Belongs to the disease resistance NB-LRR family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g23430 FvH4_5g23430 FvH4_5g23430 |
| malus_domestica | MD06G1024300.v1.1 |
| prunus_persica | Prupe.5G025300_v2.0.a1 Prupe.5G025300_v2.0.a1 |
| pyrus_communis | pycom06g01970 |
| rosa_chinensis | RchiOBHm_Chr7g0212491 |
| rosa_multiflora | Rmu_sc0007576.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00246750 |
| rosa_rugosa | Rorug07G0134600 Rorug07G0134800 |
| rosa_samantha | Rh7BG261400 Rh7CG284200 Rh7DG274100 |
| rosa_wichuraiana | Rw7G022880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2078 |
| Acc36I | ACCTGC | 2 cut(s) | 1575, 1821 |
| Acc65I | GGTACC | 2 cut(s) | 774, 2539 |
| AccB1I | GGYRCC | 2 cut(s) | 774, 2539 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 813, 1894 |
| AciI | CCGC | 4 cut(s) | 1105, 1438, 1625, 2620 |
| AclI | AACGTT | 1 cut(s) | 598 |
| AclWI | GGATC | 4 cut(s) | 626, 657, 1491, 1833 |
| AcoI | YGGCCR | 1 cut(s) | 2621 |
| AcsI | RAATTY | 5 cut(s) | 179, 686, 1152, 2155, 2447 |
| AcuI | CTGAAG | 3 cut(s) | 101, 1247, 2564 |
| AfaI | GTAC | 6 cut(s) | 229, 776, 1575, 2331, 2541, 2761 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 52, 615, 813, 1894 |
| AflII | CTTAAG | 2 cut(s) | 1907, 2426 |
| AflIII | ACRYGT | 2 cut(s) | 875, 2391 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2395 |
| AjiI | CACGTC | 1 cut(s) | 512 |
| AjnI | CCWGG | 1 cut(s) | 1893 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 542, 574 |
| AleI | CACNNNNGTG | 2 cut(s) | 560, 1772 |
| Alw21I | GWGCWC | 3 cut(s) | 66, 216, 1515 |
| Alw26I | GTCTC | 5 cut(s) | 812, 1398, 1474, 1849, 1986 |
| Alw44I | GTGCAC | 1 cut(s) | 212 |
| AlwI | GGATC | 4 cut(s) | 626, 657, 1491, 1833 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1813 |
| AoxI | GGCC | 4 cut(s) | 72, 1264, 1526, 2621 |
| ApaLI | GTGCAC | 1 cut(s) | 212 |
| ApeKI | GCWGC | 7 cut(s) | 362, 365, 760, 855, 1496, 1697, 2137 |
| ApoI | RAATTY | 5 cut(s) | 179, 686, 1152, 2155, 2447 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2224, 2256 |
| AseI | ATTAAT | 1 cut(s) | 2606 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 599, 1019, 2370 |
| Asp718I | GGTACC | 2 cut(s) | 774, 2539 |
| AspLEI | GCGC | 1 cut(s) | 1545 |
| AspS9I | GGNCC | 3 cut(s) | 72, 1264, 1954 |
| AsuC2I | CCSGG | 1 cut(s) | 2666 |
| AsuHPI | GGTGA | 6 cut(s) | 512, 574, 946, 1786, 2648, 2742 |
| AvaII | GGWCC | 1 cut(s) | 1954 |
| BaeGI | GKGCMC | 1 cut(s) | 216 |
| BanI | GGYRCC | 2 cut(s) | 774, 2539 |
| BbsI | GAAGAC | 1 cut(s) | 2190 |
| Bbv12I | GWGCWC | 3 cut(s) | 66, 216, 1515 |
| BbvCI | CCTCAGC | 1 cut(s) | 1356 |
| BbvI | GCAGC | 7 cut(s) | 349, 352, 747, 867, 1508, 1684, 2124 |
| BccI | CCATC | 8 cut(s) | 710, 1275, 1412, 2090, 2320, 2551, 2621, 2687 |
| BceAI | ACGGC | 3 cut(s) | 388, 1119, 2581 |
| BciT130I | CCWGG | 1 cut(s) | 1895 |
| BciVI | GTATCC | 1 cut(s) | 2256 |
| BclI | TGATCA | 1 cut(s) | 867 |
| BcnI | CCSGG | 1 cut(s) | 2666 |
| BcoDI | GTCTC | 5 cut(s) | 812, 1398, 1474, 1849, 1986 |
| BfaI | CTAG | 1 cut(s) | 1326 |
| BfmI | CTRYAG | 3 cut(s) | 1805, 1814, 2160 |
| BfoI | RGCGCY | 1 cut(s) | 1546 |
| BfrI | CTTAAG | 2 cut(s) | 1907, 2426 |
| BfuAI | ACCTGC | 2 cut(s) | 1575, 1821 |
| BfuI | GTATCC | 1 cut(s) | 2256 |
| BglII | AGATCT | 2 cut(s) | 321, 1972 |
| BisI | GCNGC | 9 cut(s) | 363, 366, 761, 856, 1105, 1497, 1698, 2138, 2621 |
| BlpI | GCTNAGC | 1 cut(s) | 2046 |
| BlsI | GCNGC | 9 cut(s) | 364, 367, 762, 857, 1106, 1498, 1699, 2139, 2622 |
| Bme1390I | CCNGG | 2 cut(s) | 1895, 2666 |
| Bme18I | GGWCC | 1 cut(s) | 1954 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2395 |
| BmgBI | CACGTC | 1 cut(s) | 512 |
| BmgT120I | GGNCC | 3 cut(s) | 72, 1264, 1954 |
| BmiI | GGNNCC | 3 cut(s) | 376, 776, 2541 |
| BmrFI | CCNGG | 2 cut(s) | 1895, 2666 |
| BmsI | GCATC | 8 cut(s) | 148, 309, 349, 412, 902, 1383, 1449, 2510 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1841 |
| BpiI | GAAGAC | 1 cut(s) | 2190 |
| BplI | GAGNNNNNCTC | 5 cut(s) | 29, 21, 53, 1753, 1785 |
| BpmI | CTGGAG | 2 cut(s) | 37, 2707 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1247, 1356, 1676 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2046 |
| BpuEI | CTTGAG | 5 cut(s) | 1193, 1352, 1780, 1945, 2036 |
| BpuMI | CCSGG | 1 cut(s) | 2666 |
| BsaAI | YACGTR | 1 cut(s) | 878 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2709 |
| BsaJI | CCNNGG | 3 cut(s) | 285, 558, 942 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 636, 666, 2680, 2710 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 52, 615, 813, 1894 |
| Bse1I | ACTGG | 3 cut(s) | 387, 483, 2690 |
| Bse3DI | GCAATG | 3 cut(s) | 102, 1168, 2493 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2709 |
| BseBI | CCWGG | 1 cut(s) | 1895 |
| BseDI | CCNNGG | 3 cut(s) | 285, 558, 942 |
| BseGI | GGATG | 6 cut(s) | 427, 893, 1440, 1637, 2323, 2710 |
| BseJI | GATNNNNATC | 1 cut(s) | 2709 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 52, 615, 813, 1894 |
| BseMI | GCAATG | 3 cut(s) | 102, 1168, 2493 |
| BseMII | CTCAG | 8 cut(s) | 644, 921, 1213, 1238, 1347, 1784, 1839, 2473 |
| BseNI | ACTGG | 3 cut(s) | 387, 483, 2690 |
| BseRI | GAGGAG | 2 cut(s) | 179, 2196 |
| BseSI | GKGCMC | 1 cut(s) | 216 |
| BseXI | GCAGC | 7 cut(s) | 349, 352, 747, 867, 1508, 1684, 2124 |
| BsgI | GTGCAG | 1 cut(s) | 1683 |
| BshFI | GGCC | 4 cut(s) | 74, 1266, 1528, 2623 |
| BshNI | GGYRCC | 2 cut(s) | 774, 2539 |
| BsiHKAI | GWGCWC | 3 cut(s) | 66, 216, 1515 |
| BsiSI | CCGG | 1 cut(s) | 2666 |
| BslFI | GGGAC | 1 cut(s) | 2730 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 52, 615, 813, 1894 |
| BsmAI | GTCTC | 5 cut(s) | 812, 1398, 1474, 1849, 1986 |
| BsmFI | GGGAC | 1 cut(s) | 2730 |
| BsmI | GAATGC | 1 cut(s) | 91 |
| BsnI | GGCC | 4 cut(s) | 74, 1266, 1528, 2623 |
| Bsp1286I | GDGCHC | 3 cut(s) | 66, 216, 1515 |
| Bsp1407I | TGTACA | 1 cut(s) | 1573 |
| Bsp143I | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2046 |
| BspACI | CCGC | 4 cut(s) | 1105, 1438, 1625, 2620 |
| BspANI | GGCC | 4 cut(s) | 74, 1266, 1528, 2623 |
| BspCNI | CTCAG | 8 cut(s) | 643, 920, 1212, 1239, 1348, 1783, 1840, 2472 |
| BspHI | TCATGA | 2 cut(s) | 154, 864 |
| BspLI | GGNNCC | 3 cut(s) | 376, 776, 2541 |
| BspMAI | CTGCAG | 3 cut(s) | 1809, 1818, 2164 |
| BspMI | ACCTGC | 2 cut(s) | 1575, 1821 |
| BspPI | GGATC | 4 cut(s) | 626, 657, 1491, 1833 |
| BspQI | GCTCTTC | 1 cut(s) | 432 |
| BspT107I | GGYRCC | 2 cut(s) | 774, 2539 |
| BspTI | CTTAAG | 2 cut(s) | 1907, 2426 |
| BsrDI | GCAATG | 3 cut(s) | 102, 1168, 2493 |
| BsrGI | TGTACA | 1 cut(s) | 1573 |
| BsrI | ACTGG | 3 cut(s) | 387, 483, 2690 |
| BssECI | CCNNGG | 3 cut(s) | 285, 558, 942 |
| BssMI | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| BssT1I | CCWWGG | 3 cut(s) | 285, 558, 942 |
| Bst2UI | CCWGG | 1 cut(s) | 1895 |
| Bst4CI | ACNGT | 4 cut(s) | 625, 823, 1573, 2764 |
| Bst6I | CTCTTC | 3 cut(s) | 432, 2241, 2528 |
| BstAFI | CTTAAG | 2 cut(s) | 1907, 2426 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 999, 1813 |
| BstAUI | TGTACA | 1 cut(s) | 1573 |
| BstBAI | YACGTR | 1 cut(s) | 878 |
| BstC8I | GCNNGC | 1 cut(s) | 488 |
| BstF5I | GGATG | 6 cut(s) | 427, 893, 1440, 1637, 2323, 2710 |
| BstH2I | RGCGCY | 1 cut(s) | 1546 |
| BstHHI | GCGC | 1 cut(s) | 1545 |
| BstKTI | GATC | 9 cut(s) | 324, 412, 621, 652, 870, 1486, 1828, 1975, 2185 |
| BstMAI | GTCTC | 5 cut(s) | 812, 1398, 1474, 1849, 1986 |
| BstMBI | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 158, 412, 999, 1070, 1813 |
| BstNI | CCWGG | 1 cut(s) | 1895 |
| BstNSI | RCATGY | 4 cut(s) | 997, 1236, 2395, 2596 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1841 |
| BstSCI | CCNGG | 2 cut(s) | 1893, 2664 |
| BstSFI | CTRYAG | 3 cut(s) | 1805, 1814, 2160 |
| BstSLI | GKGCMC | 1 cut(s) | 216 |
| BstV1I | GCAGC | 7 cut(s) | 349, 352, 747, 867, 1508, 1684, 2124 |
| BstV2I | GAAGAC | 1 cut(s) | 2190 |
| BstX2I | RGATCY | 4 cut(s) | 321, 649, 1825, 1972 |
| BstYI | RGATCY | 4 cut(s) | 321, 649, 1825, 1972 |
| BsuI | GTATCC | 1 cut(s) | 2256 |
| BsuRI | GGCC | 4 cut(s) | 74, 1266, 1528, 2623 |
| BtrI | CACGTC | 1 cut(s) | 512 |
| BtsCI | GGATG | 6 cut(s) | 427, 893, 1440, 1637, 2323, 2710 |
| BtsI | GCAGTG | 1 cut(s) | 2270 |
| BtsIMutI | CAGTG | 2 cut(s) | 531, 2270 |
| BveI | ACCTGC | 2 cut(s) | 1575, 1821 |
| Cac8I | GCNNGC | 1 cut(s) | 488 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1813 |
| CciI | TCATGA | 2 cut(s) | 154, 864 |
| CfoI | GCGC | 1 cut(s) | 1545 |
| Cfr13I | GGNCC | 3 cut(s) | 72, 1264, 1954 |
| CseI | GACGC | 2 cut(s) | 101, 1240 |
| Csp6I | GTAC | 6 cut(s) | 228, 775, 1574, 2330, 2540, 2760 |
| CviQI | GTAC | 6 cut(s) | 228, 775, 1574, 2330, 2540, 2760 |
| DpnI | GATC | 9 cut(s) | 323, 411, 620, 651, 869, 1485, 1827, 1974, 2184 |
| DpnII | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| DraI | TTTAAA | 1 cut(s) | 2419 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2395 |
| EaeI | YGGCCR | 1 cut(s) | 2621 |
| Eam1104I | CTCTTC | 3 cut(s) | 432, 2241, 2528 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2395 |
| EarI | CTCTTC | 3 cut(s) | 432, 2241, 2528 |
| Eco130I | CCWWGG | 3 cut(s) | 285, 558, 942 |
| Eco32I | GATATC | 1 cut(s) | 1033 |
| Eco47I | GGWCC | 1 cut(s) | 1954 |
| Eco57I | CTGAAG | 3 cut(s) | 101, 1247, 2564 |
| EcoO109I | RGGNCCY | 2 cut(s) | 72, 1954 |
| EcoRII | CCWGG | 1 cut(s) | 1893 |
| EcoRV | GATATC | 1 cut(s) | 1033 |
| EcoT14I | CCWWGG | 3 cut(s) | 285, 558, 942 |
| EcoT22I | ATGCAT | 1 cut(s) | 1647 |
| ErhI | CCWWGG | 3 cut(s) | 285, 558, 942 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1931, 1963 |
| FaqI | GGGAC | 1 cut(s) | 2730 |
| FauNDI | CATATG | 1 cut(s) | 1281 |
| FbaI | TGATCA | 1 cut(s) | 867 |
| Fnu4HI | GCNGC | 9 cut(s) | 363, 366, 761, 856, 1105, 1497, 1698, 2138, 2621 |
| FokI | GGATG | 6 cut(s) | 434, 880, 1427, 1624, 2330, 2717 |
| Fsp4HI | GCNGC | 9 cut(s) | 363, 366, 761, 856, 1105, 1497, 1698, 2138, 2621 |
| FspBI | CTAG | 1 cut(s) | 1326 |
| GlaI | GCGC | 1 cut(s) | 1544 |
| GluI | GCNGC | 9 cut(s) | 363, 366, 761, 856, 1105, 1497, 1698, 2138, 2621 |
| GsuI | CTGGAG | 2 cut(s) | 37, 2707 |
| HaeII | RGCGCY | 1 cut(s) | 1546 |
| HaeIII | GGCC | 4 cut(s) | 74, 1266, 1528, 2623 |
| HapII | CCGG | 1 cut(s) | 2666 |
| HgaI | GACGC | 2 cut(s) | 101, 1240 |
| HhaI | GCGC | 1 cut(s) | 1545 |
| Hin6I | GCGC | 1 cut(s) | 1543 |
| HinP1I | GCGC | 1 cut(s) | 1543 |
| HindIII | AAGCTT | 4 cut(s) | 267, 848, 1756, 2423 |
| HpaII | CCGG | 1 cut(s) | 2666 |
| HphI | GGTGA | 6 cut(s) | 512, 574, 946, 1786, 2648, 2742 |
| Hpy166II | GTNNAC | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 8 cut(s) | 81, 685, 886, 910, 916, 1227, 1272, 1849 |
| Hpy8I | GTNNAC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 4 cut(s) | 625, 823, 1573, 2764 |
| HpyCH4IV | ACGT | 6 cut(s) | 511, 598, 810, 877, 1634, 1820 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 158, 412, 999, 1070, 1813 |
| HpySE526I | ACGT | 6 cut(s) | 511, 598, 810, 877, 1634, 1820 |
| HspAI | GCGC | 1 cut(s) | 1543 |
| KpnI | GGTACC | 2 cut(s) | 778, 2543 |
| Ksp22I | TGATCA | 1 cut(s) | 867 |
| Kzo9I | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| LguI | GCTCTTC | 1 cut(s) | 432 |
| LmnI | GCTCC | 7 cut(s) | 61, 380, 1145, 1372, 1510, 1878, 2483 |
| Lsp1109I | GCAGC | 7 cut(s) | 349, 352, 747, 867, 1508, 1684, 2124 |
| LweI | GCATC | 8 cut(s) | 148, 309, 349, 412, 902, 1383, 1449, 2510 |
| MaeI | CTAG | 1 cut(s) | 1326 |
| MaeII | ACGT | 6 cut(s) | 511, 598, 810, 877, 1634, 1820 |
| MaeIII | GTNAC | 5 cut(s) | 291, 500, 526, 2250, 2387 |
| MalI | GATC | 9 cut(s) | 323, 411, 620, 651, 869, 1485, 1827, 1974, 2184 |
| MboI | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| MfeI | CAATTG | 2 cut(s) | 1065, 2715 |
| MflI | RGATCY | 4 cut(s) | 321, 649, 1825, 1972 |
| MhlI | GDGCHC | 3 cut(s) | 66, 216, 1515 |
| MlyI | GAGTC | 5 cut(s) | 497, 870, 965, 973, 2314 |
| MmeI | TCCRAC | 4 cut(s) | 1803, 2212, 2240, 2539 |
| Mph1103I | ATGCAT | 1 cut(s) | 1647 |
| MroXI | GAANNNNTTC | 3 cut(s) | 599, 1019, 2370 |
| MslI | CAYNNNNRTG | 5 cut(s) | 560, 927, 1161, 1772, 2379 |
| MspA1I | CMGCKG | 2 cut(s) | 486, 2756 |
| MspCI | CTTAAG | 2 cut(s) | 1907, 2426 |
| MspI | CCGG | 1 cut(s) | 2666 |
| MspR9I | CCNGG | 2 cut(s) | 1895, 2666 |
| MunI | CAATTG | 2 cut(s) | 1065, 2715 |
| Mva1269I | GAATGC | 1 cut(s) | 91 |
| MvaI | CCWGG | 1 cut(s) | 1895 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 158, 412, 999, 1070, 1813 |
| NciI | CCSGG | 1 cut(s) | 2666 |
| NdeI | CATATG | 1 cut(s) | 1281 |
| NdeII | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| NlaIV | GGNNCC | 3 cut(s) | 376, 776, 2541 |
| NmuCI | GTSAC | 3 cut(s) | 500, 526, 2387 |
| NsiI | ATGCAT | 1 cut(s) | 1647 |
| NspI | RCATGY | 4 cut(s) | 997, 1236, 2395, 2596 |
| OliI | CACNNNNGTG | 2 cut(s) | 560, 1772 |
| PagI | TCATGA | 2 cut(s) | 154, 864 |
| PciI | ACATGT | 1 cut(s) | 2391 |
| PciSI | GCTCTTC | 1 cut(s) | 432 |
| PctI | GAATGC | 1 cut(s) | 91 |
| PdmI | GAANNNNTTC | 3 cut(s) | 599, 1019, 2370 |
| PfeI | GAWTC | 6 cut(s) | 312, 747, 911, 1801, 1916, 2350 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 813, 1894 |
| PfoI | TCCNGGA | 1 cut(s) | 2664 |
| PkrI | GCNGC | 9 cut(s) | 364, 367, 762, 857, 1106, 1498, 1699, 2139, 2622 |
| PleI | GAGTC | 5 cut(s) | 497, 869, 964, 972, 2313 |
| PpsI | GAGTC | 5 cut(s) | 497, 869, 964, 972, 2313 |
| Ppu21I | YACGTR | 1 cut(s) | 878 |
| PpuMI | RGGWCCY | 1 cut(s) | 1954 |
| PscI | ACATGT | 1 cut(s) | 2391 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1841 |
| PshBI | ATTAAT | 1 cut(s) | 2606 |
| PsiI | TTATAA | 1 cut(s) | 2078 |
| Psp1406I | AACGTT | 1 cut(s) | 598 |
| Psp5II | RGGWCCY | 1 cut(s) | 1954 |
| Psp6I | CCWGG | 1 cut(s) | 1893 |
| PspGI | CCWGG | 1 cut(s) | 1893 |
| PspN4I | GGNNCC | 3 cut(s) | 376, 776, 2541 |
| PspPI | GGNCC | 3 cut(s) | 72, 1264, 1954 |
| PspPPI | RGGWCCY | 1 cut(s) | 1954 |
| PstI | CTGCAG | 3 cut(s) | 1809, 1818, 2164 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1813 |
| PsuI | RGATCY | 4 cut(s) | 321, 649, 1825, 1972 |
| PvuII | CAGCTG | 2 cut(s) | 486, 2756 |
| RsaI | GTAC | 6 cut(s) | 229, 776, 1575, 2331, 2541, 2761 |
| RsaNI | GTAC | 6 cut(s) | 228, 775, 1574, 2330, 2540, 2760 |
| RseI | CAYNNNNRTG | 5 cut(s) | 560, 927, 1161, 1772, 2379 |
| SapI | GCTCTTC | 1 cut(s) | 432 |
| SatI | GCNGC | 9 cut(s) | 363, 366, 761, 856, 1105, 1497, 1698, 2138, 2621 |
| Sau3AI | GATC | 9 cut(s) | 321, 409, 618, 649, 867, 1483, 1825, 1972, 2182 |
| Sau96I | GGNCC | 3 cut(s) | 72, 1264, 1954 |
| SchI | GAGTC | 5 cut(s) | 497, 870, 965, 973, 2314 |
| ScrFI | CCNGG | 2 cut(s) | 1895, 2666 |
| SduI | GDGCHC | 3 cut(s) | 66, 216, 1515 |
| SfaNI | GCATC | 8 cut(s) | 148, 309, 349, 412, 902, 1383, 1449, 2510 |
| SfcI | CTRYAG | 3 cut(s) | 1805, 1814, 2160 |
| SinI | GGWCC | 1 cut(s) | 1954 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 560, 927, 1161, 1772, 2379 |
| SmlI | CTYRAG | 7 cut(s) | 1172, 1367, 1759, 1907, 1960, 2051, 2426 |
| SmoI | CTYRAG | 7 cut(s) | 1172, 1367, 1759, 1907, 1960, 2051, 2426 |
| SsiI | CCGC | 4 cut(s) | 1105, 1438, 1625, 2620 |
| SspMI | CTAG | 1 cut(s) | 1326 |
| StyD4I | CCNGG | 2 cut(s) | 1893, 2664 |
| StyI | CCWWGG | 3 cut(s) | 285, 558, 942 |
| TaaI | ACNGT | 4 cut(s) | 625, 823, 1573, 2764 |
| TaiI | ACGT | 6 cut(s) | 514, 601, 813, 880, 1637, 1823 |
| TaqI | TCGA | 1 cut(s) | 2121 |
| TatI | WGTACW | 2 cut(s) | 227, 1573 |
| TauI | GCSGC | 2 cut(s) | 1107, 2623 |
| TfiI | GAWTC | 6 cut(s) | 312, 747, 911, 1801, 1916, 2350 |
| TscAI | CASTG | 2 cut(s) | 531, 2277 |
| TseFI | GTSAC | 3 cut(s) | 500, 526, 2387 |
| TseI | GCWGC | 7 cut(s) | 362, 365, 760, 855, 1496, 1697, 2137 |
| Tsp45I | GTSAC | 3 cut(s) | 500, 526, 2387 |
| TspGWI | ACGGA | 1 cut(s) | 2199 |
| TspRI | CASTG | 2 cut(s) | 531, 2277 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 813, 1894 |
| Vha464I | CTTAAG | 2 cut(s) | 1907, 2426 |
| VneI | GTGCAC | 1 cut(s) | 212 |
| VpaK11BI | GGWCC | 1 cut(s) | 1954 |
| VspI | ATTAAT | 1 cut(s) | 2606 |
| XapI | RAATTY | 5 cut(s) | 179, 686, 1152, 2155, 2447 |
| XceI | RCATGY | 4 cut(s) | 997, 1236, 2395, 2596 |
| XmnI | GAANNNNTTC | 3 cut(s) | 599, 1019, 2370 |
| XspI | CTAG | 1 cut(s) | 1326 |
| Zsp2I | ATGCAT | 1 cut(s) | 1647 |