mRNA-decapping enzyme-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0234071 |
| rosa_laevigata | RLG00000001868 |
| rosa_roxburghii | Rroxscaffold_1G00044390 |
| rosa_samantha | Rh5AG422800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 297 |
| AccBSI | CCGCTC | 1 cut(s) | 54 |
| AciI | CCGC | 3 cut(s) | 54, 75, 99 |
| AcoI | YGGCCR | 1 cut(s) | 100 |
| AcvI | CACGTG | 1 cut(s) | 305 |
| AgsI | TTSAA | 1 cut(s) | 239 |
| AluBI | AGCT | 3 cut(s) | 25, 269, 383 |
| AluI | AGCT | 3 cut(s) | 25, 269, 383 |
| Alw26I | GTCTC | 1 cut(s) | 68 |
| AoxI | GGCC | 2 cut(s) | 72, 100 |
| ApeKI | GCWGC | 1 cut(s) | 412 |
| AspS9I | GGNCC | 1 cut(s) | 16 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| AvaII | GGWCC | 1 cut(s) | 16 |
| BbrPI | CACGTG | 1 cut(s) | 305 |
| BbvI | GCAGC | 1 cut(s) | 399 |
| BcoDI | GTCTC | 1 cut(s) | 68 |
| BfaI | CTAG | 3 cut(s) | 200, 336, 387 |
| BisI | GCNGC | 4 cut(s) | 55, 75, 100, 413 |
| BlsI | GCNGC | 4 cut(s) | 56, 76, 101, 414 |
| Bme18I | GGWCC | 1 cut(s) | 16 |
| BmgT120I | GGNCC | 1 cut(s) | 16 |
| BmiI | GGNNCC | 1 cut(s) | 363 |
| Bpu10I | CCTNAGC | 1 cut(s) | 270 |
| BsaAI | YACGTR | 1 cut(s) | 305 |
| BsaJI | CCNNGG | 2 cut(s) | 69, 357 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 338, 368 |
| Bse1I | ACTGG | 1 cut(s) | 163 |
| BseDI | CCNNGG | 2 cut(s) | 69, 357 |
| BseMII | CTCAG | 3 cut(s) | 109, 164, 284 |
| BseNI | ACTGG | 1 cut(s) | 163 |
| BseXI | GCAGC | 1 cut(s) | 399 |
| Bsh1285I | CGRYCG | 1 cut(s) | 61 |
| BshFI | GGCC | 2 cut(s) | 74, 102 |
| BsiEI | CGRYCG | 1 cut(s) | 61 |
| BsmAI | GTCTC | 1 cut(s) | 68 |
| BsmBI | CGTCTC | 1 cut(s) | 68 |
| BsnI | GGCC | 2 cut(s) | 74, 102 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspACI | CCGC | 3 cut(s) | 54, 75, 99 |
| BspANI | GGCC | 2 cut(s) | 74, 102 |
| BspCNI | CTCAG | 3 cut(s) | 108, 163, 283 |
| BspLI | GGNNCC | 1 cut(s) | 363 |
| BsrBI | CCGCTC | 1 cut(s) | 54 |
| BsrI | ACTGG | 1 cut(s) | 163 |
| BssECI | CCNNGG | 2 cut(s) | 69, 357 |
| BssMI | GATC | 1 cut(s) | 58 |
| BssT1I | CCWWGG | 2 cut(s) | 69, 357 |
| Bst6I | CTCTTC | 1 cut(s) | 335 |
| BstBAI | YACGTR | 1 cut(s) | 305 |
| BstDEI | CTNAG | 3 cut(s) | 95, 150, 270 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMAI | GTCTC | 1 cut(s) | 68 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstMCI | CGRYCG | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 54 |
| BstV1I | GCAGC | 1 cut(s) | 399 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 85 |
| BsuRI | GGCC | 2 cut(s) | 74, 102 |
| Cfr13I | GGNCC | 1 cut(s) | 16 |
| CviJI | RGCY | 7 cut(s) | 25, 74, 102, 129, 154, 269, 383 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 74, 102, 129, 154, 269, 383 |
| DdeI | CTNAG | 3 cut(s) | 95, 150, 270 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| EaeI | YGGCCR | 1 cut(s) | 100 |
| Eam1104I | CTCTTC | 1 cut(s) | 335 |
| EarI | CTCTTC | 1 cut(s) | 335 |
| Eco130I | CCWWGG | 2 cut(s) | 69, 357 |
| Eco47I | GGWCC | 1 cut(s) | 16 |
| Eco72I | CACGTG | 1 cut(s) | 305 |
| EcoT14I | CCWWGG | 2 cut(s) | 69, 357 |
| ErhI | CCWWGG | 2 cut(s) | 69, 357 |
| Esp3I | CGTCTC | 1 cut(s) | 68 |
| FaiI | YATR | 7 cut(s) | 176, 231, 247, 258, 297, 352, 427 |
| Fnu4HI | GCNGC | 4 cut(s) | 55, 75, 100, 413 |
| Fsp4HI | GCNGC | 4 cut(s) | 55, 75, 100, 413 |
| FspBI | CTAG | 3 cut(s) | 200, 336, 387 |
| GluI | GCNGC | 4 cut(s) | 55, 75, 100, 413 |
| HaeIII | GGCC | 2 cut(s) | 74, 102 |
| HinfI | GANTC | 3 cut(s) | 178, 208, 340 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy188III | TCNNGA | 2 cut(s) | 19, 272 |
| Hpy99I | CGWCG | 1 cut(s) | 47 |
| HpyCH4IV | ACGT | 1 cut(s) | 304 |
| HpyCH4V | TGCA | 1 cut(s) | 323 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 54 |
| HpyF3I | CTNAG | 3 cut(s) | 95, 150, 270 |
| HpySE526I | ACGT | 1 cut(s) | 304 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LmnI | GCTCC | 1 cut(s) | 88 |
| LpnPI | CCDG | 5 cut(s) | 32, 116, 123, 176, 257 |
| Lsp1109I | GCAGC | 1 cut(s) | 399 |
| MaeI | CTAG | 3 cut(s) | 200, 336, 387 |
| MaeII | ACGT | 1 cut(s) | 304 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 1 cut(s) | 60 |
| MbiI | CCGCTC | 1 cut(s) | 54 |
| MboI | GATC | 1 cut(s) | 58 |
| MboII | GAAGA | 1 cut(s) | 322 |
| MluCI | AATT | 1 cut(s) | 298 |
| MlyI | GAGTC | 1 cut(s) | 334 |
| MnlI | CCTC | 5 cut(s) | 41, 165, 307, 375, 426 |
| MseI | TTAA | 2 cut(s) | 279, 345 |
| MslI | CAYNNNNRTG | 2 cut(s) | 173, 307 |
| MspA1I | CMGCKG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 54 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIV | GGNNCC | 1 cut(s) | 363 |
| PfeI | GAWTC | 2 cut(s) | 178, 208 |
| PkrI | GCNGC | 4 cut(s) | 56, 76, 101, 414 |
| Ple19I | CGATCG | 1 cut(s) | 61 |
| PleI | GAGTC | 1 cut(s) | 334 |
| PmaCI | CACGTG | 1 cut(s) | 305 |
| PmlI | CACGTG | 1 cut(s) | 305 |
| PpsI | GAGTC | 1 cut(s) | 334 |
| Ppu21I | YACGTR | 1 cut(s) | 305 |
| PsiI | TTATAA | 1 cut(s) | 297 |
| PspCI | CACGTG | 1 cut(s) | 305 |
| PspN4I | GGNNCC | 1 cut(s) | 363 |
| PspPI | GGNCC | 1 cut(s) | 16 |
| PvuI | CGATCG | 1 cut(s) | 61 |
| RseI | CAYNNNNRTG | 2 cut(s) | 173, 307 |
| SaqAI | TTAA | 2 cut(s) | 279, 345 |
| SatI | GCNGC | 4 cut(s) | 55, 75, 100, 413 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| Sau96I | GGNCC | 1 cut(s) | 16 |
| SchI | GAGTC | 1 cut(s) | 334 |
| SetI | ASST | 9 cut(s) | 18, 27, 136, 201, 271, 307, 363, 385, 398 |
| SinI | GGWCC | 1 cut(s) | 16 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 173, 307 |
| Sse9I | AATT | 1 cut(s) | 298 |
| SsiI | CCGC | 3 cut(s) | 54, 75, 99 |
| SspMI | CTAG | 3 cut(s) | 200, 336, 387 |
| StyI | CCWWGG | 2 cut(s) | 69, 357 |
| TaiI | ACGT | 1 cut(s) | 307 |
| TasI | AATT | 1 cut(s) | 298 |
| TauI | GCSGC | 3 cut(s) | 57, 77, 102 |
| TfiI | GAWTC | 2 cut(s) | 178, 208 |
| Tru1I | TTAA | 2 cut(s) | 279, 345 |
| Tru9I | TTAA | 2 cut(s) | 279, 345 |
| TseI | GCWGC | 1 cut(s) | 412 |
| TspDTI | ATGAA | 3 cut(s) | 157, 191, 246 |
| TspGWI | ACGGA | 1 cut(s) | 31 |
| VpaK11BI | GGWCC | 1 cut(s) | 16 |
| XspI | CTAG | 3 cut(s) | 200, 336, 387 |