Inactive leucine-rich repeat receptor-like protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0184881 RchiOBHm_Chr7g0184901 |
| rosa_samantha | Rh7AG077300 Rh7CG070900 Rh7DG070200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 183 |
| AclWI | GGATC | 1 cut(s) | 147 |
| AcsI | RAATTY | 4 cut(s) | 46, 129, 336, 414 |
| AgsI | TTSAA | 5 cut(s) | 359, 413, 442, 486, 514 |
| AluBI | AGCT | 5 cut(s) | 61, 94, 285, 409, 495 |
| AluI | AGCT | 5 cut(s) | 61, 94, 285, 409, 495 |
| AlwI | GGATC | 1 cut(s) | 147 |
| AoxI | GGCC | 2 cut(s) | 10, 240 |
| ApeKI | GCWGC | 2 cut(s) | 282, 395 |
| ApoI | RAATTY | 4 cut(s) | 46, 129, 336, 414 |
| AspS9I | GGNCC | 1 cut(s) | 518 |
| AsuHPI | GGTGA | 2 cut(s) | 47, 415 |
| AvaII | GGWCC | 1 cut(s) | 518 |
| BbvI | GCAGC | 2 cut(s) | 294, 382 |
| BccI | CCATC | 1 cut(s) | 73 |
| BciVI | GTATCC | 1 cut(s) | 123 |
| BfaI | CTAG | 1 cut(s) | 498 |
| BfmI | CTRYAG | 2 cut(s) | 89, 147 |
| BfuI | GTATCC | 1 cut(s) | 123 |
| BisI | GCNGC | 2 cut(s) | 283, 396 |
| BlsI | GCNGC | 2 cut(s) | 284, 397 |
| Bme18I | GGWCC | 1 cut(s) | 518 |
| BmgT120I | GGNCC | 1 cut(s) | 518 |
| BmsI | GCATC | 1 cut(s) | 13 |
| Bpu10I | CCTNAGC | 1 cut(s) | 95 |
| BsaJI | CCNNGG | 1 cut(s) | 386 |
| Bse1I | ACTGG | 1 cut(s) | 508 |
| Bse3DI | GCAATG | 1 cut(s) | 405 |
| BseDI | CCNNGG | 1 cut(s) | 386 |
| BseMI | GCAATG | 1 cut(s) | 405 |
| BseMII | CTCAG | 2 cut(s) | 231, 310 |
| BseNI | ACTGG | 1 cut(s) | 508 |
| BseXI | GCAGC | 2 cut(s) | 294, 382 |
| BshFI | GGCC | 2 cut(s) | 12, 242 |
| BslFI | GGGAC | 1 cut(s) | 365 |
| BsmFI | GGGAC | 1 cut(s) | 365 |
| BsnI | GGCC | 2 cut(s) | 12, 242 |
| Bsp143I | GATC | 1 cut(s) | 139 |
| BspANI | GGCC | 2 cut(s) | 12, 242 |
| BspCNI | CTCAG | 2 cut(s) | 230, 309 |
| BspPI | GGATC | 1 cut(s) | 147 |
| BsrDI | GCAATG | 1 cut(s) | 405 |
| BsrI | ACTGG | 1 cut(s) | 508 |
| BssECI | CCNNGG | 1 cut(s) | 386 |
| BssMI | GATC | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 386 |
| Bst4CI | ACNGT | 2 cut(s) | 268, 451 |
| BstDEI | CTNAG | 6 cut(s) | 95, 217, 278, 296, 491, 532 |
| BstKTI | GATC | 1 cut(s) | 142 |
| BstMBI | GATC | 1 cut(s) | 139 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 91, 100 |
| BstNSI | RCATGY | 1 cut(s) | 195 |
| BstSFI | CTRYAG | 2 cut(s) | 89, 147 |
| BstV1I | GCAGC | 2 cut(s) | 294, 382 |
| BsuI | GTATCC | 1 cut(s) | 123 |
| BsuRI | GGCC | 2 cut(s) | 12, 242 |
| BtsIMutI | CAGTG | 1 cut(s) | 447 |
| Cfr13I | GGNCC | 1 cut(s) | 518 |
| CviAII | CATG | 3 cut(s) | 35, 192, 522 |
| CviJI | RGCY | 8 cut(s) | 12, 61, 94, 242, 285, 409, 495, 507 |
| CviKI_1 | RGCY | 8 cut(s) | 12, 61, 94, 242, 285, 409, 495, 507 |
| DdeI | CTNAG | 6 cut(s) | 95, 217, 278, 296, 491, 532 |
| DpnI | GATC | 1 cut(s) | 141 |
| DpnII | GATC | 1 cut(s) | 139 |
| DraI | TTTAAA | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 1 cut(s) | 386 |
| Eco147I | AGGCCT | 2 cut(s) | 12, 242 |
| Eco47I | GGWCC | 1 cut(s) | 518 |
| EcoT14I | CCWWGG | 1 cut(s) | 386 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 386 |
| FaeI | CATG | 3 cut(s) | 38, 195, 525 |
| FaqI | GGGAC | 1 cut(s) | 365 |
| FatI | CATG | 3 cut(s) | 34, 191, 521 |
| FauNDI | CATATG | 1 cut(s) | 172 |
| FblI | GTMKAC | 1 cut(s) | 183 |
| Fnu4HI | GCNGC | 2 cut(s) | 283, 396 |
| Fsp4HI | GCNGC | 2 cut(s) | 283, 396 |
| FspBI | CTAG | 1 cut(s) | 498 |
| GluI | GCNGC | 2 cut(s) | 283, 396 |
| HaeIII | GGCC | 2 cut(s) | 12, 242 |
| Hin1II | CATG | 3 cut(s) | 38, 195, 525 |
| HincII | GTYRAC | 1 cut(s) | 348 |
| HindII | GTYRAC | 1 cut(s) | 348 |
| HindIII | AAGCTT | 1 cut(s) | 407 |
| HinfI | GANTC | 3 cut(s) | 215, 221, 318 |
| HphI | GGTGA | 2 cut(s) | 47, 415 |
| Hpy166II | GTNNAC | 3 cut(s) | 184, 348, 470 |
| Hpy188I | TCNGA | 3 cut(s) | 220, 238, 331 |
| Hpy188III | TCNNGA | 3 cut(s) | 365, 439, 498 |
| Hpy8I | GTNNAC | 3 cut(s) | 184, 348, 470 |
| HpyAV | CCTTC | 2 cut(s) | 130, 253 |
| HpyCH4III | ACNGT | 2 cut(s) | 268, 451 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 176, 398 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 91, 100 |
| HpyF3I | CTNAG | 6 cut(s) | 95, 217, 278, 296, 491, 532 |
| Hsp92II | CATG | 3 cut(s) | 38, 195, 525 |
| Kzo9I | GATC | 1 cut(s) | 139 |
| LpnPI | CCDG | 5 cut(s) | 71, 307, 350, 404, 521 |
| Lsp1109I | GCAGC | 2 cut(s) | 294, 382 |
| LweI | GCATC | 1 cut(s) | 13 |
| MaeI | CTAG | 1 cut(s) | 498 |
| MaeIII | GTNAC | 2 cut(s) | 53, 262 |
| MalI | GATC | 1 cut(s) | 141 |
| MboI | GATC | 1 cut(s) | 139 |
| MboII | GAAGA | 2 cut(s) | 60, 159 |
| MfeI | CAATTG | 2 cut(s) | 122, 457 |
| MluCI | AATT | 8 cut(s) | 46, 122, 129, 210, 336, 414, 433, 457 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MnlI | CCTC | 4 cut(s) | 23, 232, 305, 393 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 1 cut(s) | 107 |
| MunI | CAATTG | 2 cut(s) | 122, 457 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 91, 100 |
| NdeI | CATATG | 1 cut(s) | 172 |
| NdeII | GATC | 1 cut(s) | 139 |
| NlaIII | CATG | 3 cut(s) | 38, 195, 525 |
| NmuCI | GTSAC | 1 cut(s) | 53 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 195 |
| PceI | AGGCCT | 2 cut(s) | 12, 242 |
| PfeI | GAWTC | 2 cut(s) | 221, 318 |
| PkrI | GCNGC | 2 cut(s) | 284, 397 |
| PleI | GAGTC | 1 cut(s) | 209 |
| PpsI | GAGTC | 1 cut(s) | 209 |
| PspPI | GGNCC | 1 cut(s) | 518 |
| SaqAI | TTAA | 1 cut(s) | 107 |
| SatI | GCNGC | 2 cut(s) | 283, 396 |
| Sau3AI | GATC | 1 cut(s) | 139 |
| Sau96I | GGNCC | 1 cut(s) | 518 |
| SchI | GAGTC | 1 cut(s) | 209 |
| SetI | ASST | 8 cut(s) | 63, 96, 207, 287, 347, 411, 497, 520 |
| SfaNI | GCATC | 1 cut(s) | 13 |
| SfcI | CTRYAG | 2 cut(s) | 89, 147 |
| SinI | GGWCC | 1 cut(s) | 518 |
| Sse9I | AATT | 8 cut(s) | 46, 122, 129, 210, 336, 414, 433, 457 |
| SseBI | AGGCCT | 2 cut(s) | 12, 242 |
| SspMI | CTAG | 1 cut(s) | 498 |
| StuI | AGGCCT | 2 cut(s) | 12, 242 |
| StyI | CCWWGG | 1 cut(s) | 386 |
| TaaI | ACNGT | 2 cut(s) | 268, 451 |
| TaqI | TCGA | 1 cut(s) | 7 |
| TasI | AATT | 8 cut(s) | 46, 122, 129, 210, 336, 414, 433, 457 |
| TfiI | GAWTC | 2 cut(s) | 221, 318 |
| Tru1I | TTAA | 1 cut(s) | 107 |
| Tru9I | TTAA | 1 cut(s) | 107 |
| TscAI | CASTG | 1 cut(s) | 454 |
| TseFI | GTSAC | 1 cut(s) | 53 |
| TseI | GCWGC | 2 cut(s) | 282, 395 |
| Tsp45I | GTSAC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 3 cut(s) | 23, 159, 329 |
| TspRI | CASTG | 1 cut(s) | 454 |
| VpaK11BI | GGWCC | 1 cut(s) | 518 |
| XapI | RAATTY | 4 cut(s) | 46, 129, 336, 414 |
| XbaI | TCTAGA | 1 cut(s) | 497 |
| XceI | RCATGY | 1 cut(s) | 195 |
| XmiI | GTMKAC | 1 cut(s) | 183 |
| XspI | CTAG | 1 cut(s) | 498 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |