Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0007922

Physical Location & Seq

Genomic Coordinates Forward (+)

61297177 .. 61302015

Gene Structure 4839 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004668

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGGAAACTGCTGCTCCGACGACGCCGGCGGCCAGACGGCCGTCGGCGGCACCGCCGCTTCTCACGGAAATCCCAACGACGCTCACAACGACGCCGTCGATCACCTCCTCAAGACCCGAGGCTACCACGGCCTCTTCTCTCAGATCGAGTTATCCTTGGCTGCTGTAGACTTGCGTGATCGGGACGTGCTCTCAAAGAGTGATCCCATGGTGGTCGTATATACAAAAGGAAGAGATGGAGGGCTTGTAGAGCTTGGCCGCACAGAAGTAGTTCTAAATTCATTAAATCCGAAATGGATCACAAAGCACAATGTCACTTATCATTTTGAGGTCGTACAGACTTTGGTGTTTCGCGTGTATGATGTCGATACTCAGTTTCACAATGTGGAAGTGAAGATGCTTAAGCTAGATGAGCAACAATTTCTTGGCGAGACAACTTGTGCATTGTCAGAGATAGTTGCAAAATCAGACAGATTTTTAACCCTGGATCTTGTATATAGAGAGGAATCGAGCAGACCAAACCGTCATCAAAACCGTGGAAAGCTCATTGTGCATGCTGAGGAGTCTGTTAGCTCAAAGACAACGATTGAGATGAGTTTGAGGTGTTTAGATTTGGAATACAAGGATCTCTTCTCGAAAAGTGACCCTTTTTTGGTAATATCAAAAATTGCGGATAGTGGGATCACAATTCCAGTTTGCAAAACAGAAGTCATAAAGAATGAACTCAAACCTGCATGGAAGCCAATATATTTGAATATTCAACAAGTTGGAAGCAAGGACAGCCCCTTGATAATAGAGTGTTTTAACTTCAACAACAATGGCAAACATGATTTGATTGGAAAAGCTCAAAAATCACTGGCTGACCTGGAAAAGCTTCATGCTAGTGGACAAGGAGAAAATTTATTTATACCTGCTGGGCATGATCACCACAACAAGACACTGAAGAGTCAACTATTTGTGGACAAGTTTACTGAGAGTGTTCAACACACGTTCCTTGATTACTTGGCTGGGGGCTGTGAATTAAATTTCATGGTGGCTGTTGATTTTACAGCTTCAAATGGGAACCCTCGCCTGCCCGATTCTTTGCATTATATAGATCCTTCAGGAAGAACCAATGCATACCAGAGAGCAATCATTGAGGTTGTGGAGGTGTTGCAGTTTTATGATTCAGACAAGCGCTTTCCAGCCTGGGGATTTGGAGCCCGACCAATTGATGGTCCAGTTTCTCATTGCTTCAACTTGAATGGGAGTAGTCATCACTGTGAGGTTGAAGGAATCCAAGGAATTATGGTGGCATATTCAAGTGCCCTCCAAAATGTTTCTCTTGCTGGACCAACTCTTTTTGGACCCATAATCACTACTGCTGCATCAATTGCCAGCCAGTCTCTTGCAAATGGTGGACAAAAATACTTCGTTTTGTTAATAATCACGGATGGTGTAGTCACAGATCTCCAAGAAACCAAAGATGCCCTCGTGAAAGCATCTGACCTGCCATTGTCAATCCTCATTGTTGGAGTAGGAGGAGCTGACTTCAAAGAAATGGAGATTTTGGATGCTGACAAGGGTGACAGGCTTGAAAGTACGACTGGGCGTGTTGCTTCACGTGATATAGTGCAGTTTGTTCCATTCCGAGATGTACAAAGTGGAGAAATTTCCGTTGTTCAGGCGCTTTTAGCAGAATTACCATCTCAGTTTCTGACTTACATGCGATCCAGAAATATTAAACCAAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005543 GO:0005544 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0008150 GO:0008289 GO:0008361 GO:0009266 GO:0009270 GO:0009415 GO:0009506 GO:0009628 GO:0009987 GO:0010035 GO:0010941 GO:0016020 GO:0016043 GO:0030054 GO:0032535 GO:0042221 GO:0043167 GO:0043168 GO:0044464 GO:0045793 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0055044 GO:0060548 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 Copine Dev_Cell_Death

Protein Analysis

579

Amino Acids

63.61

Weight (kDa)

5.57

Isoelectric Point (pI)

32.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	54 - 155	5.7e-11	C2 domain
C2	PF00168	200 - 292	7.4e-11	C2 domain
Copine	PF07002	361 - 576	1.6e-82	Copine

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007922)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07300 AT5G61900 AT5G61900
fragaria_vesca	FvH4_5g09500 FvH4_5g09500 FvH4_5g09500
malus_domestica	MD06G1130500.v1.1 MD14G1147300.v1.1
prunus_persica	Prupe.5G141800_v2.0.a1 Prupe.5G141800_v2.0.a1 Prupe.5G141800_v2.0.a1 Prupe.5G141800_v2.0.a1 Prupe.5G141800_v2.0.a1 Prupe.5G141800_v2.0.a1
pyrus_communis	pycom06g12230 pycom14g12200
rosa_chinensis	RchiOBHm_Chr7g0188701
rosa_laevigata	RLG00000004668
rosa_roxburghii	Rroxscaffold_3G00266120
rosa_rugosa	Rorug06G0492400 Rorug06G0492500 Rorug06G0492600
rosa_samantha	Rh7CG100900
rosa_wichuraiana	Rw7G008420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	522
Acc36I	ACCTGC	3 cut(s)	739, 919, 1497
AccB1I	GGYRCC	1 cut(s)	50
AccB7I	CCANNNNNTGG	1 cut(s)	1214
AccI	GTMKAC	1 cut(s)	168
AccII	CGCG	1 cut(s)	354
AciI	CCGC	6 cut(s)	30, 48, 54, 57, 259, 671
AclWI	GGATC	7 cut(s)	197, 305, 495, 633, 689, 1091, 1704
AcoI	YGGCCR	3 cut(s)	31, 39, 256
AcsI	RAATTY	5 cut(s)	277, 898, 1024, 1650, 1729
AcuI	CTGAAG	2 cut(s)	962, 1086
AcvI	CACGTG	1 cut(s)	1604
AcyI	GRCGYC	2 cut(s)	24, 93
AdeI	CACNNNGTG	1 cut(s)	385
AfaI	GTAC	3 cut(s)	336, 1582, 1638
AfeI	AGCGCT	1 cut(s)	1178
AfiI	CCNNNNNNNGG	3 cut(s)	652, 1190, 1214
AflII	CTTAAG	1 cut(s)	401
AflIII	ACRYGT	1 cut(s)	987
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	3 cut(s)	483, 864, 1187
AluBI	AGCT	8 cut(s)	253, 406, 544, 573, 845, 874, 1052, 1526
AluI	AGCT	8 cut(s)	253, 406, 544, 573, 845, 874, 1052, 1526
Alw21I	GWGCWC	1 cut(s)	192
Alw26I	GTCTC	2 cut(s)	425, 1389
AlwI	GGATC	7 cut(s)	197, 305, 495, 633, 689, 1091, 1704
AlwNI	CAGNNNCTG	1 cut(s)	1696
Ama87I	CYCGRG	1 cut(s)	117
Aor51HI	AGCGCT	1 cut(s)	1178
AoxI	GGCC	4 cut(s)	31, 39, 130, 256
ApeKI	GCWGC	3 cut(s)	12, 161, 1364
ApoI	RAATTY	5 cut(s)	277, 898, 1024, 1650, 1729
ArsI	GACNNNNNNTTYG	2 cut(s)	693, 725
Asp700I	GAANNNNTTC	2 cut(s)	270, 873
AspLEI	GCGC	2 cut(s)	1179, 1669
AspS9I	GGNCC	3 cut(s)	1217, 1331, 1346
AsuHPI	GGTGA	3 cut(s)	95, 917, 1577
AvaI	CYCGRG	1 cut(s)	117
AvaII	GGWCC	3 cut(s)	1217, 1331, 1346
BaeGI	GKGCMC	1 cut(s)	1309
BanI	GGYRCC	1 cut(s)	50
BanII	GRGCYC	1 cut(s)	1204
BauI	CACGAG	1 cut(s)	1472
BbrPI	CACGTG	1 cut(s)	1604
Bbv12I	GWGCWC	1 cut(s)	192
BbvCI	CCTCAGC	1 cut(s)	558
BbvI	GCAGC	2 cut(s)	148, 1351
BccI	CCATC	4 cut(s)	230, 1208, 1427, 1693
BceAI	ACGGC	4 cut(s)	26, 54, 80, 145
BciT130I	CCWGG	3 cut(s)	485, 866, 1189
BclI	TGATCA	1 cut(s)	922
BcoDI	GTCTC	2 cut(s)	425, 1389
BfaI	CTAG	2 cut(s)	407, 882
BfmI	CTRYAG	1 cut(s)	165
BfoI	RGCGCY	2 cut(s)	1180, 1670
BfrI	CTTAAG	1 cut(s)	401
BfuAI	ACCTGC	3 cut(s)	739, 919, 1497
BglII	AGATCT	1 cut(s)	1447
BisI	GCNGC	7 cut(s)	13, 31, 49, 57, 162, 259, 1365
BlsI	GCNGC	7 cut(s)	14, 32, 50, 58, 163, 260, 1366
Bme1390I	CCNGG	3 cut(s)	485, 866, 1189
Bme18I	GGWCC	3 cut(s)	1217, 1331, 1346
BmeT110I	CYCGRG	1 cut(s)	117
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	3 cut(s)	1217, 1331, 1346
BmiI	GGNNCC	4 cut(s)	52, 1064, 1201, 1348
BmrFI	CCNGG	3 cut(s)	485, 866, 1189
BmrI	ACTGGG	1 cut(s)	1596
BmsI	GCATC	5 cut(s)	387, 1376, 1456, 1490, 1543
BmuI	ACTGGG	1 cut(s)	1596
BoxI	GACNNNNGTC	1 cut(s)	41
Bpu10I	CCTNAGC	1 cut(s)	558
BpuEI	CTTGAG	1 cut(s)	95
BsaAI	YACGTR	1 cut(s)	1604
BsaHI	GRCGYC	2 cut(s)	24, 93
BsaJI	CCNNGG	8 cut(s)	118, 127, 156, 207, 483, 535, 1188, 1279
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 231, 261
Bsc4I	CCNNNNNNNGG	3 cut(s)	652, 1190, 1214
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	5 cut(s)	692, 861, 1220, 1381, 1591
Bse3DI	GCAATG	1 cut(s)	1228
BseBI	CCWGG	3 cut(s)	485, 866, 1189
BseDI	CCNNGG	8 cut(s)	118, 127, 156, 207, 483, 535, 1188, 1279
BseGI	GGATG	2 cut(s)	1438, 1558
BseLI	CCNNNNNNNGG	3 cut(s)	652, 1190, 1214
BseMI	GCAATG	1 cut(s)	1228
BseMII	CTCAG	5 cut(s)	155, 386, 549, 963, 1703
BseNI	ACTGG	5 cut(s)	692, 861, 1220, 1381, 1591
BseRI	GAGGAG	3 cut(s)	98, 575, 1536
BseSI	GKGCMC	1 cut(s)	1309
BseX3I	CGGCCG	1 cut(s)	39
BseXI	GCAGC	2 cut(s)	148, 1351
BseYI	CCCAGC	2 cut(s)	914, 1007
BsgI	GTGCAG	1 cut(s)	1634
Bsh1236I	CGCG	1 cut(s)	354
Bsh1285I	CGRYCG	1 cut(s)	42
BshFI	GGCC	4 cut(s)	33, 41, 132, 258
BshNI	GGYRCC	1 cut(s)	50
BsiEI	CGRYCG	1 cut(s)	42
BsiHKAI	GWGCWC	1 cut(s)	192
BsiHKCI	CYCGRG	1 cut(s)	117
BsiSI	CCGG	1 cut(s)	27
BslFI	GGGAC	1 cut(s)	197
BslI	CCNNNNNNNGG	3 cut(s)	652, 1190, 1214
BsmAI	GTCTC	2 cut(s)	425, 1389
BsmFI	GGGAC	1 cut(s)	197
BsnI	GGCC	4 cut(s)	33, 41, 132, 258
BsoBI	CYCGRG	1 cut(s)	117
Bsp1286I	GDGCHC	3 cut(s)	192, 1204, 1309
Bsp1407I	TGTACA	1 cut(s)	1636
Bsp19I	CCATGG	1 cut(s)	207
BspACI	CCGC	6 cut(s)	30, 48, 54, 57, 259, 671
BspANI	GGCC	4 cut(s)	33, 41, 132, 258
BspCNI	CTCAG	5 cut(s)	154, 385, 550, 964, 1702
BspFNI	CGCG	1 cut(s)	354
BspLI	GGNNCC	4 cut(s)	52, 1064, 1201, 1348
BspMI	ACCTGC	3 cut(s)	739, 919, 1497
BspPI	GGATC	7 cut(s)	197, 305, 495, 633, 689, 1091, 1704
BspT107I	GGYRCC	1 cut(s)	50
BspTI	CTTAAG	1 cut(s)	401
BsrDI	GCAATG	1 cut(s)	1228
BsrFI	RCCGGY	1 cut(s)	26
BsrGI	TGTACA	1 cut(s)	1636
BsrI	ACTGG	5 cut(s)	692, 861, 1220, 1381, 1591
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	8 cut(s)	118, 127, 156, 207, 483, 535, 1188, 1279
BssNI	GRCGYC	2 cut(s)	24, 93
BssSI	CACGAG	1 cut(s)	1472
BssT1I	CCWWGG	3 cut(s)	156, 207, 1279
Bst2BI	CACGAG	1 cut(s)	1472
Bst2UI	CCWGG	3 cut(s)	485, 866, 1189
Bst4CI	ACNGT	3 cut(s)	524, 536, 1262
Bst6I	CTCTTC	4 cut(s)	140, 226, 635, 938
BstACI	GRCGYC	2 cut(s)	24, 93
BstAFI	CTTAAG	1 cut(s)	401
BstAPI	GCANNNNNTGC	1 cut(s)	1373
BstAUI	TGTACA	1 cut(s)	1636
BstBAI	YACGTR	1 cut(s)	1604
BstC8I	GCNNGC	4 cut(s)	28, 555, 1073, 1378
BstDEI	CTNAG	5 cut(s)	141, 372, 558, 972, 1689
BstDSI	CCRYGG	3 cut(s)	127, 207, 535
BstF5I	GGATG	2 cut(s)	1438, 1558
BstFNI	CGCG	1 cut(s)	354
BstH2I	RGCGCY	2 cut(s)	1180, 1670
BstHHI	GCGC	2 cut(s)	1179, 1669
BstMAI	GTCTC	2 cut(s)	425, 1389
BstMCI	CGRYCG	1 cut(s)	42
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 250, 412, 550, 780, 1373, 1673
BstNI	CCWGG	3 cut(s)	485, 866, 1189
BstNSI	RCATGY	2 cut(s)	557, 1708
BstPAI	GACNNNNGTC	1 cut(s)	41
BstSCI	CCNGG	3 cut(s)	483, 864, 1187
BstSFI	CTRYAG	1 cut(s)	165
BstSLI	GKGCMC	1 cut(s)	1309
BstUI	CGCG	1 cut(s)	354
BstV1I	GCAGC	2 cut(s)	148, 1351
BstX2I	RGATCY	4 cut(s)	487, 625, 1096, 1447
BstYI	RGATCY	4 cut(s)	487, 625, 1096, 1447
BstZI	CGGCCG	1 cut(s)	39
BsuRI	GGCC	4 cut(s)	33, 41, 132, 258
BtgI	CCRYGG	3 cut(s)	127, 207, 535
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	2 cut(s)	1438, 1558
BtsIMutI	CAGTG	3 cut(s)	854, 938, 1258
BveI	ACCTGC	3 cut(s)	739, 919, 1497
Cac8I	GCNNGC	4 cut(s)	28, 555, 1073, 1378
CaiI	CAGNNNCTG	1 cut(s)	1696
CfoI	GCGC	2 cut(s)	1179, 1669
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	3 cut(s)	1217, 1331, 1346
CseI	GACGC	3 cut(s)	32, 89, 101
Csp6I	GTAC	3 cut(s)	335, 1581, 1637
CviAII	CATG	8 cut(s)	208, 554, 735, 827, 878, 920, 1030, 1705
CviQI	GTAC	3 cut(s)	335, 1581, 1637
DdeI	CTNAG	5 cut(s)	141, 372, 558, 972, 1689
DraIII	CACNNNGTG	1 cut(s)	385
DrdI	GACNNNNNNGTC	1 cut(s)	522
DseDI	GACNNNNNNGTC	1 cut(s)	522
EaeI	YGGCCR	3 cut(s)	31, 39, 256
EagI	CGGCCG	1 cut(s)	39
Eam1104I	CTCTTC	4 cut(s)	140, 226, 635, 938
EarI	CTCTTC	4 cut(s)	140, 226, 635, 938
EclXI	CGGCCG	1 cut(s)	39
Eco130I	CCWWGG	3 cut(s)	156, 207, 1279
Eco24I	GRGCYC	1 cut(s)	1204
Eco47I	GGWCC	3 cut(s)	1217, 1331, 1346
Eco47III	AGCGCT	1 cut(s)	1178
Eco52I	CGGCCG	1 cut(s)	39
Eco57I	CTGAAG	2 cut(s)	962, 1086
Eco72I	CACGTG	1 cut(s)	1604
Eco88I	CYCGRG	1 cut(s)	117
EcoRII	CCWGG	3 cut(s)	483, 864, 1187
EcoT14I	CCWWGG	3 cut(s)	156, 207, 1279
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	1 cut(s)	1204
ErhI	CCWWGG	3 cut(s)	156, 207, 1279
FaeI	CATG	8 cut(s)	211, 557, 738, 830, 881, 923, 1033, 1708
FalI	AAGNNNNNCTT	4 cut(s)	614, 646, 631, 663
FaqI	GGGAC	1 cut(s)	197
FatI	CATG	8 cut(s)	207, 553, 734, 826, 877, 919, 1029, 1704
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	1 cut(s)	168
Fnu4HI	GCNGC	7 cut(s)	13, 31, 49, 57, 162, 259, 1365
FokI	GGATG	2 cut(s)	1445, 1565
FriOI	GRGCYC	1 cut(s)	1204
Fsp4HI	GCNGC	7 cut(s)	13, 31, 49, 57, 162, 259, 1365
FspBI	CTAG	2 cut(s)	407, 882
GlaI	GCGC	2 cut(s)	1178, 1668
GluI	GCNGC	7 cut(s)	13, 31, 49, 57, 162, 259, 1365
GsaI	CCCAGC	2 cut(s)	918, 1011
HaeII	RGCGCY	2 cut(s)	1180, 1670
HaeIII	GGCC	4 cut(s)	33, 41, 132, 258
HapII	CCGG	1 cut(s)	27
HgaI	GACGC	3 cut(s)	32, 89, 101
HhaI	GCGC	2 cut(s)	1179, 1669
Hin1I	GRCGYC	2 cut(s)	24, 93
Hin1II	CATG	8 cut(s)	211, 557, 738, 830, 881, 923, 1033, 1708
Hin6I	GCGC	2 cut(s)	1177, 1667
HinP1I	GCGC	2 cut(s)	1177, 1667
HincII	GTYRAC	1 cut(s)	950
HindII	GTYRAC	1 cut(s)	950
HindIII	AAGCTT	1 cut(s)	872
HinfI	GANTC	6 cut(s)	506, 563, 946, 1079, 1166, 1275
HpaII	CCGG	1 cut(s)	27
HphI	GGTGA	3 cut(s)	95, 917, 1577
Hpy166II	GTNNAC	6 cut(s)	169, 887, 950, 961, 969, 1400
Hpy188I	TCNGA	9 cut(s)	19, 144, 291, 451, 469, 1171, 1486, 1631, 1698
Hpy188III	TCNNGA	6 cut(s)	112, 182, 634, 1104, 1474, 1713
Hpy8I	GTNNAC	6 cut(s)	169, 887, 950, 961, 969, 1400
Hpy99I	CGWCG	6 cut(s)	23, 26, 47, 83, 95, 101
HpyAV	CCTTC	2 cut(s)	1110, 1265
HpyCH4III	ACNGT	3 cut(s)	524, 536, 1262
HpyCH4IV	ACGT	3 cut(s)	186, 989, 1603
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 250, 412, 550, 780, 1373, 1673
HpyF3I	CTNAG	5 cut(s)	141, 372, 558, 972, 1689
HpySE526I	ACGT	3 cut(s)	186, 989, 1603
Hsp92I	GRCGYC	2 cut(s)	24, 93
Hsp92II	CATG	8 cut(s)	211, 557, 738, 830, 881, 923, 1033, 1708
HspAI	GCGC	2 cut(s)	1177, 1667
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Ksp22I	TGATCA	1 cut(s)	922
LmnI	GCTCC	3 cut(s)	20, 1199, 1523
Lsp1109I	GCAGC	2 cut(s)	148, 1351
LweI	GCATC	5 cut(s)	387, 1376, 1456, 1490, 1543
MaeI	CTAG	2 cut(s)	407, 882
MaeII	ACGT	3 cut(s)	186, 989, 1603
MaeIII	GTNAC	4 cut(s)	313, 641, 1441, 1565
MboII	GAAGA	6 cut(s)	127, 243, 406, 622, 955, 1119
MfeI	CAATTG	2 cut(s)	1209, 1371
MflI	RGATCY	4 cut(s)	487, 625, 1096, 1447
MhlI	GDGCHC	3 cut(s)	192, 1204, 1309
MlyI	GAGTC	2 cut(s)	572, 955
MmeI	TCCRAC	3 cut(s)	42, 748, 1492
Mph1103I	ATGCAT	1 cut(s)	1120
MreI	CGCCGGCG	1 cut(s)	26
MroNI	GCCGGC	1 cut(s)	26
MroXI	GAANNNNTTC	2 cut(s)	270, 873
MseI	TTAA	7 cut(s)	284, 402, 479, 804, 1022, 1421, 1722
MslI	CAYNNNNRTG	2 cut(s)	882, 1260
MspCI	CTTAAG	1 cut(s)	401
MspI	CCGG	1 cut(s)	27
MspR9I	CCNGG	3 cut(s)	485, 866, 1189
MunI	CAATTG	2 cut(s)	1209, 1371
MvaI	CCWGG	3 cut(s)	485, 866, 1189
MvnI	CGCG	1 cut(s)	354
MwoI	GCNNNNNNNGC	7 cut(s)	129, 250, 412, 550, 780, 1373, 1673
NaeI	GCCGGC	1 cut(s)	28
NcoI	CCATGG	1 cut(s)	207
NgoMIV	GCCGGC	1 cut(s)	26
NlaIII	CATG	8 cut(s)	211, 557, 738, 830, 881, 923, 1033, 1708
NlaIV	GGNNCC	4 cut(s)	52, 1064, 1201, 1348
NmuCI	GTSAC	4 cut(s)	313, 641, 1441, 1565
NsiI	ATGCAT	1 cut(s)	1120
NspI	RCATGY	2 cut(s)	557, 1708
PaeI	GCATGC	1 cut(s)	557
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 96
PdiI	GCCGGC	1 cut(s)	28
PdmI	GAANNNNTTC	2 cut(s)	270, 873
PfeI	GAWTC	4 cut(s)	506, 1079, 1166, 1275
PflFI	GACNNNGTC	1 cut(s)	95
PflMI	CCANNNNNTGG	1 cut(s)	1214
PkrI	GCNGC	7 cut(s)	14, 32, 50, 58, 163, 260, 1366
PleI	GAGTC	2 cut(s)	571, 954
PmaCI	CACGTG	1 cut(s)	1604
PmlI	CACGTG	1 cut(s)	1604
PpsI	GAGTC	2 cut(s)	571, 954
Ppu21I	YACGTR	1 cut(s)	1604
PshAI	GACNNNNGTC	1 cut(s)	41
Psp6I	CCWGG	3 cut(s)	483, 864, 1187
PspCI	CACGTG	1 cut(s)	1604
PspFI	CCCAGC	2 cut(s)	914, 1007
PspGI	CCWGG	3 cut(s)	483, 864, 1187
PspN4I	GGNNCC	4 cut(s)	52, 1064, 1201, 1348
PspPI	GGNCC	3 cut(s)	1217, 1331, 1346
PstNI	CAGNNNCTG	1 cut(s)	1696
PsuI	RGATCY	4 cut(s)	487, 625, 1096, 1447
PsyI	GACNNNGTC	1 cut(s)	95
RsaI	GTAC	3 cut(s)	336, 1582, 1638
RsaNI	GTAC	3 cut(s)	335, 1581, 1637
RseI	CAYNNNNRTG	2 cut(s)	882, 1260
SaqAI	TTAA	7 cut(s)	284, 402, 479, 804, 1022, 1421, 1722
SatI	GCNGC	7 cut(s)	13, 31, 49, 57, 162, 259, 1365
Sau96I	GGNCC	3 cut(s)	1217, 1331, 1346
SchI	GAGTC	2 cut(s)	572, 955
ScrFI	CCNGG	3 cut(s)	485, 866, 1189
SduI	GDGCHC	3 cut(s)	192, 1204, 1309
SfaNI	GCATC	5 cut(s)	387, 1376, 1456, 1490, 1543
SfcI	CTRYAG	1 cut(s)	165
SgrAI	CRCCGGYG	1 cut(s)	26
SinI	GGWCC	3 cut(s)	1217, 1331, 1346
SmiMI	CAYNNNNRTG	2 cut(s)	882, 1260
SmlI	CTYRAG	2 cut(s)	110, 401
SmoI	CTYRAG	2 cut(s)	110, 401
SphI	GCATGC	1 cut(s)	557
SsiI	CCGC	6 cut(s)	30, 48, 54, 57, 259, 671
SspI	AATATT	2 cut(s)	757, 1720
SspMI	CTAG	2 cut(s)	407, 882
StyD4I	CCNGG	3 cut(s)	483, 864, 1187
StyI	CCWWGG	3 cut(s)	156, 207, 1279
TaaI	ACNGT	3 cut(s)	524, 536, 1262
TaiI	ACGT	3 cut(s)	189, 992, 1606
TaqI	TCGA	5 cut(s)	99, 147, 366, 509, 635
TatI	WGTACW	1 cut(s)	1636
TauI	GCSGC	4 cut(s)	33, 51, 59, 261
TfiI	GAWTC	4 cut(s)	506, 1079, 1166, 1275
Tru1I	TTAA	7 cut(s)	284, 402, 479, 804, 1022, 1421, 1722
Tru9I	TTAA	7 cut(s)	284, 402, 479, 804, 1022, 1421, 1722
TscAI	CASTG	3 cut(s)	861, 945, 1265
TseFI	GTSAC	4 cut(s)	313, 641, 1441, 1565
TseI	GCWGC	3 cut(s)	12, 161, 1364
Tsp45I	GTSAC	4 cut(s)	313, 641, 1441, 1565
TspDTI	ATGAA	4 cut(s)	270, 735, 866, 1018
TspGWI	ACGGA	3 cut(s)	81, 1445, 1645
TspRI	CASTG	3 cut(s)	861, 945, 1265
Tth111I	GACNNNGTC	1 cut(s)	95
Van91I	CCANNNNNTGG	1 cut(s)	1214
Vha464I	CTTAAG	1 cut(s)	401
VpaK11BI	GGWCC	3 cut(s)	1217, 1331, 1346
XapI	RAATTY	5 cut(s)	277, 898, 1024, 1650, 1729
XceI	RCATGY	2 cut(s)	557, 1708
XmiI	GTMKAC	1 cut(s)	168
XmnI	GAANNNNTTC	2 cut(s)	270, 873
XspI	CTAG	2 cut(s)	407, 882
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.