Core histone H2A/H2B/H3/H4
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0252291 RchiOBHm_Chr6g0297691 RchiOBHm_Chr7g0202341 |
| rosa_laevigata | RLG00000015397 |
| rosa_multiflora | Rmu_sc0006252.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00315650 |
| rosa_rugosa | Rorug06G0218200.1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcvI | CACGTG | 1 cut(s) | 198 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 78, 79, 92, 123 |
| AgsI | TTSAA | 1 cut(s) | 164 |
| AjnI | CCWGG | 1 cut(s) | 117 |
| AluBI | AGCT | 2 cut(s) | 33, 109 |
| AluI | AGCT | 2 cut(s) | 33, 109 |
| AoxI | GGCC | 2 cut(s) | 3, 81 |
| ApaI | GGGCCC | 1 cut(s) | 85 |
| ApeKI | GCWGC | 2 cut(s) | 33, 68 |
| AspS9I | GGNCC | 3 cut(s) | 4, 81, 82 |
| AsuC2I | CCSGG | 1 cut(s) | 73 |
| BaeGI | GKGCMC | 1 cut(s) | 85 |
| BanII | GRGCYC | 1 cut(s) | 85 |
| BbrPI | CACGTG | 1 cut(s) | 198 |
| BbvI | GCAGC | 2 cut(s) | 20, 55 |
| BciT130I | CCWGG | 1 cut(s) | 119 |
| BcnI | CCSGG | 1 cut(s) | 73 |
| BfaI | CTAG | 2 cut(s) | 30, 202 |
| BisI | GCNGC | 2 cut(s) | 34, 69 |
| BlsI | GCNGC | 2 cut(s) | 35, 70 |
| Bme1390I | CCNGG | 2 cut(s) | 73, 119 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 81, 82 |
| BmiI | GGNNCC | 3 cut(s) | 42, 83, 84 |
| BmrFI | CCNGG | 2 cut(s) | 73, 119 |
| BpuMI | CCSGG | 1 cut(s) | 73 |
| BsaAI | YACGTR | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 3 cut(s) | 44, 117, 183 |
| BsaWI | WCCGGW | 1 cut(s) | 92 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 78, 79, 92, 123 |
| Bse1I | ACTGG | 1 cut(s) | 60 |
| BseBI | CCWGG | 1 cut(s) | 119 |
| BseDI | CCNNGG | 3 cut(s) | 44, 117, 183 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 78, 79, 92, 123 |
| BseNI | ACTGG | 1 cut(s) | 60 |
| BseSI | GKGCMC | 1 cut(s) | 85 |
| BseXI | GCAGC | 2 cut(s) | 20, 55 |
| BshFI | GGCC | 2 cut(s) | 5, 83 |
| BsiSI | CCGG | 2 cut(s) | 73, 93 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 78, 79, 92, 123 |
| BsnI | GGCC | 2 cut(s) | 5, 83 |
| Bsp120I | GGGCCC | 1 cut(s) | 81 |
| Bsp1286I | GDGCHC | 1 cut(s) | 85 |
| BspANI | GGCC | 2 cut(s) | 5, 83 |
| BspLI | GGNNCC | 3 cut(s) | 42, 83, 84 |
| BsrI | ACTGG | 1 cut(s) | 60 |
| BssECI | CCNNGG | 3 cut(s) | 44, 117, 183 |
| BssT1I | CCWWGG | 1 cut(s) | 183 |
| Bst2UI | CCWGG | 1 cut(s) | 119 |
| Bst4CI | ACNGT | 1 cut(s) | 126 |
| BstBAI | YACGTR | 1 cut(s) | 198 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 65 |
| BstNI | CCWGG | 1 cut(s) | 119 |
| BstSCI | CCNGG | 2 cut(s) | 71, 117 |
| BstSLI | GKGCMC | 1 cut(s) | 85 |
| BstV1I | GCAGC | 2 cut(s) | 20, 55 |
| BsuRI | GGCC | 2 cut(s) | 5, 83 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 81, 82 |
| CviJI | RGCY | 7 cut(s) | 5, 33, 41, 68, 83, 109, 130 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 33, 41, 68, 83, 109, 130 |
| Eco130I | CCWWGG | 1 cut(s) | 183 |
| Eco24I | GRGCYC | 1 cut(s) | 85 |
| Eco72I | CACGTG | 1 cut(s) | 198 |
| EcoO109I | RGGNCCY | 1 cut(s) | 82 |
| EcoRII | CCWGG | 1 cut(s) | 117 |
| EcoT14I | CCWWGG | 1 cut(s) | 183 |
| EcoT38I | GRGCYC | 1 cut(s) | 85 |
| ErhI | CCWWGG | 1 cut(s) | 183 |
| FaiI | YATR | 2 cut(s) | 9, 179 |
| Fnu4HI | GCNGC | 2 cut(s) | 34, 69 |
| FriOI | GRGCYC | 1 cut(s) | 85 |
| Fsp4HI | GCNGC | 2 cut(s) | 34, 69 |
| FspBI | CTAG | 2 cut(s) | 30, 202 |
| GluI | GCNGC | 2 cut(s) | 34, 69 |
| HaeIII | GGCC | 2 cut(s) | 5, 83 |
| HapII | CCGG | 2 cut(s) | 73, 93 |
| HpaII | CCGG | 2 cut(s) | 73, 93 |
| Hpy166II | GTNNAC | 1 cut(s) | 19 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 145 |
| Hpy8I | GTNNAC | 1 cut(s) | 19 |
| Hpy99I | CGWCG | 1 cut(s) | 64 |
| HpyAV | CCTTC | 1 cut(s) | 58 |
| HpyCH4III | ACNGT | 1 cut(s) | 126 |
| HpyCH4IV | ACGT | 1 cut(s) | 197 |
| HpyCH4V | TGCA | 1 cut(s) | 36 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 65 |
| HpySE526I | ACGT | 1 cut(s) | 197 |
| LmnI | GCTCC | 1 cut(s) | 46 |
| LpnPI | CCDG | 5 cut(s) | 41, 86, 104, 106, 131 |
| Lsp1109I | GCAGC | 2 cut(s) | 20, 55 |
| MaeI | CTAG | 2 cut(s) | 30, 202 |
| MaeII | ACGT | 1 cut(s) | 197 |
| MaeIII | GTNAC | 1 cut(s) | 169 |
| MhlI | GDGCHC | 1 cut(s) | 85 |
| MluCI | AATT | 1 cut(s) | 174 |
| MnlI | CCTC | 3 cut(s) | 39, 89, 96 |
| MslI | CAYNNNNRTG | 1 cut(s) | 176 |
| MspI | CCGG | 2 cut(s) | 73, 93 |
| MspR9I | CCNGG | 2 cut(s) | 73, 119 |
| MvaI | CCWGG | 1 cut(s) | 119 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 65 |
| NciI | CCSGG | 1 cut(s) | 73 |
| NlaIV | GGNNCC | 3 cut(s) | 42, 83, 84 |
| NmuCI | GTSAC | 1 cut(s) | 169 |
| PkrI | GCNGC | 2 cut(s) | 35, 70 |
| PmaCI | CACGTG | 1 cut(s) | 198 |
| PmlI | CACGTG | 1 cut(s) | 198 |
| Ppu21I | YACGTR | 1 cut(s) | 198 |
| Psp6I | CCWGG | 1 cut(s) | 117 |
| PspCI | CACGTG | 1 cut(s) | 198 |
| PspGI | CCWGG | 1 cut(s) | 117 |
| PspN4I | GGNNCC | 3 cut(s) | 42, 83, 84 |
| PspOMI | GGGCCC | 1 cut(s) | 81 |
| PspPI | GGNCC | 3 cut(s) | 4, 81, 82 |
| RseI | CAYNNNNRTG | 1 cut(s) | 176 |
| SatI | GCNGC | 2 cut(s) | 34, 69 |
| Sau96I | GGNCC | 3 cut(s) | 4, 81, 82 |
| ScrFI | CCNGG | 2 cut(s) | 73, 119 |
| SduI | GDGCHC | 1 cut(s) | 85 |
| SetI | ASST | 3 cut(s) | 35, 111, 200 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 176 |
| Sse9I | AATT | 1 cut(s) | 174 |
| SspMI | CTAG | 2 cut(s) | 30, 202 |
| StyD4I | CCNGG | 2 cut(s) | 71, 117 |
| StyI | CCWWGG | 1 cut(s) | 183 |
| TaaI | ACNGT | 1 cut(s) | 126 |
| TaiI | ACGT | 1 cut(s) | 200 |
| TasI | AATT | 1 cut(s) | 174 |
| TseFI | GTSAC | 1 cut(s) | 169 |
| TseI | GCWGC | 2 cut(s) | 33, 68 |
| Tsp45I | GTSAC | 1 cut(s) | 169 |
| TspGWI | ACGGA | 2 cut(s) | 26, 124 |
| XspI | CTAG | 2 cut(s) | 30, 202 |