Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015633

Physical Location & Seq

Genomic Coordinates Reverse (-)

29752083 .. 29758393

Gene Structure 6311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19014

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGTCAGAAAGTGCAGTCAGCTTTCTACTGAACAAGATTTCTCCTTTTCTCGCAAATGGAGTTCAACTCTGGAGAGGGGTTAGAGAAGAACTCATTTACCTAAATGGGGAATTGGAGCACATGAAGGCCTTTCTGAAGAATGCAGACGCAATGGAAGAAAGTGATGAAGAACTCAAAGTATGGGTTAAGCAGATACGAGATGTTGCTCATGATGCAGAAGATGTTATAGATGAATTTACACTCCTCCAAACACATAACAATCATGTGCACCAACTATATTGTACTTTAGACTTGCTTTCTTGCTGTGTTAAGAACCTGAAAGCTTATTATCGGGTTGCCAAGGAGTTACAGAGCATCAACACCCGGATCAAAGAGATCTTTGCTGTGCAAAAAAGACTTCTTCCTAAACTTGATGCTGCTGCAAACGGCTCCATTTTTACCAGTTCAGGTAGCACATGGCATGATCGGCGAGAGGATGCTCTTCTTTTAGACAATACTGATGTTGTGGGCATAGACGAGCCGAAAAACCTACTGGTCAGCCGGCTGGTCAAGGGTGACTCTGGACGTGAAGTAGTTTCAGTGACAGGAATGGGTGGTATGGGGAAAACCACCTTGGTGAAGAAAGTCTATGATGATGTGGAAGTGAAGAAACGTTTCAAACCCCGTGCGTGGATCACAGTTTCTCAGTCTTTTGAAGCACAGGATCTCCTTAGAGACATCATTCGCAAACTCTATTCAGAATTTGGGAGGGCTGTTCCAGAAGGTGTAGATGGCATGAATAACAATAAATTGAAAGAGAGAATCAAAAACTTGCTGCAAAAAAGGAGGTACCTGATTGTTCTTGATGATGTCTGGCACACCAATGTATGGGAGACTGTCAAATATGCTTTTCCTAATGGGAAGCTTGGCAGCAGAGTCATGATCACTACACGTAAATCTGATGTAGCATCCACCTCTTGCTCAGAATCCGAAGGTCATATCCATGAGGTGAAACCCTTGGGTGCAAAGGAGTCTTGGAGTCTGTTCAGTAGGAAGGCATTTCGGGGGAAGTCATGCCCTTCTTATTTGAAATCATTCTGTAAAGATATCCTAAAAAAGTGTGAGGGTTTGCCCCTTGCAATTGTAGCAATAAGTGGTGTTTTGGCAACAAAAGACTGCCGCAGAATAGATGAGTGGGATTTGATTTGCCGTAGTCTTGGAGCTGAAATTCATGGCAATGATAAACTTGAGGATTTGAAGAAAGTCCTTTCTCTCAGTTTTAATGATTTGCCTTATAATCTGAAGGCATGTTTTTTGTGCTTGAGCGTCTTTCCAGAGGGCCATCTGATTAAGCATATGAAAATCATTCGCGTATGGATAGCAGAAAGATTTGTTGAAGCTAGAGAAGGAAGAACATTGGAGGAAGTAGCTGAGGACTACCTCAAGGAGCTGTTGAACAGAAGTTTGATGCTTGTGGGAGACACAACAAGTGATGGAAGGGTCAAAACTTACCGCATCCATGACCTTTTGCGAGAGATTATTGTCTCAAAATCAAGGGATCAAAACTTTGCAGCCATAATGAAGGAGCACAACACAATCTGGCCTGATAGAGTTCGGCGCTTGTCAATACATAATGTATTGCAAACTGTACAACAAAGCAGGTCATTTCCTCAACTTCGTTCCTTGTTTATGTTTGGGGCGGTTTCAAGGTCATCCATGCATAAAAATCTTTCCAATGGCTTTAGGTTGCTTAGGGTGTTAGATATAGAAGCTGCACCTATAAAGACATTTCCAAGAGAAATCATTGACCTGTTTTATTTAAGTTATCTAAGCTTGAGGAACACTCAGGTGAAAGTCATTCCCAGAAGCATAGGGAATCTGCAGAACCTGGAGACATTGGATCTTAAAAAGACTTATGTCTCTGAGTTGCCTGTTGAGATATTAAAGCTCCAAAAACTTCGCCACCTCCTGGTTTATCATCTTAAGATTGAATCTTATGCACACTTTTATTCCAAGTTTGGCTTTAAGGTCCTCTCAAGTATAGGAGATCTTCTGTCCCTGCAAAAGCTCTGTTTTATTGAGGCAAATCAAGGTTGTGGAATGACAGTCAGGGAGTTAGCTAAGCTCAAGCAACTTAGGAGGTTGGGAATTATAAAATTGAGAAAAGAAGATGGATTAGCTTTGTGCTTATCGCTCAAAAGTTTGACCAAGCTGCGTTCATTTTCTGTAAATTCTGCAGGAGAGAATGAGATAATTGATCTCCAACACCTGTCTTCCCCTCCTCCGTTTCTTGAACGACTATACCTGACAGGTCGTTTGGAAGAGTTACCAAGTTGGATACCTTCACTGCATAGCTTGGTTAAGTTATTTTTGAAGTGGAGTCAATTAAAGGATGACCCGATGGTACTTCTTCAAGATTTGCCGAATCTTGTTCATCTTGAATTGCTTCATACTTGTGATAGTGACATGTTGTCATTTAAGGGTGGGGGATTTAAAAAGCTTAAGGTATTGGGTCTTGACAAATTTGACAAGCTCAGTTGTGTGAAGGTGGAGAAGGGAGCAATGCCATGCCTTGAAAGGCTGACAATCCAACGATGCAAGTTGTTGAAGAGGGTACCATCAGGAGTTGAAAACCTTACCAAACTAAAATCACTTCAGTTCTTTGACATGCCGTATGAATTAATCTCAAAACTGCGGCCAGATGGGGAAGGTGAGGATTATGGAGAAGTAGCACATATCCCGGAAGTTTATTCTGCATACTGGAGAGATGGTGGTTGGGATGTCTATCCAATTGAGAGTTTCAAGGAGATAGAAAATAGTCCCTCACCAGCTGGTACTGTTAGGAGAAGCCATAAACTTCGTCCTCTATGGAAGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009814 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0043207 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:0098542 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

952

Amino Acids

108.87

Weight (kDa)

9.13

Isoelectric Point (pI)

45.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 87	6.1e-26	Rx N-terminal domain
NB-ARC	PF00931	174 - 351	1.4e-45	NB-ARC domain
AAA_16	PF13191	185 - 284	5.7e-06	AAA ATPase domain
WHD_DRP	PF23559	436 - 507	1.2e-20	Disease resistance protein Winged helix domain
LRR_14	PF23598	551 - 880	7.9e-48	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015633)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g23430 FvH4_5g23430 FvH4_5g23430
malus_domestica	MD06G1024300.v1.1
prunus_persica	Prupe.5G025300_v2.0.a1 Prupe.5G025300_v2.0.a1
pyrus_communis	pycom06g01970
rosa_chinensis	RchiOBHm_Chr7g0212491
rosa_multiflora	Rmu_sc0007576.1_g000013
rosa_roxburghii	Rroxscaffold_3G00246750
rosa_rugosa	Rorug07G0134600 Rorug07G0134800
rosa_samantha	Rh7BG261400 Rh7CG284200 Rh7DG274100
rosa_wichuraiana	Rw7G022880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1275, 2132
Acc36I	ACCTGC	1 cut(s)	1629
Acc65I	GGTACC	2 cut(s)	828, 2593
AccB1I	GGYRCC	2 cut(s)	828, 2593
AccB7I	CCANNNNNTGG	2 cut(s)	867, 1948
AccII	CGCG	1 cut(s)	1350
AciI	CCGC	4 cut(s)	1159, 1492, 1679, 2674
AclI	AACGTT	1 cut(s)	652
AclWI	GGATC	5 cut(s)	374, 680, 711, 1545, 1887
AcoI	YGGCCR	1 cut(s)	2675
AcsI	RAATTY	5 cut(s)	233, 740, 1206, 2209, 2501
AcuI	CTGAAG	3 cut(s)	155, 1301, 2618
AfaI	GTAC	6 cut(s)	283, 830, 1629, 2385, 2595, 2815
AfiI	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
AflII	CTTAAG	2 cut(s)	1961, 2480
AflIII	ACRYGT	2 cut(s)	929, 2445
AhdI	GACNNNNNGTC	1 cut(s)	2449
AjiI	CACGTC	1 cut(s)	566
AjnI	CCWGG	2 cut(s)	1866, 1947
AjuI	GAANNNNNNNTTGG	2 cut(s)	596, 628
AleI	CACNNNNGTG	2 cut(s)	614, 1826
Alw21I	GWGCWC	3 cut(s)	120, 270, 1569
Alw26I	GTCTC	6 cut(s)	708, 866, 1452, 1528, 1865, 1903
Alw44I	GTGCAC	1 cut(s)	266
AlwI	GGATC	5 cut(s)	374, 680, 711, 1545, 1887
AlwNI	CAGNNNCTG	1 cut(s)	1867
AoxI	GGCC	4 cut(s)	126, 1318, 1580, 2675
ApaLI	GTGCAC	1 cut(s)	266
ApeKI	GCWGC	7 cut(s)	416, 419, 814, 909, 1550, 1751, 2191
ApoI	RAATTY	5 cut(s)	233, 740, 1206, 2209, 2501
ArsI	GACNNNNNNTTYG	2 cut(s)	2278, 2310
AseI	ATTAAT	1 cut(s)	2660
Asp700I	GAANNNNTTC	3 cut(s)	653, 1073, 2424
Asp718I	GGTACC	2 cut(s)	828, 2593
AspLEI	GCGC	1 cut(s)	1599
AspS9I	GGNCC	2 cut(s)	1318, 2008
AsuC2I	CCSGG	2 cut(s)	364, 2720
AsuHPI	GGTGA	6 cut(s)	566, 628, 1000, 1840, 2702, 2796
AvaII	GGWCC	1 cut(s)	2008
BaeGI	GKGCMC	1 cut(s)	270
BanI	GGYRCC	2 cut(s)	828, 2593
BbsI	GAAGAC	1 cut(s)	2244
Bbv12I	GWGCWC	3 cut(s)	120, 270, 1569
BbvCI	CCTCAGC	1 cut(s)	1410
BbvI	GCAGC	7 cut(s)	403, 406, 801, 921, 1562, 1738, 2178
BccI	CCATC	8 cut(s)	764, 1329, 1466, 2144, 2374, 2605, 2675, 2741
BceAI	ACGGC	3 cut(s)	442, 1173, 2635
BciT130I	CCWGG	2 cut(s)	1868, 1949
BciVI	GTATCC	1 cut(s)	2310
BclI	TGATCA	1 cut(s)	921
BcnI	CCSGG	2 cut(s)	364, 2720
BcoDI	GTCTC	6 cut(s)	708, 866, 1452, 1528, 1865, 1903
BfaI	CTAG	1 cut(s)	1380
BfmI	CTRYAG	2 cut(s)	1859, 2214
BfoI	RGCGCY	1 cut(s)	1600
BfrI	CTTAAG	2 cut(s)	1961, 2480
BfuAI	ACCTGC	1 cut(s)	1629
BfuI	GTATCC	1 cut(s)	2310
BglII	AGATCT	2 cut(s)	375, 2026
BisI	GCNGC	9 cut(s)	417, 420, 815, 910, 1159, 1551, 1752, 2192, 2675
BlpI	GCTNAGC	1 cut(s)	2100
BlsI	GCNGC	9 cut(s)	418, 421, 816, 911, 1160, 1552, 1753, 2193, 2676
Bme1390I	CCNGG	4 cut(s)	364, 1868, 1949, 2720
Bme18I	GGWCC	1 cut(s)	2008
BmeRI	GACNNNNNGTC	1 cut(s)	2449
BmgBI	CACGTC	1 cut(s)	566
BmgT120I	GGNCC	2 cut(s)	1318, 2008
BmiI	GGNNCC	3 cut(s)	430, 830, 2595
BmrFI	CCNGG	4 cut(s)	364, 1868, 1949, 2720
BmsI	GCATC	8 cut(s)	202, 363, 403, 466, 956, 1437, 1503, 2564
BoxI	GACNNNNGTC	1 cut(s)	1895
BpiI	GAAGAC	1 cut(s)	2244
BplI	GAGNNNNNCTC	6 cut(s)	51, 83, 75, 107, 1807, 1839
BpmI	CTGGAG	3 cut(s)	91, 1889, 2761
Bpu10I	CCTNAGC	2 cut(s)	1410, 1730
Bpu1102I	GCTNAGC	1 cut(s)	2100
BpuEI	CTTGAG	6 cut(s)	1247, 1321, 1406, 1834, 1999, 2090
BpuMI	CCSGG	2 cut(s)	364, 2720
BsaAI	YACGTR	1 cut(s)	932
BsaBI	GATNNNNATC	1 cut(s)	2763
BsaJI	CCNNGG	3 cut(s)	339, 612, 996
BsaXI	ACNNNNNCTCC	4 cut(s)	690, 720, 2734, 2764
Bsc4I	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
Bse118I	RCCGGY	1 cut(s)	540
Bse1I	ACTGG	3 cut(s)	441, 537, 2744
Bse3DI	GCAATG	3 cut(s)	156, 1222, 2547
Bse8I	GATNNNNATC	1 cut(s)	2763
BseBI	CCWGG	2 cut(s)	1868, 1949
BseDI	CCNNGG	3 cut(s)	339, 612, 996
BseGI	GGATG	6 cut(s)	481, 947, 1494, 1691, 2377, 2764
BseJI	GATNNNNATC	1 cut(s)	2763
BseLI	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
BseMI	GCAATG	3 cut(s)	156, 1222, 2547
BseMII	CTCAG	7 cut(s)	698, 975, 1267, 1401, 1838, 1893, 2527
BseNI	ACTGG	3 cut(s)	441, 537, 2744
BseRI	GAGGAG	2 cut(s)	233, 2250
BseSI	GKGCMC	1 cut(s)	270
BseXI	GCAGC	7 cut(s)	403, 406, 801, 921, 1562, 1738, 2178
BsgI	GTGCAG	2 cut(s)	33, 1737
Bsh1236I	CGCG	1 cut(s)	1350
BshFI	GGCC	4 cut(s)	128, 1320, 1582, 2677
BshNI	GGYRCC	2 cut(s)	828, 2593
BsiHKAI	GWGCWC	3 cut(s)	120, 270, 1569
BsiSI	CCGG	3 cut(s)	364, 541, 2720
BslFI	GGGAC	2 cut(s)	2020, 2784
BslI	CCNNNNNNNGG	4 cut(s)	106, 669, 867, 1948
BsmAI	GTCTC	6 cut(s)	708, 866, 1452, 1528, 1865, 1903
BsmFI	GGGAC	2 cut(s)	2020, 2784
BsmI	GAATGC	1 cut(s)	145
BsnI	GGCC	4 cut(s)	128, 1320, 1582, 2677
Bsp1286I	GDGCHC	3 cut(s)	120, 270, 1569
Bsp1407I	TGTACA	1 cut(s)	1627
Bsp1720I	GCTNAGC	1 cut(s)	2100
BspACI	CCGC	4 cut(s)	1159, 1492, 1679, 2674
BspANI	GGCC	4 cut(s)	128, 1320, 1582, 2677
BspCNI	CTCAG	7 cut(s)	697, 974, 1266, 1402, 1837, 1894, 2526
BspFNI	CGCG	1 cut(s)	1350
BspHI	TCATGA	2 cut(s)	208, 918
BspLI	GGNNCC	3 cut(s)	430, 830, 2595
BspMAI	CTGCAG	2 cut(s)	1863, 2218
BspMI	ACCTGC	1 cut(s)	1629
BspPI	GGATC	5 cut(s)	374, 680, 711, 1545, 1887
BspQI	GCTCTTC	1 cut(s)	486
BspT107I	GGYRCC	2 cut(s)	828, 2593
BspTI	CTTAAG	2 cut(s)	1961, 2480
BsrDI	GCAATG	3 cut(s)	156, 1222, 2547
BsrFI	RCCGGY	1 cut(s)	540
BsrGI	TGTACA	1 cut(s)	1627
BsrI	ACTGG	3 cut(s)	441, 537, 2744
BssAI	RCCGGY	1 cut(s)	540
BssECI	CCNNGG	3 cut(s)	339, 612, 996
BssT1I	CCWWGG	3 cut(s)	339, 612, 996
Bst2UI	CCWGG	2 cut(s)	1868, 1949
Bst4CI	ACNGT	5 cut(s)	679, 877, 1627, 2086, 2818
Bst6I	CTCTTC	3 cut(s)	486, 2295, 2582
BstAFI	CTTAAG	2 cut(s)	1961, 2480
BstAUI	TGTACA	1 cut(s)	1627
BstBAI	YACGTR	1 cut(s)	932
BstC8I	GCNNGC	1 cut(s)	542
BstF5I	GGATG	6 cut(s)	481, 947, 1494, 1691, 2377, 2764
BstFNI	CGCG	1 cut(s)	1350
BstH2I	RGCGCY	1 cut(s)	1600
BstHHI	GCGC	1 cut(s)	1599
BstMAI	GTCTC	6 cut(s)	708, 866, 1452, 1528, 1865, 1903
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 466, 1124
BstNI	CCWGG	2 cut(s)	1868, 1949
BstNSI	RCATGY	3 cut(s)	1290, 2449, 2650
BstPAI	GACNNNNGTC	1 cut(s)	1895
BstSCI	CCNGG	4 cut(s)	362, 1866, 1947, 2718
BstSFI	CTRYAG	2 cut(s)	1859, 2214
BstSLI	GKGCMC	1 cut(s)	270
BstUI	CGCG	1 cut(s)	1350
BstV1I	GCAGC	7 cut(s)	403, 406, 801, 921, 1562, 1738, 2178
BstV2I	GAAGAC	1 cut(s)	2244
BstX2I	RGATCY	4 cut(s)	375, 703, 1879, 2026
BstYI	RGATCY	4 cut(s)	375, 703, 1879, 2026
BsuI	GTATCC	1 cut(s)	2310
BsuRI	GGCC	4 cut(s)	128, 1320, 1582, 2677
BtrI	CACGTC	1 cut(s)	566
BtsCI	GGATG	6 cut(s)	481, 947, 1494, 1691, 2377, 2764
BtsI	GCAGTG	1 cut(s)	2324
BtsIMutI	CAGTG	2 cut(s)	585, 2324
BveI	ACCTGC	1 cut(s)	1629
Cac8I	GCNNGC	1 cut(s)	542
CaiI	CAGNNNCTG	1 cut(s)	1867
CciI	TCATGA	2 cut(s)	208, 918
CfoI	GCGC	1 cut(s)	1599
Cfr10I	RCCGGY	1 cut(s)	540
Cfr13I	GGNCC	2 cut(s)	1318, 2008
CseI	GACGC	2 cut(s)	155, 1294
Csp6I	GTAC	6 cut(s)	282, 829, 1628, 2384, 2594, 2814
CviQI	GTAC	6 cut(s)	282, 829, 1628, 2384, 2594, 2814
DraI	TTTAAA	1 cut(s)	2473
DriI	GACNNNNNGTC	1 cut(s)	2449
EaeI	YGGCCR	1 cut(s)	2675
Eam1104I	CTCTTC	3 cut(s)	486, 2295, 2582
Eam1105I	GACNNNNNGTC	1 cut(s)	2449
EarI	CTCTTC	3 cut(s)	486, 2295, 2582
Eco130I	CCWWGG	3 cut(s)	339, 612, 996
Eco147I	AGGCCT	1 cut(s)	128
Eco32I	GATATC	1 cut(s)	1087
Eco47I	GGWCC	1 cut(s)	2008
Eco57I	CTGAAG	3 cut(s)	155, 1301, 2618
EcoO109I	RGGNCCY	1 cut(s)	2008
EcoRII	CCWGG	2 cut(s)	1866, 1947
EcoRV	GATATC	1 cut(s)	1087
EcoT14I	CCWWGG	3 cut(s)	339, 612, 996
EcoT22I	ATGCAT	1 cut(s)	1701
ErhI	CCWWGG	3 cut(s)	339, 612, 996
FalI	AAGNNNNNCTT	2 cut(s)	1985, 2017
FaqI	GGGAC	2 cut(s)	2020, 2784
FauNDI	CATATG	1 cut(s)	1335
FbaI	TGATCA	1 cut(s)	921
Fnu4HI	GCNGC	9 cut(s)	417, 420, 815, 910, 1159, 1551, 1752, 2192, 2675
FokI	GGATG	6 cut(s)	488, 934, 1481, 1678, 2384, 2771
Fsp4HI	GCNGC	9 cut(s)	417, 420, 815, 910, 1159, 1551, 1752, 2192, 2675
FspBI	CTAG	1 cut(s)	1380
GlaI	GCGC	1 cut(s)	1598
GluI	GCNGC	9 cut(s)	417, 420, 815, 910, 1159, 1551, 1752, 2192, 2675
GsuI	CTGGAG	3 cut(s)	91, 1889, 2761
HaeII	RGCGCY	1 cut(s)	1600
HaeIII	GGCC	4 cut(s)	128, 1320, 1582, 2677
HapII	CCGG	3 cut(s)	364, 541, 2720
HgaI	GACGC	2 cut(s)	155, 1294
HhaI	GCGC	1 cut(s)	1599
Hin6I	GCGC	1 cut(s)	1597
HinP1I	GCGC	1 cut(s)	1597
HindIII	AAGCTT	4 cut(s)	321, 902, 1810, 2477
HpaII	CCGG	3 cut(s)	364, 541, 2720
HphI	GGTGA	6 cut(s)	566, 628, 1000, 1840, 2702, 2796
Hpy166II	GTNNAC	1 cut(s)	268
Hpy188I	TCNGA	9 cut(s)	7, 135, 739, 940, 964, 970, 1281, 1326, 1903
Hpy8I	GTNNAC	1 cut(s)	268
HpyCH4III	ACNGT	5 cut(s)	679, 877, 1627, 2086, 2818
HpyCH4IV	ACGT	3 cut(s)	565, 652, 931
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 466, 1124
HpySE526I	ACGT	3 cut(s)	565, 652, 931
HspAI	GCGC	1 cut(s)	1597
KpnI	GGTACC	2 cut(s)	832, 2597
KroI	GCCGGC	1 cut(s)	540
KroNI	GCCGGC	1 cut(s)	542
Ksp22I	TGATCA	1 cut(s)	921
LguI	GCTCTTC	1 cut(s)	486
LmnI	GCTCC	7 cut(s)	115, 434, 1199, 1426, 1564, 1932, 2537
Lsp1109I	GCAGC	7 cut(s)	403, 406, 801, 921, 1562, 1738, 2178
LweI	GCATC	8 cut(s)	202, 363, 403, 466, 956, 1437, 1503, 2564
MaeI	CTAG	1 cut(s)	1380
MaeII	ACGT	3 cut(s)	565, 652, 931
MaeIII	GTNAC	5 cut(s)	345, 554, 580, 2304, 2441
MfeI	CAATTG	2 cut(s)	1119, 2769
MflI	RGATCY	4 cut(s)	375, 703, 1879, 2026
MhlI	GDGCHC	3 cut(s)	120, 270, 1569
MlyI	GAGTC	5 cut(s)	551, 924, 1019, 1027, 2368
MmeI	TCCRAC	3 cut(s)	2266, 2294, 2593
Mph1103I	ATGCAT	1 cut(s)	1701
MroNI	GCCGGC	1 cut(s)	540
MroXI	GAANNNNTTC	3 cut(s)	653, 1073, 2424
MslI	CAYNNNNRTG	6 cut(s)	614, 861, 981, 1215, 1826, 2433
MspA1I	CMGCKG	1 cut(s)	2810
MspCI	CTTAAG	2 cut(s)	1961, 2480
MspI	CCGG	3 cut(s)	364, 541, 2720
MspR9I	CCNGG	4 cut(s)	364, 1868, 1949, 2720
MunI	CAATTG	2 cut(s)	1119, 2769
Mva1269I	GAATGC	1 cut(s)	145
MvaI	CCWGG	2 cut(s)	1868, 1949
MvnI	CGCG	1 cut(s)	1350
MwoI	GCNNNNNNNGC	3 cut(s)	212, 466, 1124
NaeI	GCCGGC	1 cut(s)	542
NciI	CCSGG	2 cut(s)	364, 2720
NdeI	CATATG	1 cut(s)	1335
NgoMIV	GCCGGC	1 cut(s)	540
NlaIV	GGNNCC	3 cut(s)	430, 830, 2595
NmuCI	GTSAC	3 cut(s)	554, 580, 2441
NsiI	ATGCAT	1 cut(s)	1701
NspI	RCATGY	3 cut(s)	1290, 2449, 2650
OliI	CACNNNNGTG	2 cut(s)	614, 1826
PagI	TCATGA	2 cut(s)	208, 918
PceI	AGGCCT	1 cut(s)	128
PciI	ACATGT	1 cut(s)	2445
PciSI	GCTCTTC	1 cut(s)	486
PctI	GAATGC	1 cut(s)	145
PdiI	GCCGGC	1 cut(s)	542
PdmI	GAANNNNTTC	3 cut(s)	653, 1073, 2424
PfeI	GAWTC	5 cut(s)	801, 965, 1855, 1970, 2404
PflMI	CCANNNNNTGG	2 cut(s)	867, 1948
PfoI	TCCNGGA	1 cut(s)	2718
PkrI	GCNGC	9 cut(s)	418, 421, 816, 911, 1160, 1552, 1753, 2193, 2676
PleI	GAGTC	5 cut(s)	551, 923, 1018, 1026, 2367
PpsI	GAGTC	5 cut(s)	551, 923, 1018, 1026, 2367
Ppu21I	YACGTR	1 cut(s)	932
PpuMI	RGGWCCY	1 cut(s)	2008
PscI	ACATGT	1 cut(s)	2445
PshAI	GACNNNNGTC	1 cut(s)	1895
PshBI	ATTAAT	1 cut(s)	2660
PsiI	TTATAA	2 cut(s)	1275, 2132
Psp1406I	AACGTT	1 cut(s)	652
Psp5II	RGGWCCY	1 cut(s)	2008
Psp6I	CCWGG	2 cut(s)	1866, 1947
PspGI	CCWGG	2 cut(s)	1866, 1947
PspN4I	GGNNCC	3 cut(s)	430, 830, 2595
PspPI	GGNCC	2 cut(s)	1318, 2008
PspPPI	RGGWCCY	1 cut(s)	2008
PstI	CTGCAG	2 cut(s)	1863, 2218
PstNI	CAGNNNCTG	1 cut(s)	1867
PsuI	RGATCY	4 cut(s)	375, 703, 1879, 2026
PvuII	CAGCTG	1 cut(s)	2810
RsaI	GTAC	6 cut(s)	283, 830, 1629, 2385, 2595, 2815
RsaNI	GTAC	6 cut(s)	282, 829, 1628, 2384, 2594, 2814
RseI	CAYNNNNRTG	6 cut(s)	614, 861, 981, 1215, 1826, 2433
SapI	GCTCTTC	1 cut(s)	486
SatI	GCNGC	9 cut(s)	417, 420, 815, 910, 1159, 1551, 1752, 2192, 2675
Sau96I	GGNCC	2 cut(s)	1318, 2008
SchI	GAGTC	5 cut(s)	551, 924, 1019, 1027, 2368
ScrFI	CCNGG	4 cut(s)	364, 1868, 1949, 2720
SduI	GDGCHC	3 cut(s)	120, 270, 1569
SfaNI	GCATC	8 cut(s)	202, 363, 403, 466, 956, 1437, 1503, 2564
SfcI	CTRYAG	2 cut(s)	1859, 2214
SinI	GGWCC	1 cut(s)	2008
SmiMI	CAYNNNNRTG	6 cut(s)	614, 861, 981, 1215, 1826, 2433
SmlI	CTYRAG	8 cut(s)	1226, 1300, 1421, 1813, 1961, 2014, 2105, 2480
SmoI	CTYRAG	8 cut(s)	1226, 1300, 1421, 1813, 1961, 2014, 2105, 2480
SseBI	AGGCCT	1 cut(s)	128
SsiI	CCGC	4 cut(s)	1159, 1492, 1679, 2674
SspMI	CTAG	1 cut(s)	1380
StuI	AGGCCT	1 cut(s)	128
StyD4I	CCNGG	4 cut(s)	362, 1866, 1947, 2718
StyI	CCWWGG	3 cut(s)	339, 612, 996
TaaI	ACNGT	5 cut(s)	679, 877, 1627, 2086, 2818
TaiI	ACGT	3 cut(s)	568, 655, 934
TatI	WGTACW	2 cut(s)	281, 1627
TauI	GCSGC	2 cut(s)	1161, 2677
TfiI	GAWTC	5 cut(s)	801, 965, 1855, 1970, 2404
TscAI	CASTG	2 cut(s)	585, 2331
TseFI	GTSAC	3 cut(s)	554, 580, 2441
TseI	GCWGC	7 cut(s)	416, 419, 814, 909, 1550, 1751, 2191
Tsp45I	GTSAC	3 cut(s)	554, 580, 2441
TspGWI	ACGGA	1 cut(s)	2253
TspRI	CASTG	2 cut(s)	585, 2331
Van91I	CCANNNNNTGG	2 cut(s)	867, 1948
Vha464I	CTTAAG	2 cut(s)	1961, 2480
VneI	GTGCAC	1 cut(s)	266
VpaK11BI	GGWCC	1 cut(s)	2008
VspI	ATTAAT	1 cut(s)	2660
XapI	RAATTY	5 cut(s)	233, 740, 1206, 2209, 2501
XceI	RCATGY	3 cut(s)	1290, 2449, 2650
XmnI	GAANNNNTTC	3 cut(s)	653, 1073, 2424
XspI	CTAG	1 cut(s)	1380
Zsp2I	ATGCAT	1 cut(s)	1701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.