI ATCGAT 1 cut(s) 3030
BtsI GCAGTG 1 cut(s) 2749
BtsIMutI CAGTG 6 cut(s) 2102, 2217, 2399, 2749, 3054, 3343
BveI ACCTGC 1 cut(s) 2122
Cac8I GCNNGC 5 cut(s) 839, 864, 2141, 2856, 3123
CaiI CAGNNNCTG 1 cut(s) 1004
CciI TCATGA 2 cut(s) 130, 2686
Cfr10I RCCGGY 2 cut(s) 2056, 2165
Cfr13I GGNCC 6 cut(s) 141, 485, 1015, 1940, 2846, 3108
ClaI ATCGAT 1 cut(s) 3030
CseI GACGC 1 cut(s) 779
Csp6I GTAC 4 cut(s) 462, 2201, 3084, 3214
CviQI GTAC 4 cut(s) 462, 2201, 3084, 3214
DraI TTTAAA 1 cut(s) 3022
DraIII CACNNNGTG 1 cut(s) 2108
DriI GACNNNNNGTC 2 cut(s) 226, 3058
Eam1105I GACNNNNNGTC 2 cut(s) 226, 3058
Eco147I AGGCCT 1 cut(s) 862
Eco24I GRGCYC 1 cut(s) 176
Eco31I GGTCTC 1 cut(s) 1793
Eco47I GGWCC 4 cut(s) 141, 1015, 1940, 3108
Eco57I CTGAAG 4 cut(s) 380, 1026, 1752, 3183
Eco81I CCTNAGG 1 cut(s) 759
EcoO109I RGGNCCY 1 cut(s) 3108
EcoRI GAATTC 1 cut(s) 434
EcoRII CCWGG 3 cut(s) 857, 1467, 1785
EcoT22I ATGCAT 1 cut(s) 456
EcoT38I GRGCYC 1 cut(s) 176
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 1380, 1412
FaqI GGGAC 4 cut(s) 1001, 1129, 2032, 3094
FauNDI CATATG 2 cut(s) 1328, 2127
FblI GTMKAC 2 cut(s) 647, 1427
Fnu4HI GCNGC 9 cut(s) 1643, 1728, 2093, 2682, 2740, 2807, 3074, 3126, 3270
FriOI GRGCYC 1 cut(s) 176
Fsp4HI GCNGC 9 cut(s) 1643, 1728, 2093, 2682, 2740, 2807, 3074, 3126, 3270
FspBI CTAG 9 cut(s) 651, 810, 1440, 1560, 2286, 2318, 2354, 2621, 2907
GluI GCNGC 9 cut(s) 1643, 1728, 2093, 2682, 2740, 2807, 3074, 3126, 3270
GsaI CCCAGC 1 cut(s) 1517
GsuI CTGGAG 4 cut(s) 841, 1552, 1626, 3250
HaeIII GGCC 5 cut(s) 486, 862, 1410, 2848, 3143
HapII CCGG 7 cut(s) 163, 188, 551, 1670, 2057, 2166, 3105
HgaI GACGC 1 cut(s) 779
HincII GTYRAC 2 cut(s) 648, 1428
HindII GTYRAC 2 cut(s) 648, 1428
HindIII AAGCTT 2 cut(s) 515, 1806
HpaII CCGG 7 cut(s) 163, 188, 551, 1670, 2057, 2166, 3105
HphI GGTGA 9 cut(s) 724, 1175, 1309, 2146, 2270, 2339, 2516, 2651, 2941
Hpy166II GTNNAC 6 cut(s) 319, 462, 648, 1428, 2700, 3052
Hpy8I GTNNAC 6 cut(s) 319, 462, 648, 1428, 2700, 3052
HpyCH4III ACNGT 7 cut(s) 38, 141, 466, 2212, 2421, 2448, 2914
HpyCH4IV ACGT 2 cut(s) 1176, 1858
HpyF10VI GCNNNNNNNGC 2 cut(s) 2195, 2690
HpySE526I ACGT 2 cut(s) 1176, 1858
KflI GGGWCCC 1 cut(s) 3108
KpnI GGTACC 1 cut(s) 2204
LguI GCTCTTC 3 cut(s) 623, 1632, 1899
LmnI GCTCC 6 cut(s) 179, 928, 1417, 2736, 3231, 3295
Lsp1109I GCAGC 9 cut(s) 1654, 1714, 2104, 2668, 2726, 2818, 3085, 3112, 3256
LweI GCATC 7 cut(s) 441, 807, 1156, 1803, 2614, 2680, 3243
MaeI CTAG 9 cut(s) 651, 810, 1440, 1560, 2286, 2318, 2354, 2621, 2907
MaeII ACGT 2 cut(s) 1176, 1858
MaeIII GTNAC 8 cut(s) 32, 56, 272, 712, 1477, 1754, 2947, 3065
MfeI CAATTG 6 cut(s) 47, 295, 1185, 1887, 2046, 2790
MflI RGATCY 3 cut(s) 1655, 2587, 2815
MhlI GDGCHC 3 cut(s) 176, 550, 2702
MlyI GAGTC 8 cut(s) 29, 874, 1004, 1364, 1562, 2552, 2778, 3068
MmeI TCCRAC 3 cut(s) 2270, 2506, 2526
Mph1103I ATGCAT 1 cut(s) 456
MroXI GAANNNNTTC 1 cut(s) 2277
MslI CAYNNNNRTG 1 cut(s) 536
MspA1I CMGCKG 1 cut(s) 152
MspCI CTTAAG 1 cut(s) 1421
MspI CCGG 7 cut(s) 163, 188, 551, 1670, 2057, 2166, 3105
MspR9I CCNGG 7 cut(s) 163, 188, 552, 859, 1469, 1787, 3106
MunI CAATTG 6 cut(s) 47, 295, 1185, 1887, 2046, 2790
MvaI CCWGG 3 cut(s) 859, 1469, 1787
MwoI GCNNNNNNNGC 2 cut(s) 2195, 2690
NciI CCSGG 4 cut(s) 163, 188, 552, 3106
NdeI CATATG 2 cut(s) 1328, 2127
NlaIV GGNNCC 8 cut(s) 175, 549, 1017, 1657, 2202, 2445, 3109, 3110
NmuCI GTSAC 5 cut(s) 56, 272, 712, 1754, 2947
NsiI ATGCAT 1 cut(s) 456
NspI RCATGY 4 cut(s) 1513, 2431, 2487, 2495
NspV TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
PagI TCATGA 2 cut(s) 130, 2686
PaqCI CACCTGC 1 cut(s) 2122
PceI AGGCCT 1 cut(s) 862
PciI ACATGT 1 cut(s) 2427
PciSI GCTCTTC 3 cut(s) 623, 1632, 1899
PcsI WCGNNNNNNNCGW 1 cut(s) 3269
PdmI GAANNNNTTC 1 cut(s) 2277
PfeI GAWTC 8 cut(s) 134, 283, 1001, 1062, 1369, 1484, 1984, 2435
PflMI CCANNNNNTGG 1 cut(s) 2843
PfoI TCCNGGA 1 cut(s) 1785
PkrI GCNGC 9 cut(s) 1644, 1729, 2094, 2683, 2741, 2808, 3075, 3127, 3271
PleI GAGTC 8 cut(s) 28, 874, 1003, 1363, 1561, 2552, 2777, 3067
PpsI GAGTC 8 cut(s) 28, 874, 1003, 1363, 1561, 2552, 2777, 3067
Ppu21I YACGTR 1 cut(s) 1859
PpuMI RGGWCCY 1 cut(s) 3108
PscI ACATGT 1 cut(s) 2427
PshAI GACNNNNGTC 1 cut(s) 2024
PshBI ATTAAT 1 cut(s) 945
Psp5II RGGWCCY 1 cut(s) 3108
Psp6I CCWGG 3 cut(s) 857, 1467, 1785
PspFI CCCAGC 1 cut(s) 1513
PspGI CCWGG 3 cut(s) 857, 1467, 1785
PspN4I GGNNCC 8 cut(s) 175, 549, 1017, 1657, 2202, 2445, 3109, 3110
PspPI GGNCC 6 cut(s) 141, 485, 1015, 1940, 2846, 3108
PspPPI RGGWCCY 1 cut(s) 3108
PstI CTGCAG 1 cut(s) 2744
PstNI CAGNNNCTG 1 cut(s) 1004
PsuI RGATCY 3 cut(s) 1655, 2587, 2815
RsaI GTAC 4 cut(s) 463, 2202, 3085, 3215
RsaNI GTAC 4 cut(s) 462, 2201, 3084, 3214
RseI CAYNNNNRTG 1 cut(s) 536
SalI GTCGAC 2 cut(s) 646, 1426
SapI GCTCTTC 3 cut(s) 623, 1632, 1899
SatI GCNGC 9 cut(s) 1643, 1728, 2093, 2682, 2740, 2807, 3074, 3126, 3270
Sau96I GGNCC 6 cut(s) 141, 485, 1015, 1940, 2846, 3108
SchI GAGTC 8 cut(s) 29, 874, 1004, 1364, 1562, 2552, 2778, 3068
ScrFI CCNGG 7 cut(s) 163, 188, 552, 859, 1469, 1787, 3106
SduI GDGCHC 3 cut(s) 176, 550, 2702
SfaNI GCATC 7 cut(s) 441, 807, 1156, 1803, 2614, 2680, 3243
SfcI CTRYAG 1 cut(s) 2740
SfuI TTCGAA 6 cut(s) 182, 823, 1951, 2896, 3161, 3301
SinI GGWCC 4 cut(s) 141, 1015, 1940, 3108
SmiMI CAYNNNNRTG 1 cut(s) 536
SmlI CTYRAG 2 cut(s) 1397, 1421
SmoI CTYRAG 2 cut(s) 1397, 1421
SseBI AGGCCT 1 cut(s) 862
SsiI CCGC 6 cut(s) 150, 509, 681, 1182, 1913, 2198
SspI AATATT 1 cut(s) 2632
SspMI CTAG 9 cut(s) 651, 810, 1440, 1560, 2286, 2318, 2354, 2621, 2907
StuI AGGCCT 1 cut(s) 862
StyD4I CCNGG 7 cut(s) 161, 186, 550, 857, 1467, 1785, 3104
TaaI ACNGT 7 cut(s) 38, 141, 466, 2212, 2421, 2448, 2914
TaiI ACGT 2 cut(s) 1179, 1861
TaqII GACCGA 1 cut(s) 1817
TatI WGTACW 2 cut(s) 461, 3213
TfiI GAWTC 8 cut(s) 134, 283, 1001, 1062, 1369, 1484, 1984, 2435
TscAI CASTG 5 cut(s) 2109, 2217, 2406, 2749, 3061
TseFI GTSAC 5 cut(s) 56, 272, 712, 1754, 2947
TseI GCWGC 9 cut(s) 1642, 1727, 2092, 2681, 2739, 2806, 3073, 3125, 3269
Tsp45I GTSAC 5 cut(s) 56, 272, 712, 1754, 2947
TspGWI ACGGA 2 cut(s) 1853, 2741
TspRI CASTG 5 cut(s) 2109, 2217, 2406, 2749, 3061
Van91I CCANNNNNTGG 1 cut(s) 2843
Vha464I CTTAAG 1 cut(s) 1421
VneI GTGCAC 1 cut(s) 2698
VpaK11BI GGWCC 4 cut(s) 141, 1015, 1940, 3108
VspI ATTAAT 1 cut(s) 945
XapI RAATTY 7 cut(s) 434, 1094, 1699, 2293, 2508, 2718, 2901
XbaI TCTAGA 1 cut(s) 2353
XceI RCATGY 4 cut(s) 1513, 2431, 2487, 2495
XcmI CCANNNNNNNNNTGG 1 cut(s) 409
XmiI GTMKAC 2 cut(s) 647, 1427
XmnI GAANNNNTTC 1 cut(s) 2277
XspI CTAG 9 cut(s) 651, 810, 1440, 1560, 2286, 2318, 2354, 2621, 2907
Zsp2I ATGCAT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.