RchiOBHm_Chr7g0233281

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
57708074 .. 57709047
974 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20909

Sequence Viewer

Length: 150 bp
ATGGATCTGGGTGATTTGTTTGTTCCTGATCGAGGAGGCCATGGTGGTATGAAGCCAGATCAGCCTCCAAACATGGCAAGCTCTGCTCTTTCTTCTTCTCTGCCTCCCGCAATGTCTTCGTTGGTTCTGTGCTCTCAGCCATTGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.04

Weight (kDa)

4.56

Isoelectric Point (pI)

70.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0020414)

Species Orthologous Gene IDs
prunus_persica Prupe.6G029200_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0196261 RchiOBHm_Chr7g0233281
rosa_multiflora Rmu_sc0018617.1_g000001
rosa_roxburghii Rroxscaffold_1G00002260
rosa_samantha Rh7CG377500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 108
AclWI GGATC 1 cut(s) 12
AfiI CCNNNNNNNGG 1 cut(s) 32
AluBI AGCT 1 cut(s) 81
AluI AGCT 1 cut(s) 81
Alw21I GWGCWC 1 cut(s) 134
AlwI GGATC 1 cut(s) 12
AoxI GGCC 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 23
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 1 cut(s) 134
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BpiI GAAGAC 1 cut(s) 108
BsaJI CCNNGG 1 cut(s) 40
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse3DI GCAATG 2 cut(s) 117, 140
BseDI CCNNGG 1 cut(s) 40
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMI GCAATG 2 cut(s) 117, 140
BseMII CTCAG 1 cut(s) 149
BseRI GAGGAG 1 cut(s) 48
BshFI GGCC 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 134
BslI CCNNNNNNNGG 1 cut(s) 32
BsnI GGCC 1 cut(s) 39
Bsp1286I GDGCHC 1 cut(s) 134
Bsp143I GATC 3 cut(s) 4, 28, 58
Bsp19I CCATGG 1 cut(s) 40
BspACI CCGC 1 cut(s) 108
BspANI GGCC 1 cut(s) 39
BspCNI CTCAG 1 cut(s) 148
BspPI GGATC 1 cut(s) 12
BsrDI GCAATG 2 cut(s) 117, 140
BssECI CCNNGG 1 cut(s) 40
BssMI GATC 3 cut(s) 4, 28, 58
BssT1I CCWWGG 1 cut(s) 40
BstAPI GCANNNNNTGC 1 cut(s) 83
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 1 cut(s) 135
BstDSI CCRYGG 1 cut(s) 40
BstENI CCTNNNNNAGG 1 cut(s) 30
BstKTI GATC 3 cut(s) 7, 31, 61
BstMBI GATC 3 cut(s) 4, 28, 58
BstMWI GCNNNNNNNGC 2 cut(s) 61, 83
BstV2I GAAGAC 1 cut(s) 108
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 1 cut(s) 39
BtgI CCRYGG 1 cut(s) 40
Cac8I GCNNGC 1 cut(s) 79
CviAII CATG 2 cut(s) 41, 73
CviJI RGCY 5 cut(s) 39, 55, 64, 81, 139
CviKI_1 RGCY 5 cut(s) 39, 55, 64, 81, 139
DdeI CTNAG 1 cut(s) 135
DpnI GATC 3 cut(s) 6, 30, 60
DpnII GATC 3 cut(s) 4, 28, 58
Eco130I CCWWGG 1 cut(s) 40
EcoNI CCTNNNNNAGG 1 cut(s) 30
EcoT14I CCWWGG 1 cut(s) 40
ErhI CCWWGG 1 cut(s) 40
FaeI CATG 2 cut(s) 44, 76
FaiI YATR 3 cut(s) 42, 50, 74
FatI CATG 2 cut(s) 40, 72
FauI CCCGC 1 cut(s) 115
HaeIII GGCC 1 cut(s) 39
Hin1II CATG 2 cut(s) 44, 76
HphI GGTGA 1 cut(s) 23
Hpy188III TCNNGA 1 cut(s) 26
HpyCH4V TGCA 1 cut(s) 145
HpyF10VI GCNNNNNNNGC 2 cut(s) 61, 83
HpyF3I CTNAG 1 cut(s) 135
Hsp92II CATG 2 cut(s) 44, 76
Kzo9I GATC 3 cut(s) 4, 28, 58
LpnPI CCDG 2 cut(s) 39, 69
MalI GATC 3 cut(s) 6, 30, 60
MboI GATC 3 cut(s) 4, 28, 58
MboII GAAGA 3 cut(s) 84, 87, 108
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 1 cut(s) 134
MnlI CCTC 4 cut(s) 26, 29, 75, 114
MwoI GCNNNNNNNGC 2 cut(s) 61, 83
NcoI CCATGG 1 cut(s) 40
NdeII GATC 3 cut(s) 4, 28, 58
NlaIII CATG 2 cut(s) 44, 76
PsuI RGATCY 1 cut(s) 4
Sau3AI GATC 3 cut(s) 4, 28, 58
SduI GDGCHC 1 cut(s) 134
SetI ASST 1 cut(s) 83
SgeI CNNG 8 cut(s) 20, 38, 44, 53, 68, 85, 90, 119
SsiI CCGC 1 cut(s) 108
StyI CCWWGG 1 cut(s) 40
TaqI TCGA 1 cut(s) 31
TspDTI ATGAA 1 cut(s) 65
XagI CCTNNNNNAGG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.