GPN-loop GTPase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0367611 RchiOBHm_Chr3g0495411 RchiOBHm_Chr6g0249061 RchiOBHm_Chr6g0297651 RchiOBHm_Chr7g0223091 |
| rosa_multiflora | Rmu_sc0003895.1_g000028 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 13 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 71 |
| AflIII | ACRYGT | 1 cut(s) | 139 |
| AgsI | TTSAA | 1 cut(s) | 181 |
| AjnI | CCWGG | 2 cut(s) | 87, 118 |
| AluBI | AGCT | 1 cut(s) | 175 |
| AluI | AGCT | 1 cut(s) | 175 |
| AspS9I | GGNCC | 1 cut(s) | 62 |
| AvaII | GGWCC | 1 cut(s) | 62 |
| BciT130I | CCWGG | 2 cut(s) | 89, 120 |
| BfuAI | ACCTGC | 1 cut(s) | 13 |
| Bme1390I | CCNGG | 2 cut(s) | 89, 120 |
| Bme18I | GGWCC | 1 cut(s) | 62 |
| BmgT120I | GGNCC | 1 cut(s) | 62 |
| BmiI | GGNNCC | 2 cut(s) | 63, 64 |
| BmrFI | CCNGG | 2 cut(s) | 89, 120 |
| BmrI | ACTGGG | 1 cut(s) | 68 |
| BmsI | GCATC | 1 cut(s) | 178 |
| BmuI | ACTGGG | 1 cut(s) | 68 |
| BsaAI | YACGTR | 1 cut(s) | 140 |
| BsaJI | CCNNGG | 1 cut(s) | 118 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 71 |
| Bse1I | ACTGG | 1 cut(s) | 63 |
| BseBI | CCWGG | 2 cut(s) | 89, 120 |
| BseDI | CCNNGG | 1 cut(s) | 118 |
| BseGI | GGATG | 2 cut(s) | 40, 97 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 71 |
| BseNI | ACTGG | 1 cut(s) | 63 |
| BslFI | GGGAC | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 71 |
| BsmFI | GGGAC | 1 cut(s) | 48 |
| BspLI | GGNNCC | 2 cut(s) | 63, 64 |
| BspMI | ACCTGC | 1 cut(s) | 13 |
| BsrI | ACTGG | 1 cut(s) | 63 |
| BssECI | CCNNGG | 1 cut(s) | 118 |
| Bst2UI | CCWGG | 2 cut(s) | 89, 120 |
| BstBAI | YACGTR | 1 cut(s) | 140 |
| BstF5I | GGATG | 2 cut(s) | 40, 97 |
| BstNI | CCWGG | 2 cut(s) | 89, 120 |
| BstSCI | CCNGG | 2 cut(s) | 87, 118 |
| BtsCI | GGATG | 2 cut(s) | 40, 97 |
| BveI | ACCTGC | 1 cut(s) | 13 |
| Cfr13I | GGNCC | 1 cut(s) | 62 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 2 cut(s) | 5, 175 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 175 |
| Eco32I | GATATC | 1 cut(s) | 13 |
| Eco47I | GGWCC | 1 cut(s) | 62 |
| EcoO109I | RGGNCCY | 1 cut(s) | 62 |
| EcoRII | CCWGG | 2 cut(s) | 87, 118 |
| EcoRV | GATATC | 1 cut(s) | 13 |
| EcoT22I | ATGCAT | 2 cut(s) | 129, 171 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 5 cut(s) | 44, 125, 129, 137, 167 |
| FaqI | GGGAC | 1 cut(s) | 48 |
| FatI | CATG | 1 cut(s) | 165 |
| FokI | GGATG | 2 cut(s) | 47, 104 |
| Hin1II | CATG | 1 cut(s) | 169 |
| Hpy188III | TCNNGA | 1 cut(s) | 178 |
| HpyCH4IV | ACGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 2 cut(s) | 127, 169 |
| HpySE526I | ACGT | 1 cut(s) | 139 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| KflI | GGGWCCC | 1 cut(s) | 62 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 6 cut(s) | 8, 44, 74, 101, 105, 132 |
| LweI | GCATC | 1 cut(s) | 178 |
| MaeII | ACGT | 1 cut(s) | 139 |
| MmeI | TCCRAC | 2 cut(s) | 12, 34 |
| MnlI | CCTC | 3 cut(s) | 40, 64, 73 |
| Mph1103I | ATGCAT | 2 cut(s) | 129, 171 |
| MseI | TTAA | 1 cut(s) | 27 |
| MspR9I | CCNGG | 2 cut(s) | 89, 120 |
| MvaI | CCWGG | 2 cut(s) | 89, 120 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NlaIV | GGNNCC | 2 cut(s) | 63, 64 |
| NsiI | ATGCAT | 2 cut(s) | 129, 171 |
| PflFI | GACNNNGTC | 1 cut(s) | 60 |
| Ppu21I | YACGTR | 1 cut(s) | 140 |
| PpuMI | RGGWCCY | 1 cut(s) | 62 |
| Psp5II | RGGWCCY | 1 cut(s) | 62 |
| Psp6I | CCWGG | 2 cut(s) | 87, 118 |
| PspGI | CCWGG | 2 cut(s) | 87, 118 |
| PspN4I | GGNNCC | 2 cut(s) | 63, 64 |
| PspPI | GGNCC | 1 cut(s) | 62 |
| PspPPI | RGGWCCY | 1 cut(s) | 62 |
| PsyI | GACNNNGTC | 1 cut(s) | 60 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| Sau96I | GGNCC | 1 cut(s) | 62 |
| ScrFI | CCNGG | 2 cut(s) | 89, 120 |
| SetI | ASST | 6 cut(s) | 27, 90, 124, 142, 177, 187 |
| SfaNI | GCATC | 1 cut(s) | 178 |
| SinI | GGWCC | 1 cut(s) | 62 |
| StyD4I | CCNGG | 2 cut(s) | 87, 118 |
| TaiI | ACGT | 1 cut(s) | 142 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TspGWI | ACGGA | 1 cut(s) | 135 |
| Tth111I | GACNNNGTC | 1 cut(s) | 60 |
| VpaK11BI | GGWCC | 1 cut(s) | 62 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 73 |
| Zsp2I | ATGCAT | 2 cut(s) | 129, 171 |