belongs to the protein kinase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0353941 RchiOBHm_Chr4g0399951 RchiOBHm_Chr7g0205211 |
| rosa_laevigata | RLG00000003393 |
| rosa_multiflora | Rmu_sc0001072.1_g000010 Rmu_sc0009349.1_g000005 |
| rosa_samantha | Rh1BG222300 Rh1DG249000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 50 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 280 |
| AccI | GTMKAC | 1 cut(s) | 200 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AfaI | GTAC | 1 cut(s) | 264 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 40, 152 |
| AgsI | TTSAA | 1 cut(s) | 70 |
| AluBI | AGCT | 5 cut(s) | 38, 46, 65, 136, 184 |
| AluI | AGCT | 5 cut(s) | 38, 46, 65, 136, 184 |
| Alw26I | GTCTC | 2 cut(s) | 231, 288 |
| AoxI | GGCC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 3 cut(s) | 31, 105, 187 |
| AsuHPI | GGTGA | 2 cut(s) | 173, 283 |
| AvaII | GGWCC | 2 cut(s) | 31, 187 |
| BcoDI | GTCTC | 2 cut(s) | 231, 288 |
| BfaI | CTAG | 2 cut(s) | 35, 62 |
| Bme18I | GGWCC | 2 cut(s) | 31, 187 |
| BmgT120I | GGNCC | 3 cut(s) | 31, 105, 187 |
| BmiI | GGNNCC | 2 cut(s) | 32, 107 |
| BmsI | GCATC | 2 cut(s) | 215, 247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 268, 300 |
| BpmI | CTGGAG | 1 cut(s) | 287 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 40, 152 |
| Bse1I | ACTGG | 2 cut(s) | 58, 270 |
| BseGI | GGATG | 1 cut(s) | 238 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 40, 152 |
| BseNI | ACTGG | 2 cut(s) | 58, 270 |
| BshFI | GGCC | 1 cut(s) | 106 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 40, 152 |
| BsmAI | GTCTC | 2 cut(s) | 231, 288 |
| BsnI | GGCC | 1 cut(s) | 106 |
| BspANI | GGCC | 1 cut(s) | 106 |
| BspHI | TCATGA | 1 cut(s) | 246 |
| BspLI | GGNNCC | 2 cut(s) | 32, 107 |
| BsrI | ACTGG | 2 cut(s) | 58, 270 |
| Bst4CI | ACNGT | 1 cut(s) | 225 |
| BstF5I | GGATG | 1 cut(s) | 238 |
| BstMAI | GTCTC | 2 cut(s) | 231, 288 |
| BsuRI | GGCC | 1 cut(s) | 106 |
| BtsCI | GGATG | 1 cut(s) | 238 |
| CciI | TCATGA | 1 cut(s) | 246 |
| Cfr13I | GGNCC | 3 cut(s) | 31, 105, 187 |
| Csp6I | GTAC | 1 cut(s) | 263 |
| CviAII | CATG | 1 cut(s) | 247 |
| CviJI | RGCY | 7 cut(s) | 38, 46, 65, 87, 106, 136, 184 |
| CviKI_1 | RGCY | 7 cut(s) | 38, 46, 65, 87, 106, 136, 184 |
| CviQI | GTAC | 1 cut(s) | 263 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 280 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 280 |
| Eco47I | GGWCC | 2 cut(s) | 31, 187 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| EcoO109I | RGGNCCY | 2 cut(s) | 31, 105 |
| EcoT22I | ATGCAT | 1 cut(s) | 218 |
| FaeI | CATG | 1 cut(s) | 250 |
| FaiI | YATR | 9 cut(s) | 50, 150, 171, 192, 194, 214, 218, 248, 281 |
| FatI | CATG | 1 cut(s) | 246 |
| FauNDI | CATATG | 1 cut(s) | 192 |
| FblI | GTMKAC | 1 cut(s) | 200 |
| FokI | GGATG | 1 cut(s) | 225 |
| FspBI | CTAG | 2 cut(s) | 35, 62 |
| GsuI | CTGGAG | 1 cut(s) | 287 |
| HaeIII | GGCC | 1 cut(s) | 106 |
| Hin1II | CATG | 1 cut(s) | 250 |
| HincII | GTYRAC | 1 cut(s) | 201 |
| HindII | GTYRAC | 1 cut(s) | 201 |
| HinfI | GANTC | 1 cut(s) | 250 |
| HphI | GGTGA | 2 cut(s) | 173, 283 |
| Hpy166II | GTNNAC | 1 cut(s) | 201 |
| Hpy188I | TCNGA | 1 cut(s) | 12 |
| Hpy188III | TCNNGA | 1 cut(s) | 247 |
| Hpy8I | GTNNAC | 1 cut(s) | 201 |
| HpyCH4III | ACNGT | 1 cut(s) | 225 |
| HpyCH4V | TGCA | 3 cut(s) | 206, 216, 238 |
| Hsp92II | CATG | 1 cut(s) | 250 |
| LmnI | GCTCC | 2 cut(s) | 43, 133 |
| LpnPI | CCDG | 5 cut(s) | 39, 122, 170, 239, 251 |
| LweI | GCATC | 2 cut(s) | 215, 247 |
| MaeI | CTAG | 2 cut(s) | 35, 62 |
| MaeIII | GTNAC | 2 cut(s) | 161, 271 |
| MboII | GAAGA | 1 cut(s) | 68 |
| MluCI | AATT | 1 cut(s) | 70 |
| MlyI | GAGTC | 1 cut(s) | 259 |
| MnlI | CCTC | 4 cut(s) | 137, 252, 253, 262 |
| Mph1103I | ATGCAT | 1 cut(s) | 218 |
| MseI | TTAA | 2 cut(s) | 114, 141 |
| MslI | CAYNNNNRTG | 1 cut(s) | 211 |
| NdeI | CATATG | 1 cut(s) | 192 |
| NlaIII | CATG | 1 cut(s) | 250 |
| NlaIV | GGNNCC | 2 cut(s) | 32, 107 |
| NmuCI | GTSAC | 2 cut(s) | 161, 271 |
| NsiI | ATGCAT | 1 cut(s) | 218 |
| PagI | TCATGA | 1 cut(s) | 246 |
| PleI | GAGTC | 1 cut(s) | 258 |
| PpsI | GAGTC | 1 cut(s) | 258 |
| PpuMI | RGGWCCY | 1 cut(s) | 31 |
| PsiI | TTATAA | 1 cut(s) | 50 |
| Psp5II | RGGWCCY | 1 cut(s) | 31 |
| PspN4I | GGNNCC | 2 cut(s) | 32, 107 |
| PspPI | GGNCC | 3 cut(s) | 31, 105, 187 |
| PspPPI | RGGWCCY | 1 cut(s) | 31 |
| RsaI | GTAC | 1 cut(s) | 264 |
| RsaNI | GTAC | 1 cut(s) | 263 |
| RseI | CAYNNNNRTG | 1 cut(s) | 211 |
| SalI | GTCGAC | 1 cut(s) | 199 |
| SaqAI | TTAA | 2 cut(s) | 114, 141 |
| Sau96I | GGNCC | 3 cut(s) | 31, 105, 187 |
| SchI | GAGTC | 1 cut(s) | 259 |
| SetI | ASST | 9 cut(s) | 40, 48, 67, 129, 138, 186, 258, 264, 273 |
| SfaNI | GCATC | 2 cut(s) | 215, 247 |
| SinI | GGWCC | 2 cut(s) | 31, 187 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 211 |
| SmlI | CTYRAG | 1 cut(s) | 128 |
| SmoI | CTYRAG | 1 cut(s) | 128 |
| Sse9I | AATT | 1 cut(s) | 70 |
| SspMI | CTAG | 2 cut(s) | 35, 62 |
| TaaI | ACNGT | 1 cut(s) | 225 |
| TaqI | TCGA | 1 cut(s) | 200 |
| TasI | AATT | 1 cut(s) | 70 |
| Tru1I | TTAA | 2 cut(s) | 114, 141 |
| Tru9I | TTAA | 2 cut(s) | 114, 141 |
| TseFI | GTSAC | 2 cut(s) | 161, 271 |
| Tsp45I | GTSAC | 2 cut(s) | 161, 271 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 2 cut(s) | 31, 187 |
| XmiI | GTMKAC | 1 cut(s) | 200 |
| XspI | CTAG | 2 cut(s) | 35, 62 |
| Zsp2I | ATGCAT | 1 cut(s) | 218 |