elongator complex protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0200531 RchiOBHm_Chr7g0200991 |
| rosa_laevigata | RLG00000003706 RLG00000003710 |
| rosa_rugosa | Rorug07G0061200 |
| rosa_samantha | Rh7BG190000 Rh7CG197100 Rh7CG197600 Rh7DG192600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 507 |
| AciI | CCGC | 2 cut(s) | 196, 472 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AcuI | CTGAAG | 1 cut(s) | 444 |
| AfaI | GTAC | 2 cut(s) | 20, 29 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 195, 222 |
| AgsI | TTSAA | 2 cut(s) | 48, 385 |
| AluBI | AGCT | 1 cut(s) | 433 |
| AluI | AGCT | 1 cut(s) | 433 |
| Aor13HI | TCCGGA | 1 cut(s) | 507 |
| AoxI | GGCC | 1 cut(s) | 32 |
| ApeKI | GCWGC | 1 cut(s) | 392 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| AxyI | CCTNAGG | 1 cut(s) | 120 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 117, 149 |
| BbvI | GCAGC | 1 cut(s) | 404 |
| BccI | CCATC | 3 cut(s) | 117, 281, 525 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BfmI | CTRYAG | 1 cut(s) | 242 |
| BisI | GCNGC | 1 cut(s) | 393 |
| BlsI | GCNGC | 1 cut(s) | 394 |
| BmcAI | AGTACT | 1 cut(s) | 29 |
| BmiI | GGNNCC | 3 cut(s) | 212, 227, 480 |
| BmsI | GCATC | 1 cut(s) | 246 |
| BpuEI | CTTGAG | 1 cut(s) | 203 |
| BsaWI | WCCGGW | 1 cut(s) | 507 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 195, 222 |
| Bse1I | ACTGG | 2 cut(s) | 35, 102 |
| Bse21I | CCTNAGG | 1 cut(s) | 120 |
| BseAI | TCCGGA | 1 cut(s) | 507 |
| BseGI | GGATG | 2 cut(s) | 261, 292 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 195, 222 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BseNI | ACTGG | 2 cut(s) | 35, 102 |
| BseRI | GAGGAG | 1 cut(s) | 238 |
| BseXI | GCAGC | 1 cut(s) | 404 |
| BsgI | GTGCAG | 2 cut(s) | 220, 315 |
| Bsh1285I | CGRYCG | 1 cut(s) | 447 |
| BshFI | GGCC | 1 cut(s) | 34 |
| BsiEI | CGRYCG | 1 cut(s) | 447 |
| BsiSI | CCGG | 1 cut(s) | 508 |
| BslFI | GGGAC | 1 cut(s) | 171 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 195, 222 |
| BsmFI | GGGAC | 1 cut(s) | 171 |
| BsmI | GAATGC | 2 cut(s) | 92, 380 |
| BsnI | GGCC | 1 cut(s) | 34 |
| Bsp13I | TCCGGA | 1 cut(s) | 507 |
| Bsp1407I | TGTACA | 1 cut(s) | 18 |
| BspACI | CCGC | 2 cut(s) | 196, 472 |
| BspANI | GGCC | 1 cut(s) | 34 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspEI | TCCGGA | 1 cut(s) | 507 |
| BspLI | GGNNCC | 3 cut(s) | 212, 227, 480 |
| BsrGI | TGTACA | 1 cut(s) | 18 |
| BsrI | ACTGG | 2 cut(s) | 35, 102 |
| Bst4CI | ACNGT | 1 cut(s) | 138 |
| BstAUI | TGTACA | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 1 cut(s) | 92 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstF5I | GGATG | 2 cut(s) | 261, 292 |
| BstMCI | CGRYCG | 1 cut(s) | 447 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 234, 276, 478 |
| BstSFI | CTRYAG | 1 cut(s) | 242 |
| BstV1I | GCAGC | 1 cut(s) | 404 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 139 |
| Bsu36I | CCTNAGG | 1 cut(s) | 120 |
| BsuRI | GGCC | 1 cut(s) | 34 |
| BtsCI | GGATG | 2 cut(s) | 261, 292 |
| Cac8I | GCNNGC | 1 cut(s) | 92 |
| Csp6I | GTAC | 2 cut(s) | 19, 28 |
| CviAII | CATG | 2 cut(s) | 52, 190 |
| CviJI | RGCY | 7 cut(s) | 34, 228, 336, 361, 395, 433, 481 |
| CviKI_1 | RGCY | 7 cut(s) | 34, 228, 336, 361, 395, 433, 481 |
| CviQI | GTAC | 2 cut(s) | 19, 28 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| EciI | GGCGGA | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 1 cut(s) | 444 |
| Eco81I | CCTNAGG | 1 cut(s) | 120 |
| EcoRI | GAATTC | 1 cut(s) | 101 |
| FaeI | CATG | 2 cut(s) | 55, 193 |
| FaiI | YATR | 6 cut(s) | 53, 60, 134, 175, 177, 191 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 74, 106 |
| FaqI | GGGAC | 1 cut(s) | 171 |
| FatI | CATG | 2 cut(s) | 51, 189 |
| FauI | CCCGC | 1 cut(s) | 465 |
| Fnu4HI | GCNGC | 1 cut(s) | 393 |
| FokI | GGATG | 2 cut(s) | 268, 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 393 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 393 |
| HaeIII | GGCC | 1 cut(s) | 34 |
| HapII | CCGG | 1 cut(s) | 508 |
| Hin1II | CATG | 2 cut(s) | 55, 193 |
| HinfI | GANTC | 3 cut(s) | 62, 143, 149 |
| HpaII | CCGG | 1 cut(s) | 508 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 5 cut(s) | 119, 208, 220, 422, 508 |
| HpyAV | CCTTC | 3 cut(s) | 244, 505, 509 |
| HpyCH4III | ACNGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 8 cut(s) | 69, 94, 237, 270, 296, 351, 380, 522 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 234, 276, 478 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Hsp92II | CATG | 2 cut(s) | 55, 193 |
| Kpn2I | TCCGGA | 1 cut(s) | 507 |
| LmnI | GCTCC | 2 cut(s) | 225, 478 |
| Lsp1109I | GCAGC | 1 cut(s) | 404 |
| LweI | GCATC | 1 cut(s) | 246 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeIII | GTNAC | 2 cut(s) | 127, 327 |
| MboII | GAAGA | 1 cut(s) | 25 |
| MluCI | AATT | 4 cut(s) | 42, 101, 162, 346 |
| MmeI | TCCRAC | 1 cut(s) | 120 |
| MnlI | CCTC | 6 cut(s) | 48, 115, 216, 227, 239, 240 |
| MroI | TCCGGA | 1 cut(s) | 507 |
| MseI | TTAA | 1 cut(s) | 345 |
| MspI | CCGG | 1 cut(s) | 508 |
| Mva1269I | GAATGC | 2 cut(s) | 92, 380 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 234, 276, 478 |
| NlaIII | CATG | 2 cut(s) | 55, 193 |
| NlaIV | GGNNCC | 3 cut(s) | 212, 227, 480 |
| NmuCI | GTSAC | 2 cut(s) | 127, 327 |
| PctI | GAATGC | 2 cut(s) | 92, 380 |
| PfeI | GAWTC | 3 cut(s) | 62, 143, 149 |
| PkrI | GCNGC | 1 cut(s) | 394 |
| PspN4I | GGNNCC | 3 cut(s) | 212, 227, 480 |
| RsaI | GTAC | 2 cut(s) | 20, 29 |
| RsaNI | GTAC | 2 cut(s) | 19, 28 |
| SaqAI | TTAA | 1 cut(s) | 345 |
| SatI | GCNGC | 1 cut(s) | 393 |
| ScaI | AGTACT | 1 cut(s) | 29 |
| SetI | ASST | 4 cut(s) | 9, 59, 435, 441 |
| SfaNI | GCATC | 1 cut(s) | 246 |
| SfcI | CTRYAG | 1 cut(s) | 242 |
| SmlI | CTYRAG | 1 cut(s) | 218 |
| SmoI | CTYRAG | 1 cut(s) | 218 |
| Sse9I | AATT | 4 cut(s) | 42, 101, 162, 346 |
| SsiI | CCGC | 2 cut(s) | 196, 472 |
| SspMI | CTAG | 1 cut(s) | 36 |
| TaaI | ACNGT | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 443 |
| TaqII | GACCGA | 1 cut(s) | 461 |
| TasI | AATT | 4 cut(s) | 42, 101, 162, 346 |
| TatI | WGTACW | 2 cut(s) | 18, 27 |
| TfiI | GAWTC | 3 cut(s) | 62, 143, 149 |
| Tru1I | TTAA | 1 cut(s) | 345 |
| Tru9I | TTAA | 1 cut(s) | 345 |
| TseFI | GTSAC | 2 cut(s) | 127, 327 |
| TseI | GCWGC | 1 cut(s) | 392 |
| Tsp45I | GTSAC | 2 cut(s) | 127, 327 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 36 |
| ZrmI | AGTACT | 1 cut(s) | 29 |