RchiOBHm_Chr7g0181341

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0017181
Physical Location & Seq
Forward (+)
2934693 .. 2937072
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16173

Sequence Viewer

Length: 1935 bp
ATGAACACCTGTTCACACCTTTGCTCTTCTTTGTTAAACAAATGCAAGACCCTGAAAACCATGAAGCAAGTCCACGCCTTTGTGCACAAGACCGGGCTCGACACCGACCCCTTGGTCTTCGGCAAGCTCCTCCTCCACTGCGCCGTCACAATCTCCTCCGACGCACTCGACTACGCTCGCCGCCTCTTTCTTCATTTTCCATACCCAGATACGTTCATGTACAACACCCTTATCCGCGGACTCGCCGACTCCGATAACCCACACAATGCACTTCTCCTGTTCCATGACATGCGTCGGAAATATGTAAGACCGATCGATAGCTTCTCTTTCGCTTTCACGCTCAAGGCGGCGGCGAATTGCGGGTCGCTGAGGGAAGGGATGCAACTGCATTGTCAGGGTTTGTTGCATGGGTTACATACTCATGTTTTCGTTGGGACAACTCTGGTTAGTATGTATGGTGAATGTGGGTGTATTGGTCTTGCACGGAAGGTGTTCGATGAAATGCCTGAACCAAATGTGGTCGCTTGGAACGCGGTGCTTACGGCGTGTTTTAAGTGTGGGGATGTGGAGGGTGCGGAGGAAGTGTTTGGATCAATGCCTTGGAAAGATTTGACCTCGTGGAATATTGTGGTTGCGGGATACGTGAAGGCGGATGAGCTTGAGCTGGCGAAGGAAGCGTTTTGGAGGATGCCAGTGAAGGATGATGTGTCTTGGAGTACTATGATTGTTGGGTTTGCGCAGAGCGGTTGTTTTGATGAGGCATTTGGGTTTTTCGGGGAGCTACAGCGGAAGGGTGTTAGGCCAAATGAGGCTAGCTTGAGTGGGGTGCTGTCTGCGTGTGCGCAGGCTGGAGCGGTTGAGTTTGGTAGAATTTTGCATGGTTTGGTGGAGAAGGCTGGATTCCTTTCGATGATTTCAGTCAATAATGCACTCCTGGATATGTACTCTAAGTCTGGAAATGTGGAGATGGCTCGGTTGGTCTTTGAAAGAATGCCGGAGAGAAAGAGTGTTGTTTCTTGGACTTCGATGATAGCAGCACTTGCAATGCATGGTTATGGCAAAGAAGCAATACAATTTTTCTGCAGGATGGAAGCGTCTGGAGTTAGGCCTGATGGGATCGCATTCATTTCTGTTTTGTATGCTTGTAGTCATGCTGGGTTGGTTAACGAAGGATGTGAATATTTCTCTAAGATGAGAGATTTGTATGGTATAGAACCAGCTATTGACCATTACGGTTGTATGGTAGACCTGTACGGTCGAGCTGGAAAACTGCAGAAAGCCTATGATTTTGTATGTCAGTTGCCAATATCTCCTAATGCTATTGTTTGGCGAACTCTTCTTGGGGCTTGTAGCATTCATGGTAATGTAGAGTTGGCAGAACAAGTGAAGGAAATGCTTTCCAAACTTGACCCTGACAATGCAGGCGACCATGTTCTCTTGTCAAATGTGTATGCTGCTGCAGGGAAGTGGAAAGACGTTGCTGCTGTAAGAAGATCAATGGCTGACCAGAAGATTAAGAAAACTCCAGGTTGGAGCGTGATTGAAGTTGGCAAGGTCATGTATCGCTTTGTGGCGGGCGATAAATCAAACAAGATCACAGAAGAGGCTTATGAGAAGTTAAGGGAGATAATGCTGAAGCTTCGTGTTGGTGGAGGTTATTTGCCGGAGGTTGGGAGTGTTCTGCATGACATAGAAGTGGAGGACAAAGAAGATTCAGTGTTCATGCACGGTGAGAAACTTGCAGTAGCTTTTGGGTTGGCAAGATTGCCCGAGGGAAGGATGATAAGGATAGTGAAGAATTTGCGGGTTTGTAGAGACTGTCATACAGTGATGAAGCTGATTTCTAAGGTCTATAGATCAGAGATAGTGGTGAGGGATAGAAGCCGCTTTCACTCCTTCAAAGATGGCTGTTGTTCATGCAACGATTACTGGTGA

Protein Analysis

644

Amino Acids

71.73

Weight (kDa)

7.5

Isoelectric Point (pI)

34.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 69 - 115 2.5e-06 PPR repeat family
PPR_2 PF13041 234 - 281 1.9e-08 PPR repeat family
PPR PF01535 236 - 266 5.8e-07 PPR repeat
PPR_2 PF13041 336 - 383 1.2e-07 PPR repeat family
PPR PF01535 338 - 368 2.4e-06 PPR repeat
E_motif PF20431 453 - 515 2.4e-18 E motif
DYW_deaminase PF14432 552 - 644 3.1e-37 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017181)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74630 AT1G74630
fragaria_vesca FvH4_5g14980
malus_domestica MD14G1199700.v1.1
prunus_persica Prupe.5G193000_v2.0.a1
pyrus_communis pycom14g16550
rosa_chinensis RchiOBHm_Chr7g0181341
rosa_laevigata RLG00000005197
rosa_rugosa Rorug06G0440400
rosa_samantha Rh7AG042300 Rh7BG041200 Rh7CG043600
rosa_wichuraiana Rw7G003490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 113
Acc16I TGCGCA 2 cut(s) 738, 843
AccBSI CCGCTC 2 cut(s) 744, 854
AccI GTMKAC 1 cut(s) 1245
AccII CGCG 2 cut(s) 237, 533
AclWI GGATC 2 cut(s) 598, 1124
AcsI RAATTY 2 cut(s) 870, 1798
AcuI CTGAAG 1 cut(s) 1655
AfaI GTAC 4 cut(s) 221, 718, 944, 1253
AfiI CCNNNNNNNGG 2 cut(s) 1670, 1776
AgsI TTSAA 3 cut(s) 986, 1544, 1900
AjnI CCWGG 2 cut(s) 933, 1525
Alw21I GWGCWC 1 cut(s) 87
Alw26I GTCTC 1 cut(s) 1809
Alw44I GTGCAC 1 cut(s) 83
AlwI GGATC 2 cut(s) 598, 1124
Ama87I CYCGRG 1 cut(s) 1769
AoxI GGCC 2 cut(s) 800, 1106
ApaLI GTGCAC 1 cut(s) 83
ApeKI GCWGC 4 cut(s) 1034, 1454, 1457, 1481
ApoI RAATTY 2 cut(s) 870, 1798
ArsI GACNNNNNNTTYG 2 cut(s) 347, 379
Asp700I GAANNNNTTC 1 cut(s) 491
AspLEI GCGC 3 cut(s) 143, 739, 844
AsuC2I CCSGG 1 cut(s) 94
AsuHPI GGTGA 3 cut(s) 470, 1742, 1882
AsuNHI GCTAGC 1 cut(s) 812
AvaI CYCGRG 1 cut(s) 1769
BaeGI GKGCMC 1 cut(s) 87
BanII GRGCYC 1 cut(s) 99
BauI CACGAG 1 cut(s) 616
BbsI GAAGAC 1 cut(s) 109
Bbv12I GWGCWC 1 cut(s) 87
BbvCI CCTCAGC 1 cut(s) 368
BbvI GCAGC 4 cut(s) 1046, 1441, 1444, 1468
BccI CCATC 4 cut(s) 961, 1081, 1106, 1898
BceAI ACGGC 2 cut(s) 128, 558
BciT130I CCWGG 2 cut(s) 935, 1527
BciVI GTATCC 1 cut(s) 632
BcnI CCSGG 1 cut(s) 94
BcoDI GTCTC 1 cut(s) 1809
BfaI CTAG 1 cut(s) 813
BfmI CTRYAG 5 cut(s) 782, 1081, 1271, 1458, 1852
BfuI GTATCC 1 cut(s) 632
BisI GCNGC 8 cut(s) 181, 348, 351, 1035, 1455, 1458, 1482, 1885
BlsI GCNGC 8 cut(s) 182, 349, 352, 1036, 1456, 1459, 1483, 1886
BmcAI AGTACT 1 cut(s) 718
Bme1390I CCNGG 3 cut(s) 94, 935, 1527
BmeT110I CYCGRG 1 cut(s) 1769
BmrFI CCNGG 3 cut(s) 94, 935, 1527
BmsI GCATC 2 cut(s) 369, 678
BmtI GCTAGC 1 cut(s) 816
BoxI GACNNNNGTC 1 cut(s) 291
BpiI GAAGAC 1 cut(s) 109
BpmI CTGGAG 3 cut(s) 870, 1119, 1509
Bpu10I CCTNAGC 1 cut(s) 368
BpuEI CTTGAG 3 cut(s) 326, 680, 838
BpuMI CCSGG 1 cut(s) 94
Bsa29I ATCGAT 1 cut(s) 315
BsaAI YACGTR 1 cut(s) 643
BsaJI CCNNGG 4 cut(s) 111, 235, 599, 1770
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 2 cut(s) 1670, 1776
Bse1I ACTGG 2 cut(s) 692, 1934
Bse3DI GCAATG 1 cut(s) 1050
BseBI CCWGG 2 cut(s) 935, 1527
BseCI ATCGAT 1 cut(s) 315
BseDI CCNNGG 4 cut(s) 111, 235, 599, 1770
BseGI GGATG 8 cut(s) 384, 568, 658, 693, 706, 1092, 1178, 1785
BseLI CCNNNNNNNGG 2 cut(s) 1670, 1776
BseMI GCAATG 1 cut(s) 1050
BseMII CTCAG 1 cut(s) 359
BseNI ACTGG 2 cut(s) 692, 1934
BseRI GAGGAG 3 cut(s) 119, 122, 145
BseSI GKGCMC 1 cut(s) 87
BseXI GCAGC 4 cut(s) 1046, 1441, 1444, 1468
BseYI CCCAGC 1 cut(s) 1154
Bsh1236I CGCG 2 cut(s) 237, 533
Bsh1285I CGRYCG 2 cut(s) 315, 1258
BshFI GGCC 2 cut(s) 802, 1108
BshVI ATCGAT 1 cut(s) 315
BsiEI CGRYCG 2 cut(s) 315, 1258
BsiHKAI GWGCWC 1 cut(s) 87
BsiHKCI CYCGRG 1 cut(s) 1769
BsiSI CCGG 3 cut(s) 93, 995, 1664
BslFI GGGAC 1 cut(s) 448
BslI CCNNNNNNNGG 2 cut(s) 1670, 1776
BsmAI GTCTC 1 cut(s) 1809
BsmFI GGGAC 1 cut(s) 448
BsmI GAATGC 3 cut(s) 996, 1121, 1353
BsnI GGCC 2 cut(s) 802, 1108
BsoBI CYCGRG 1 cut(s) 1769
Bsp1286I GDGCHC 2 cut(s) 87, 99
Bsp1407I TGTACA 1 cut(s) 219
Bsp143I GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
BspANI GGCC 2 cut(s) 802, 1108
BspCNI CTCAG 1 cut(s) 360
BspDI ATCGAT 1 cut(s) 315
BspFNI CGCG 2 cut(s) 237, 533
BspMAI CTGCAG 3 cut(s) 1085, 1275, 1462
BspOI GCTAGC 1 cut(s) 816
BspPI GGATC 2 cut(s) 598, 1124
BspQI GCTCTTC 1 cut(s) 31
BsrBI CCGCTC 2 cut(s) 744, 854
BsrDI GCAATG 1 cut(s) 1050
BsrGI TGTACA 1 cut(s) 219
BsrI ACTGG 2 cut(s) 692, 1934
BssECI CCNNGG 4 cut(s) 111, 235, 599, 1770
BssMI GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
BssSI CACGAG 1 cut(s) 616
BssT1I CCWWGG 2 cut(s) 111, 599
Bst2BI CACGAG 1 cut(s) 616
Bst2UI CCWGG 2 cut(s) 935, 1527
Bst4CI ACNGT 5 cut(s) 1235, 1256, 1730, 1820, 1828
Bst6I CTCTTC 3 cut(s) 31, 1341, 1596
BstAPI GCANNNNNTGC 1 cut(s) 1040
BstAUI TGTACA 1 cut(s) 219
BstBAI YACGTR 1 cut(s) 643
BstC8I GCNNGC 7 cut(s) 125, 178, 666, 814, 846, 1423, 1576
BstDEI CTNAG 4 cut(s) 368, 948, 1188, 1845
BstDSI CCRYGG 1 cut(s) 235
BstF5I GGATG 8 cut(s) 384, 568, 658, 693, 706, 1092, 1178, 1785
BstFNI CGCG 2 cut(s) 237, 533
BstHHI GCGC 3 cut(s) 143, 739, 844
BstKTI GATC 6 cut(s) 315, 593, 1119, 1496, 1596, 1859
BstMAI GTCTC 1 cut(s) 1809
BstMBI GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
BstMCI CGRYCG 2 cut(s) 315, 1258
BstMWI GCNNNNNNNGC 3 cut(s) 530, 674, 1040
BstNI CCWGG 2 cut(s) 935, 1527
BstNSI RCATGY 1 cut(s) 292
BstPAI GACNNNNGTC 1 cut(s) 291
BstSCI CCNGG 3 cut(s) 92, 933, 1525
BstSFI CTRYAG 5 cut(s) 782, 1081, 1271, 1458, 1852
BstSLI GKGCMC 1 cut(s) 87
BstUI CGCG 2 cut(s) 237, 533
BstV1I GCAGC 4 cut(s) 1046, 1441, 1444, 1468
BstV2I GAAGAC 1 cut(s) 109
Bsu15I ATCGAT 1 cut(s) 315
BsuI GTATCC 1 cut(s) 632
BsuRI GGCC 2 cut(s) 802, 1108
BsuTUI ATCGAT 1 cut(s) 315
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 8 cut(s) 384, 568, 658, 693, 706, 1092, 1178, 1785
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 4 cut(s) 136, 699, 1722, 1833
Cac8I GCNNGC 7 cut(s) 125, 178, 666, 814, 846, 1423, 1576
CfoI GCGC 3 cut(s) 143, 739, 844
Cfr42I CCGCGG 1 cut(s) 238
ClaI ATCGAT 1 cut(s) 315
CseI GACGC 3 cut(s) 170, 281, 1083
Csp6I GTAC 4 cut(s) 220, 717, 943, 1252
CviQI GTAC 4 cut(s) 220, 717, 943, 1252
DdeI CTNAG 4 cut(s) 368, 948, 1188, 1845
DpnI GATC 6 cut(s) 314, 592, 1118, 1495, 1595, 1858
DpnII GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
DrdI GACNNNNNNGTC 1 cut(s) 113
DseDI GACNNNNNNGTC 1 cut(s) 113
Eam1104I CTCTTC 3 cut(s) 31, 1341, 1596
EarI CTCTTC 3 cut(s) 31, 1341, 1596
EciI GGCGGA 1 cut(s) 665
Eco130I CCWWGG 2 cut(s) 111, 599
Eco147I AGGCCT 1 cut(s) 1108
Eco24I GRGCYC 1 cut(s) 99
Eco57I CTGAAG 1 cut(s) 1655
Eco88I CYCGRG 1 cut(s) 1769
EcoRII CCWGG 2 cut(s) 933, 1525
EcoT14I CCWWGG 2 cut(s) 111, 599
EcoT22I ATGCAT 1 cut(s) 1050
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 2 cut(s) 111, 599
FaqI GGGAC 1 cut(s) 448
FauI CCCGC 4 cut(s) 353, 628, 1567, 1797
FblI GTMKAC 1 cut(s) 1245
Fnu4HI GCNGC 8 cut(s) 181, 348, 351, 1035, 1455, 1458, 1482, 1885
FokI GGATG 8 cut(s) 391, 575, 665, 700, 713, 1099, 1185, 1792
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 8 cut(s) 181, 348, 351, 1035, 1455, 1458, 1482, 1885
FspBI CTAG 1 cut(s) 813
FspI TGCGCA 2 cut(s) 738, 843
GlaI GCGC 3 cut(s) 142, 738, 843
GluI GCNGC 8 cut(s) 181, 348, 351, 1035, 1455, 1458, 1482, 1885
GsaI CCCAGC 1 cut(s) 1158
GsuI CTGGAG 3 cut(s) 870, 1119, 1509
HaeIII GGCC 2 cut(s) 802, 1108
HapII CCGG 3 cut(s) 93, 995, 1664
HgaI GACGC 3 cut(s) 170, 281, 1083
HhaI GCGC 3 cut(s) 143, 739, 844
Hin6I GCGC 3 cut(s) 141, 737, 842
HinP1I GCGC 3 cut(s) 141, 737, 842
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HindIII AAGCTT 1 cut(s) 1637
HinfI GANTC 4 cut(s) 240, 248, 900, 1712
HpaI GTTAAC 1 cut(s) 1165
HpaII CCGG 3 cut(s) 93, 995, 1664
HphI GGTGA 3 cut(s) 470, 1742, 1882
Hpy166II GTNNAC 5 cut(s) 14, 73, 85, 1165, 1246
Hpy188I TCNGA 4 cut(s) 160, 253, 297, 1861
Hpy188III TCNNGA 2 cut(s) 954, 1098
Hpy8I GTNNAC 5 cut(s) 14, 73, 85, 1165, 1246
Hpy99I CGWCG 2 cut(s) 164, 297
HpyCH4III ACNGT 5 cut(s) 1235, 1256, 1730, 1820, 1828
HpyCH4IV ACGT 3 cut(s) 212, 642, 1476
HpyF10VI GCNNNNNNNGC 3 cut(s) 530, 674, 1040
HpyF3I CTNAG 4 cut(s) 368, 948, 1188, 1845
HpySE526I ACGT 3 cut(s) 212, 642, 1476
HspAI GCGC 3 cut(s) 141, 737, 842
KspAI GTTAAC 1 cut(s) 1165
KspI CCGCGG 1 cut(s) 238
Kzo9I GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
LguI GCTCTTC 1 cut(s) 31
LmnI GCTCC 4 cut(s) 132, 778, 851, 1533
Lsp1109I GCAGC 4 cut(s) 1046, 1441, 1444, 1468
LweI GCATC 2 cut(s) 369, 678
MaeI CTAG 1 cut(s) 813
MaeII ACGT 3 cut(s) 212, 642, 1476
MaeIII GTNAC 2 cut(s) 145, 411
MalI GATC 6 cut(s) 314, 592, 1118, 1495, 1595, 1858
MbiI CCGCTC 2 cut(s) 744, 854
MboI GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
MboII GAAGA 9 cut(s) 18, 109, 182, 1328, 1503, 1522, 1613, 1721, 1807
MhlI GDGCHC 2 cut(s) 87, 99
MluCI AATT 4 cut(s) 355, 870, 1073, 1798
MlyI GAGTC 2 cut(s) 234, 242
MmeI TCCRAC 3 cut(s) 183, 275, 1511
Mph1103I ATGCAT 1 cut(s) 1050
MroXI GAANNNNTTC 1 cut(s) 491
MseI TTAA 5 cut(s) 35, 552, 1164, 1515, 1619
MslI CAYNNNNRTG 4 cut(s) 420, 1053, 1362, 1694
MspA1I CMGCKG 2 cut(s) 237, 787
MspI CCGG 3 cut(s) 93, 995, 1664
MspR9I CCNGG 3 cut(s) 94, 935, 1527
Mva1269I GAATGC 3 cut(s) 996, 1121, 1353
MvaI CCWGG 2 cut(s) 935, 1527
MvnI CGCG 2 cut(s) 237, 533
MwoI GCNNNNNNNGC 3 cut(s) 530, 674, 1040
NciI CCSGG 1 cut(s) 94
NdeII GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
NheI GCTAGC 1 cut(s) 812
NmuCI GTSAC 1 cut(s) 145
NsbI TGCGCA 2 cut(s) 738, 843
NsiI ATGCAT 1 cut(s) 1050
NspI RCATGY 1 cut(s) 292
PceI AGGCCT 1 cut(s) 1108
PciSI GCTCTTC 1 cut(s) 31
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 3 cut(s) 996, 1121, 1353
PdmI GAANNNNTTC 1 cut(s) 491
PfeI GAWTC 2 cut(s) 900, 1712
PfoI TCCNGGA 1 cut(s) 933
PkrI GCNGC 8 cut(s) 182, 349, 352, 1036, 1456, 1459, 1483, 1886
Ple19I CGATCG 1 cut(s) 315
PleI GAGTC 2 cut(s) 234, 242
PpsI GAGTC 2 cut(s) 234, 242
Ppu21I YACGTR 1 cut(s) 643
PshAI GACNNNNGTC 1 cut(s) 291
Psp6I CCWGG 2 cut(s) 933, 1525
PspFI CCCAGC 1 cut(s) 1154
PspGI CCWGG 2 cut(s) 933, 1525
PstI CTGCAG 3 cut(s) 1085, 1275, 1462
PvuI CGATCG 1 cut(s) 315
RsaI GTAC 4 cut(s) 221, 718, 944, 1253
RsaNI GTAC 4 cut(s) 220, 717, 943, 1252
RseI CAYNNNNRTG 4 cut(s) 420, 1053, 1362, 1694
SacII CCGCGG 1 cut(s) 238
SapI GCTCTTC 1 cut(s) 31
SaqAI TTAA 5 cut(s) 35, 552, 1164, 1515, 1619
SatI GCNGC 8 cut(s) 181, 348, 351, 1035, 1455, 1458, 1482, 1885
Sau3AI GATC 6 cut(s) 312, 590, 1116, 1493, 1593, 1856
ScaI AGTACT 1 cut(s) 718
SchI GAGTC 2 cut(s) 234, 242
ScrFI CCNGG 3 cut(s) 94, 935, 1527
SduI GDGCHC 2 cut(s) 87, 99
SfaNI GCATC 2 cut(s) 369, 678
SfcI CTRYAG 5 cut(s) 782, 1081, 1271, 1458, 1852
Sfr303I CCGCGG 1 cut(s) 238
SgrBI CCGCGG 1 cut(s) 238
SmiMI CAYNNNNRTG 4 cut(s) 420, 1053, 1362, 1694
SmlI CTYRAG 3 cut(s) 341, 659, 817
SmoI CTYRAG 3 cut(s) 341, 659, 817
Sse9I AATT 4 cut(s) 355, 870, 1073, 1798
SseBI AGGCCT 1 cut(s) 1108
SspI AATATT 2 cut(s) 625, 1181
SspMI CTAG 1 cut(s) 813
StuI AGGCCT 1 cut(s) 1108
StyD4I CCNGG 3 cut(s) 92, 933, 1525
StyI CCWWGG 2 cut(s) 111, 599
TaaI ACNGT 5 cut(s) 1235, 1256, 1730, 1820, 1828
TaiI ACGT 3 cut(s) 215, 645, 1479
TaqI TCGA 7 cut(s) 99, 168, 315, 495, 908, 1025, 1258
TaqII GACCGA 1 cut(s) 325
TasI AATT 4 cut(s) 355, 870, 1073, 1798
TatI WGTACW 3 cut(s) 219, 716, 942
TauI GCSGC 4 cut(s) 183, 350, 353, 1887
TfiI GAWTC 2 cut(s) 900, 1712
Tru1I TTAA 5 cut(s) 35, 552, 1164, 1515, 1619
Tru9I TTAA 5 cut(s) 35, 552, 1164, 1515, 1619
TscAI CASTG 4 cut(s) 143, 699, 1722, 1833
TseFI GTSAC 1 cut(s) 145
TseI GCWGC 4 cut(s) 1034, 1454, 1457, 1481
Tsp45I GTSAC 1 cut(s) 145
TspGWI ACGGA 1 cut(s) 499
TspRI CASTG 4 cut(s) 143, 699, 1722, 1833
VneI GTGCAC 1 cut(s) 83
XapI RAATTY 2 cut(s) 870, 1798
XceI RCATGY 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 1245
XmnI GAANNNNTTC 1 cut(s) 491
XspI CTAG 1 cut(s) 813
ZrmI AGTACT 1 cut(s) 718
Zsp2I ATGCAT 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.