Rh7CG197600

elongator complex protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
17517049 .. 17529353
12305 bp
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UTR
Exon/CDS
Intron
Rh7CG197600.1

Sequence Viewer

Length: 387 bp
ATGTGGTGGATGATATTCAGGAAGCCCCTCAAGAGGAGCCTCAACCGCACTCCGCAGAAGGGGATGCTATCCCTGTGCAACCAGAGCAAGGGGATGCTCTCTCTGAGCCATAAGAGAAAACAGATACTCTCTCTGTTTACCAAGAGCAAGGTGATACTTTCTCTGGGCTTTAGGGTTGTGCAGACTGCTCAAATTTTGACTACGCTTCCGGGTCACAAGGCTTCTGTTAATTGCACTCAATGGCTTCCAAGTAATAAGTTTTTCAAAGCTACAGCATGTTTCAATCACAGCCATCTGTCTGAAAATGAGGCTATCACGCATGGAATGGAGGTTCGTAATAATAAGGAGGAAAAACTAAATCACAGCTCACTCATCTTTACTAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000502 GO:0001101 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006354 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0008023 GO:0008047 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009737 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010604 GO:0010950 GO:0010952 GO:0016043 GO:0016070 GO:0016504 GO:0018130 GO:0019222 GO:0019438 GO:0022607 GO:0030162 GO:0030234 GO:0031248 GO:0031323 GO:0031325 GO:0031347 GO:0031349 GO:0031537 GO:0031538 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032774 GO:0032991 GO:0033588 GO:0033993 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0042127 GO:0042221 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043248 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045862 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048831 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0052547 GO:0052548 GO:0060255 GO:0061133 GO:0061134 GO:0061135 GO:0065003 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0097305 GO:0097659 GO:0098772 GO:1901360 GO:1901362 GO:1901576 GO:1901700 GO:1902493 GO:1902494 GO:1905368 GO:1905369 GO:1990234 GO:2000024 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.7

Weight (kDa)

10.51

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019035)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 46, 53
AcsI RAATTY 1 cut(s) 192
AfiI CCNNNNNNNGG 3 cut(s) 33, 59, 88
AgsI TTSAA 2 cut(s) 265, 283
AloI GAACNNNNNNTCC 2 cut(s) 315, 347
AluBI AGCT 2 cut(s) 269, 366
AluI AGCT 2 cut(s) 269, 366
ApoI RAATTY 1 cut(s) 192
AsuC2I CCSGG 1 cut(s) 210
AsuHPI GGTGA 1 cut(s) 163
BccI CCATC 1 cut(s) 300
BcnI CCSGG 1 cut(s) 210
BfaI CTAG 1 cut(s) 385
BfmI CTRYAG 1 cut(s) 270
Bme1390I CCNGG 1 cut(s) 210
BmiI GGNNCC 1 cut(s) 38
BmrFI CCNGG 1 cut(s) 210
BmsI GCATC 2 cut(s) 54, 84
BpuEI CTTGAG 1 cut(s) 14
BpuMI CCSGG 1 cut(s) 210
Bsc4I CCNNNNNNNGG 3 cut(s) 33, 59, 88
BseGI GGATG 3 cut(s) 15, 69, 99
BseLI CCNNNNNNNGG 3 cut(s) 33, 59, 88
BseMII CTCAG 1 cut(s) 95
BseRI GAGGAG 1 cut(s) 49
BsgI GTGCAG 1 cut(s) 200
BsiSI CCGG 1 cut(s) 209
BslI CCNNNNNNNGG 3 cut(s) 33, 59, 88
BspACI CCGC 2 cut(s) 46, 53
BspCNI CTCAG 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 38
BstDEI CTNAG 1 cut(s) 104
BstF5I GGATG 3 cut(s) 15, 69, 99
BstMWI GCNNNNNNNGC 2 cut(s) 45, 84
BstNSI RCATGY 1 cut(s) 279
BstSCI CCNGG 1 cut(s) 208
BstSFI CTRYAG 1 cut(s) 270
BtsCI GGATG 3 cut(s) 15, 69, 99
CviAII CATG 2 cut(s) 276, 320
DdeI CTNAG 1 cut(s) 104
FaeI CATG 2 cut(s) 279, 323
FaiI YATR 3 cut(s) 111, 277, 321
FatI CATG 2 cut(s) 275, 319
FokI GGATG 3 cut(s) 22, 76, 106
FspBI CTAG 1 cut(s) 385
HapII CCGG 1 cut(s) 209
Hin1II CATG 2 cut(s) 279, 323
HpaII CCGG 1 cut(s) 209
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 1 cut(s) 138
Hpy188I TCNGA 2 cut(s) 105, 301
Hpy188III TCNNGA 2 cut(s) 19, 31
Hpy8I GTNNAC 1 cut(s) 138
HpyAV CCTTC 1 cut(s) 52
HpyCH4V TGCA 3 cut(s) 78, 181, 234
HpyF10VI GCNNNNNNNGC 2 cut(s) 45, 84
HpyF3I CTNAG 1 cut(s) 104
Hsp92II CATG 2 cut(s) 279, 323
LmnI GCTCC 1 cut(s) 36
LpnPI CCDG 5 cut(s) 4, 86, 95, 149, 222
LweI GCATC 2 cut(s) 54, 84
MaeI CTAG 1 cut(s) 385
MaeIII GTNAC 1 cut(s) 212
MluCI AATT 2 cut(s) 192, 229
MnlI CCTC 6 cut(s) 27, 38, 50, 301, 322, 340
MseI TTAA 1 cut(s) 228
MspI CCGG 1 cut(s) 209
MspR9I CCNGG 1 cut(s) 210
MwoI GCNNNNNNNGC 2 cut(s) 45, 84
NciI CCSGG 1 cut(s) 210
NlaIII CATG 2 cut(s) 279, 323
NlaIV GGNNCC 1 cut(s) 38
NmuCI GTSAC 1 cut(s) 212
NspI RCATGY 1 cut(s) 279
PspN4I GGNNCC 1 cut(s) 38
SaqAI TTAA 1 cut(s) 228
ScrFI CCNGG 1 cut(s) 210
SetI ASST 4 cut(s) 153, 271, 333, 368
SfaNI GCATC 2 cut(s) 54, 84
SfcI CTRYAG 1 cut(s) 270
SmlI CTYRAG 1 cut(s) 29
SmoI CTYRAG 1 cut(s) 29
Sse9I AATT 2 cut(s) 192, 229
SsiI CCGC 2 cut(s) 46, 53
SspMI CTAG 1 cut(s) 385
StyD4I CCNGG 1 cut(s) 208
TasI AATT 2 cut(s) 192, 229
Tru1I TTAA 1 cut(s) 228
Tru9I TTAA 1 cut(s) 228
TseFI GTSAC 1 cut(s) 212
Tsp45I GTSAC 1 cut(s) 212
XapI RAATTY 1 cut(s) 192
XceI RCATGY 1 cut(s) 279
XspI CTAG 1 cut(s) 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.