RLG00000012879

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
23428675 .. 23432128
3454 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012879

Sequence Viewer

Length: 2544 bp
ATGCAACACCAGCAGCACCACCAGGGTCGATCTAGCCTGCGAGATTGCTCGAGTACTTCTAGCCCACAAAGCAGACACAACATCATCAAAGGAGAAATCATTATTGTCCAAAGTGATAAAAAATCAGGTTCGGGGAGATCAGCTTCTATTCGGCTATATAGCTGTACAGAAGTCGATCCAAAAACTGGAAAAGGAAAGTTGAGTGAGCAAGCATACCTCGAATGTGGAAAAACCAAAACAAGTTGTGGTGAAAGAACTACAACATATAATGTCAAGTTCCATGTTGAGCCAAACTTCGGGACTCCAGGAGCTTTGGTCATAAGAAACCCAAAGAACAACAGACTCTTCCTCAAACATGCAGCTGTCCAAATTCAGAACAGTCAGATTATCCAGTTCGACTGTTACTCATGGGTATACTCATTCAAAAAGACCAAGAATTTTGATCGGATTTTCTTCTCAAACACTAAATATCTTCCAAGCCAAACACCCCAAGCTCTCATGAAACTGAGAAAGGAAGAACTTGGTAGCTTGAGAGGAAATGGAAGTGGGGAGAGGAAAGAATGGGATCGAATTTACGACTATGACTACTACAATGATCTTGGTGATCCTGATAAAGGTCCAGAACACAAGAGACCTGTCTTGGGTGGGTCTGCATTACTTCCCTATCCTCGCAGAGGAAGAACTGGTCGCCCTTCTAGCAGTGCAGATCCTTTGACTGAGAGCCGGCCATGTACCACTAACCTGGATATATATGTTCCCCCGGATGAGAGGTTCAGCCCCAAGAAAAAATCTGAGTTCATATCCAATTCAATCCAGGCAGCTCTGCATTTCCTCATCCTTGAGGGAAAGGGTTCCAAGCATCTTGAGTCATTTGATGAGATACACGCCATGTTTTCTGCAAACGAGAGCCTAGTGGTTGAGGGGTCGCTCAAAGAGAAACTGAAAGCTGTAGTACCAAACGAGCTTTATAAAGATACTACACATGCAATCAAGAAAACCTTGAAATTTCCACTTCCTCAAATACTAGCAGAAAATGAATTTGCATGGAAGGATGACGAAGAGTTTGGGCGCCAAATGCTTGCAGGAGTTAATCCAGCACGAATACAATCCCTGGAGGTATTTCCACCGCAAAGCAAACATGGAGCTGTGAGCTCAATAAAGTCATCACACATAGAGCACAACCTTGATGGCCTGACTGTTGCCCAGGCAATGAACTACTGGAGGATACTCATCTTGGATCACCATGACTATCTCATGCCCTTCTTGAGCAGAATCAACACAAACGATATTTGTATCTATGCATCCCGCACACTACTTTTTTTGAAGAGTGATTCCACGCTAAGGCCACTAGCAATTGAACTTAGTTTGCCAGGCTCACCTAGCGGTAATGAGATCAATCGGGTACTTGTTCCAGCTAGTCAGGGTGAAGCAGCAGCACTGTGGCACTATGCTAAGGCTCATGTTGCAGTTAATGACTCTGTTTATCATCAACTGGTCAGTCATTGGTTGCATACACATGCAGTGGTCGAGCCGTTCATCATTGCTACTAGAAGACAGCTAAGTTTGATGCATCCAATCCATTGGCTACTAGATCCTCATTTCAAAGACACCATGCACGCGAATGCAGTGGCCCGGAGCAAACTCATTAACTCTGGAGGAATCTTTGAGAAGATATTGTTTTCGGCTGAAATCTCCATGCAGCTATCAGCTGAGCTATACAAAGAGTGGAGATTTGATGAGCAAGCCCTTCCTGCTGATCTACTTAAAAGAGGTATGGCCATACAAGACCCTGATCCAGATAACCCTACTGGGATTCAGCTCCTGTTCCAGGACTATCCCTATGGTGCAGATGGACTTGAGATATGGATAGCCATCCAGGCATGGGTTACAGATTTTTGCATGCTCTTCTATGCTGATGATGCTTCTGTAAGATCTGATGAAGAAGTCCAAGCATGGTGGTCAGAAATTCGAAATGTTGGCCACGGTGATAAGTGCAATGAGACATGGTGGTATCAAATGACATCACGGAAGGACCTAATCCAAGCTTTGACAACTTTGATATGGATTGCATCTGCCCTTCATGCTTCAGTGAACTTTGGGCAATATGCATATAATGGTTATCCTCTAAATCGTACCACACTATGCCGAAGGTTCATTCCACAGGAAGGAACATTTGAGTATGTTGAGTTCTTAAGGGATCCAGACAAATACTATCTCAACATGTTGCCTGAAAGAGATGAGATGATCTTGGGTATAGCACTAGCAGAGGTACTCTCAAAACACACATCTGACGAAGTGTATTTGGGCCAGAGGTTATCATTGTTATCAATAAAGAACGAGGAGATTGGCCAGAAGTTTGAAAAGTTCAACAGAGAACTTCGAAATATAGAGAAAAGAATTGAGGACAAGAATGCCGATGTCAAGCTTAAAAACAGACAAGGCTGTGCCAAGATGCCTTACATGCTTTTGTACCCTGATACCTCCAATGTTGAATCCAAGGGGGGCAGCACGGGGAAGGGGATTCCTAATAGTATAGCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

848

Amino Acids

96.22

Weight (kDa)

7.39

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 61 - 152 2.4e-06 PLAT/LH2 domain
Lipoxygenase PF00305 166 - 825 1.5e-272 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017393)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 969
AccB1I GGYRCC 1 cut(s) 1068
AccB7I CCANNNNNTGG 1 cut(s) 185
AccI GTMKAC 1 cut(s) 414
AccII CGCG 1 cut(s) 1619
AciI CCGC 3 cut(s) 1127, 1306, 1383
AclWI GGATC 9 cut(s) 170, 573, 599, 701, 1245, 1586, 1787, 2192, 2205
AcoI YGGCCR 4 cut(s) 725, 1776, 1978, 2347
AcsI RAATTY 6 cut(s) 369, 436, 570, 1004, 1037, 1965
AcuI CTGAAG 1 cut(s) 2070
AcyI GRCGYC 1 cut(s) 1069
AfaI GTAC 8 cut(s) 55, 166, 733, 954, 1404, 2134, 2271, 2471
AfiI CCNNNNNNNGG 9 cut(s) 185, 296, 614, 641, 674, 1341, 1828, 1882, 2165
AflII CTTAAG 1 cut(s) 2191
AflIII ACRYGT 1 cut(s) 2220
AgsI TTSAA 9 cut(s) 424, 810, 1003, 1324, 1358, 1603, 2360, 2368, 2492
AjnI CCWGG 9 cut(s) 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875
AloI GAACNNNNNNTCC 2 cut(s) 755, 787
Alw21I GWGCWC 2 cut(s) 1154, 1179
Alw26I GTCTC 2 cut(s) 625, 1994
AlwI GGATC 9 cut(s) 170, 573, 599, 701, 1245, 1586, 1787, 2192, 2205
AlwNI CAGNNNCTG 1 cut(s) 1822
Ama87I CYCGRG 1 cut(s) 49
AoxI GGCC 8 cut(s) 725, 1189, 1343, 1629, 1776, 1978, 2305, 2347
ApeKI GCWGC 7 cut(s) 13, 359, 818, 1430, 1433, 1699, 2505
ApoI RAATTY 6 cut(s) 369, 436, 570, 1004, 1037, 1965
ArsI GACNNNNNNTTYG 2 cut(s) 1046, 1078
Asp700I GAANNNNTTC 1 cut(s) 850
AspLEI GCGC 1 cut(s) 1071
AspS9I GGNCC 4 cut(s) 617, 1630, 2032, 2305
AsuC2I CCSGG 2 cut(s) 761, 1633
AsuHPI GGTGA 6 cut(s) 260, 614, 1232, 1368, 1436, 1997
AsuII TTCGAA 2 cut(s) 1969, 2380
AvaI CYCGRG 1 cut(s) 49
AvaII GGWCC 2 cut(s) 617, 2032
BalI TGGCCA 3 cut(s) 1778, 1980, 2349
BamHI GGATCC 1 cut(s) 2197
BanI GGYRCC 1 cut(s) 1068
BanII GRGCYC 1 cut(s) 1154
BbsI GAAGAC 1 cut(s) 1558
Bbv12I GWGCWC 2 cut(s) 1154, 1179
BbvI GCAGC 7 cut(s) 25, 371, 830, 1442, 1445, 1711, 2517
BccI CCATC 3 cut(s) 1181, 1844, 1880
BceAI ACGGC 1 cut(s) 1516
BciT130I CCWGG 9 cut(s) 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877
BciVI GTATCC 1 cut(s) 1218
BcnI CCSGG 2 cut(s) 761, 1633
BcoDI GTCTC 2 cut(s) 625, 1994
BfmI CTRYAG 1 cut(s) 948
BfoI RGCGCY 1 cut(s) 1072
BfrI CTTAAG 1 cut(s) 2191
BfuI GTATCC 1 cut(s) 1218
BglI GCCNNNNNGGC 1 cut(s) 1877
BglII AGATCT 1 cut(s) 1931
BisI GCNGC 7 cut(s) 14, 360, 819, 1431, 1434, 1700, 2506
BlpI GCTNAGC 1 cut(s) 1710
BlsI GCNGC 7 cut(s) 15, 361, 820, 1432, 1435, 1701, 2507
BmcAI AGTACT 1 cut(s) 55
Bme18I GGWCC 2 cut(s) 617, 2032
BmeT110I CYCGRG 1 cut(s) 49
BmgT120I GGNCC 4 cut(s) 617, 1630, 2032, 2305
BmiI GGNNCC 3 cut(s) 853, 1070, 2199
BmrI ACTGGG 1 cut(s) 1818
BmsI GCATC 7 cut(s) 868, 1310, 1557, 1579, 1909, 2078, 2442
BmuI ACTGGG 1 cut(s) 1818
BpiI GAAGAC 1 cut(s) 1558
BplI GAGNNNNNCTC 2 cut(s) 2258, 2290
BpmI CTGGAG 4 cut(s) 288, 1133, 1240, 1674
Bpu10I CCTNAGC 2 cut(s) 1340, 1452
Bpu1102I GCTNAGC 1 cut(s) 1710
Bpu14I TTCGAA 2 cut(s) 1969, 2380
BpuEI CTTGAG 5 cut(s) 550, 860, 884, 1285, 1877
BpuMI CCSGG 2 cut(s) 761, 1633
BsaBI GATNNNNATC 2 cut(s) 1229, 1871
BsaHI GRCGYC 1 cut(s) 1069
BsaI GGTCTC 1 cut(s) 625
BsaJI CCNNGG 6 cut(s) 22, 759, 1110, 1203, 1981, 2496
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 9 cut(s) 185, 296, 614, 641, 674, 1341, 1828, 1882, 2165
Bse118I RCCGGY 1 cut(s) 723
Bse1I ACTGG 6 cut(s) 190, 391, 688, 1223, 1497, 1813
Bse3DI GCAATG 3 cut(s) 1215, 1539, 2002
Bse8I GATNNNNATC 2 cut(s) 1229, 1871
BseBI CCWGG 9 cut(s) 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877
BseDI CCNNGG 6 cut(s) 22, 759, 1110, 1203, 1981, 2496
BseGI GGATG 6 cut(s) 769, 834, 1057, 1301, 1570, 1872
BseJI GATNNNNATC 2 cut(s) 1229, 1871
BseLI CCNNNNNNNGG 9 cut(s) 185, 296, 614, 641, 674, 1341, 1828, 1882, 2165
BseMI GCAATG 3 cut(s) 1215, 1539, 2002
BseMII CTCAG 4 cut(s) 497, 708, 783, 1701
BseNI ACTGG 6 cut(s) 190, 391, 688, 1223, 1497, 1813
BseRI GAGGAG 1 cut(s) 2354
BseXI GCAGC 7 cut(s) 25, 371, 830, 1442, 1445, 1711, 2517
BsgI GTGCAG 2 cut(s) 723, 1866
Bsh1236I CGCG 1 cut(s) 1619
BshFI GGCC 8 cut(s) 727, 1191, 1345, 1631, 1778, 1980, 2307, 2349
BshNI GGYRCC 1 cut(s) 1068
BsiHKAI GWGCWC 2 cut(s) 1154, 1179
BsiHKCI CYCGRG 1 cut(s) 49
BsiSI CCGG 3 cut(s) 724, 761, 1633
BslFI GGGAC 1 cut(s) 313
BslI CCNNNNNNNGG 9 cut(s) 185, 296, 614, 641, 674, 1341, 1828, 1882, 2165
BsmAI GTCTC 2 cut(s) 625, 1994
BsmFI GGGAC 1 cut(s) 313
BsmI GAATGC 2 cut(s) 1627, 2416
BsnI GGCC 8 cut(s) 727, 1191, 1345, 1631, 1778, 1980, 2307, 2349
Bso31I GGTCTC 1 cut(s) 625
BsoBI CYCGRG 1 cut(s) 49
Bsp119I TTCGAA 2 cut(s) 1969, 2380
Bsp1286I GDGCHC 2 cut(s) 1154, 1179
Bsp1407I TGTACA 1 cut(s) 164
Bsp1720I GCTNAGC 1 cut(s) 1710
BspACI CCGC 3 cut(s) 1127, 1306, 1383
BspANI GGCC 8 cut(s) 727, 1191, 1345, 1631, 1778, 1980, 2307, 2349
BspCNI CTCAG 4 cut(s) 498, 709, 784, 1702
BspFNI CGCG 1 cut(s) 1619
BspHI TCATGA 1 cut(s) 498
BspLI GGNNCC 3 cut(s) 853, 1070, 2199
BspPI GGATC 9 cut(s) 170, 573, 599, 701, 1245, 1586, 1787, 2192, 2205
BspQI GCTCTTC 1 cut(s) 1910
BspT104I TTCGAA 2 cut(s) 1969, 2380
BspT107I GGYRCC 1 cut(s) 1068
BspTI CTTAAG 1 cut(s) 2191
BspTNI GGTCTC 1 cut(s) 625
BsrDI GCAATG 3 cut(s) 1215, 1539, 2002
BsrFI RCCGGY 1 cut(s) 723
BsrGI TGTACA 1 cut(s) 164
BsrI ACTGG 6 cut(s) 190, 391, 688, 1223, 1497, 1813
BssAI RCCGGY 1 cut(s) 723
BssECI CCNNGG 6 cut(s) 22, 759, 1110, 1203, 1981, 2496
BssNAI GTATAC 1 cut(s) 415
BssNI GRCGYC 1 cut(s) 1069
BssT1I CCWWGG 1 cut(s) 2496
Bst1107I GTATAC 1 cut(s) 415
Bst2UI CCWGG 9 cut(s) 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877
Bst4CI ACNGT 5 cut(s) 380, 401, 1198, 1440, 1985
Bst6I CTCTTC 4 cut(s) 350, 1053, 1319, 1910
BstACI GRCGYC 1 cut(s) 1069
BstAFI CTTAAG 1 cut(s) 2191
BstAUI TGTACA 1 cut(s) 164
BstBI TTCGAA 2 cut(s) 1969, 2380
BstC8I GCNNGC 7 cut(s) 38, 210, 725, 1080, 1617, 1743, 1901
BstDEI CTNAG 8 cut(s) 506, 717, 792, 1340, 1361, 1452, 1559, 1710
BstDSI CCRYGG 1 cut(s) 1981
BstENI CCTNNNNNAGG 3 cut(s) 612, 672, 1826
BstF5I GGATG 6 cut(s) 769, 834, 1057, 1301, 1570, 1872
BstFNI CGCG 1 cut(s) 1619
BstH2I RGCGCY 1 cut(s) 1072
BstHHI GCGC 1 cut(s) 1071
BstMAI GTCTC 2 cut(s) 625, 1994
BstNI CCWGG 9 cut(s) 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877
BstNSI RCATGY 6 cut(s) 359, 986, 1520, 1903, 2224, 2464
BstSFI CTRYAG 1 cut(s) 948
BstUI CGCG 1 cut(s) 1619
BstV1I GCAGC 7 cut(s) 25, 371, 830, 1442, 1445, 1711, 2517
BstV2I GAAGAC 1 cut(s) 1558
BstX2I RGATCY 4 cut(s) 706, 1591, 1931, 2197
BstXI CCANNNNNNTGG 2 cut(s) 742, 1581
BstYI RGATCY 4 cut(s) 706, 1591, 1931, 2197
BstZ17I GTATAC 1 cut(s) 415
BsuI GTATCC 1 cut(s) 1218
BsuRI GGCC 8 cut(s) 727, 1191, 1345, 1631, 1778, 1980, 2307, 2349
BtgI CCRYGG 1 cut(s) 1981
BtsCI GGATG 6 cut(s) 769, 834, 1057, 1301, 1570, 1872
BtsI GCAGTG 3 cut(s) 706, 1527, 1632
BtsIMutI CAGTG 5 cut(s) 706, 1436, 1527, 1632, 2094
Cac8I GCNNGC 7 cut(s) 38, 210, 725, 1080, 1617, 1743, 1901
CaiI CAGNNNCTG 1 cut(s) 1822
CciI TCATGA 1 cut(s) 498
CfoI GCGC 1 cut(s) 1071
Cfr10I RCCGGY 1 cut(s) 723
Cfr13I GGNCC 4 cut(s) 617, 1630, 2032, 2305
Csp6I GTAC 8 cut(s) 54, 165, 732, 953, 1403, 2133, 2270, 2470
CspCI CAANNNNNGTGG 2 cut(s) 1937, 1972
CviQI GTAC 8 cut(s) 54, 165, 732, 953, 1403, 2133, 2270, 2470
DdeI CTNAG 8 cut(s) 506, 717, 792, 1340, 1361, 1452, 1559, 1710
DinI GGCGCC 1 cut(s) 1070
EaeI YGGCCR 4 cut(s) 725, 1776, 1978, 2347
Eam1104I CTCTTC 4 cut(s) 350, 1053, 1319, 1910
EarI CTCTTC 4 cut(s) 350, 1053, 1319, 1910
Ecl136II GAGCTC 1 cut(s) 1152
Eco130I CCWWGG 1 cut(s) 2496
Eco24I GRGCYC 1 cut(s) 1154
Eco31I GGTCTC 1 cut(s) 625
Eco47I GGWCC 2 cut(s) 617, 2032
Eco53kI GAGCTC 1 cut(s) 1152
Eco57I CTGAAG 1 cut(s) 2070
Eco88I CYCGRG 1 cut(s) 49
EcoICRI GAGCTC 1 cut(s) 1152
EcoNI CCTNNNNNAGG 3 cut(s) 612, 672, 1826
EcoO109I RGGNCCY 1 cut(s) 2032
EcoRII CCWGG 9 cut(s) 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875
EcoT14I CCWWGG 1 cut(s) 2496
EcoT22I ATGCAT 3 cut(s) 1303, 1572, 2110
EcoT38I GRGCYC 1 cut(s) 1154
EgeI GGCGCC 1 cut(s) 1070
EheI GGCGCC 1 cut(s) 1070
ErhI CCWWGG 1 cut(s) 2496
FalI AAGNNNNNCTT 2 cut(s) 983, 1015
FaqI GGGAC 1 cut(s) 313
FauI CCCGC 1 cut(s) 1313
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 7 cut(s) 14, 360, 819, 1431, 1434, 1700, 2506
FokI GGATG 6 cut(s) 776, 821, 1064, 1288, 1557, 1859
FriOI GRGCYC 1 cut(s) 1154
Fsp4HI GCNGC 7 cut(s) 14, 360, 819, 1431, 1434, 1700, 2506
GlaI GCGC 1 cut(s) 1070
GluI GCNGC 7 cut(s) 14, 360, 819, 1431, 1434, 1700, 2506
GsuI CTGGAG 4 cut(s) 288, 1133, 1240, 1674
HaeII RGCGCY 1 cut(s) 1072
HaeIII GGCC 8 cut(s) 727, 1191, 1345, 1631, 1778, 1980, 2307, 2349
HapII CCGG 3 cut(s) 724, 761, 1633
HhaI GCGC 1 cut(s) 1071
Hin1I GRCGYC 1 cut(s) 1069
Hin6I GCGC 1 cut(s) 1069
HinP1I GCGC 1 cut(s) 1069
HindIII AAGCTT 2 cut(s) 2043, 2423
HpaII CCGG 3 cut(s) 724, 761, 1633
HphI GGTGA 6 cut(s) 260, 614, 1232, 1368, 1436, 1997
Hpy166II GTNNAC 2 cut(s) 415, 2092
Hpy188I TCNGA 7 cut(s) 375, 384, 447, 793, 1936, 1963, 2290
Hpy8I GTNNAC 2 cut(s) 415, 2092
HpyAV CCTTC 9 cut(s) 702, 1042, 1270, 1757, 2023, 2087, 2142, 2159, 2509
HpyCH4III ACNGT 5 cut(s) 380, 401, 1198, 1440, 1985
HpyF3I CTNAG 8 cut(s) 506, 717, 792, 1340, 1361, 1452, 1559, 1710
Hsp92I GRCGYC 1 cut(s) 1069
HspAI GCGC 1 cut(s) 1069
KasI GGCGCC 1 cut(s) 1068
KroI GCCGGC 1 cut(s) 723
KroNI GCCGGC 1 cut(s) 725
LguI GCTCTTC 1 cut(s) 1910
LmnI GCTCC 4 cut(s) 308, 1142, 1635, 1824
Lsp1109I GCAGC 7 cut(s) 25, 371, 830, 1442, 1445, 1711, 2517
LweI GCATC 7 cut(s) 868, 1310, 1557, 1579, 1909, 2078, 2442
MaeIII GTNAC 2 cut(s) 401, 1885
MfeI CAATTG 1 cut(s) 1353
MflI RGATCY 4 cut(s) 706, 1591, 1931, 2197
MhlI GDGCHC 2 cut(s) 1154, 1179
MlsI TGGCCA 3 cut(s) 1778, 1980, 2349
MluCI AATT 9 cut(s) 369, 436, 570, 805, 1004, 1037, 1353, 1965, 2397
MluNI TGGCCA 3 cut(s) 1778, 1980, 2349
Mly113I GGCGCC 1 cut(s) 1069
MlyI GAGTC 4 cut(s) 295, 336, 875, 1469
Mox20I TGGCCA 3 cut(s) 1778, 1980, 2349
Mph1103I ATGCAT 3 cut(s) 1303, 1572, 2110
MroNI GCCGGC 1 cut(s) 723
MroXI GAANNNNTTC 1 cut(s) 850
MscI TGGCCA 3 cut(s) 1778, 1980, 2349
MseI TTAA 6 cut(s) 1089, 1470, 1647, 1764, 2192, 2427
MslI CAYNNNNRTG 2 cut(s) 1515, 1620
Msp20I TGGCCA 3 cut(s) 1778, 1980, 2349
MspA1I CMGCKG 2 cut(s) 362, 1709
MspCI CTTAAG 1 cut(s) 2191
MspI CCGG 3 cut(s) 724, 761, 1633
MunI CAATTG 1 cut(s) 1353
Mva1269I GAATGC 2 cut(s) 1627, 2416
MvaI CCWGG 9 cut(s) 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877
MvnI CGCG 1 cut(s) 1619
NaeI GCCGGC 1 cut(s) 725
NarI GGCGCC 1 cut(s) 1069
NciI CCSGG 2 cut(s) 761, 1633
NgoMIV GCCGGC 1 cut(s) 723
NlaIV GGNNCC 3 cut(s) 853, 1070, 2199
NsiI ATGCAT 3 cut(s) 1303, 1572, 2110
NspI RCATGY 6 cut(s) 359, 986, 1520, 1903, 2224, 2464
NspV TTCGAA 2 cut(s) 1969, 2380
PaeI GCATGC 1 cut(s) 1903
PaeR7I CTCGAG 1 cut(s) 49
PagI TCATGA 1 cut(s) 498
PciI ACATGT 1 cut(s) 2220
PciSI GCTCTTC 1 cut(s) 1910
PctI GAATGC 2 cut(s) 1627, 2416
PdiI GCCGGC 1 cut(s) 725
PdmI GAANNNNTTC 1 cut(s) 850
PfeI GAWTC 6 cut(s) 1272, 1331, 1659, 1813, 2492, 2521
PflMI CCANNNNNTGG 1 cut(s) 185
PfoI TCCNGGA 2 cut(s) 304, 1827
PkrI GCNGC 7 cut(s) 15, 361, 820, 1432, 1435, 1701, 2507
PleI GAGTC 4 cut(s) 295, 336, 874, 1469
PluTI GGCGCC 1 cut(s) 1072
PpsI GAGTC 4 cut(s) 295, 336, 874, 1469
PpuMI RGGWCCY 1 cut(s) 2032
PscI ACATGT 1 cut(s) 2220
PsiI TTATAA 1 cut(s) 969
Psp124BI GAGCTC 1 cut(s) 1154
Psp5II RGGWCCY 1 cut(s) 2032
Psp6I CCWGG 9 cut(s) 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875
PspGI CCWGG 9 cut(s) 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875
PspN4I GGNNCC 3 cut(s) 853, 1070, 2199
PspPI GGNCC 4 cut(s) 617, 1630, 2032, 2305
PspPPI RGGWCCY 1 cut(s) 2032
PspXI VCTCGAGB 1 cut(s) 49
PsrI GAACNNNNNNTAC 2 cut(s) 2171, 2203
PstNI CAGNNNCTG 1 cut(s) 1822
PsuI RGATCY 4 cut(s) 706, 1591, 1931, 2197
PvuII CAGCTG 2 cut(s) 362, 1709
RsaI GTAC 8 cut(s) 55, 166, 733, 954, 1404, 2134, 2271, 2471
RsaNI GTAC 8 cut(s) 54, 165, 732, 953, 1403, 2133, 2270, 2470
RseI CAYNNNNRTG 2 cut(s) 1515, 1620
SacI GAGCTC 1 cut(s) 1154
SapI GCTCTTC 1 cut(s) 1910
SaqAI TTAA 6 cut(s) 1089, 1470, 1647, 1764, 2192, 2427
SatI GCNGC 7 cut(s) 14, 360, 819, 1431, 1434, 1700, 2506
Sau96I GGNCC 4 cut(s) 617, 1630, 2032, 2305
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 4 cut(s) 295, 336, 875, 1469
SduI GDGCHC 2 cut(s) 1154, 1179
SfaNI GCATC 7 cut(s) 868, 1310, 1557, 1579, 1909, 2078, 2442
SfcI CTRYAG 1 cut(s) 948
SfoI GGCGCC 1 cut(s) 1070
Sfr274I CTCGAG 1 cut(s) 49
SfuI TTCGAA 2 cut(s) 1969, 2380
SinI GGWCC 2 cut(s) 617, 2032
SlaI CTCGAG 1 cut(s) 49
SmiMI CAYNNNNRTG 2 cut(s) 1515, 1620
SmlI CTYRAG 7 cut(s) 49, 529, 839, 863, 1264, 1856, 2191
SmoI CTYRAG 7 cut(s) 49, 529, 839, 863, 1264, 1856, 2191
SphI GCATGC 1 cut(s) 1903
Sse9I AATT 9 cut(s) 369, 436, 570, 805, 1004, 1037, 1353, 1965, 2397
SsiI CCGC 3 cut(s) 1127, 1306, 1383
SspDI GGCGCC 1 cut(s) 1068
SstI GAGCTC 1 cut(s) 1154
StyI CCWWGG 1 cut(s) 2496
TaaI ACNGT 5 cut(s) 380, 401, 1198, 1440, 1985
TaqI TCGA 9 cut(s) 28, 50, 174, 219, 396, 568, 1527, 1969, 2380
TasI AATT 9 cut(s) 369, 436, 570, 805, 1004, 1037, 1353, 1965, 2397
TatI WGTACW 2 cut(s) 53, 164
TfiI GAWTC 6 cut(s) 1272, 1331, 1659, 1813, 2492, 2521
Tru1I TTAA 6 cut(s) 1089, 1470, 1647, 1764, 2192, 2427
Tru9I TTAA 6 cut(s) 1089, 1470, 1647, 1764, 2192, 2427
TscAI CASTG 5 cut(s) 706, 1443, 1527, 1632, 2094
TseI GCWGC 7 cut(s) 13, 359, 818, 1430, 1433, 1699, 2505
TspDTI ATGAA 8 cut(s) 515, 787, 1050, 1226, 1525, 1953, 2069, 2143
TspGWI ACGGA 1 cut(s) 2041
TspRI CASTG 5 cut(s) 706, 1443, 1527, 1632, 2094
Van91I CCANNNNNTGG 1 cut(s) 185
Vha464I CTTAAG 1 cut(s) 2191
VpaK11BI GGWCC 2 cut(s) 617, 2032
XagI CCTNNNNNAGG 3 cut(s) 612, 672, 1826
XapI RAATTY 6 cut(s) 369, 436, 570, 1004, 1037, 1965
XceI RCATGY 6 cut(s) 359, 986, 1520, 1903, 2224, 2464
XhoI CTCGAG 1 cut(s) 49
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 850
ZrmI AGTACT 1 cut(s) 55
Zsp2I ATGCAT 3 cut(s) 1303, 1572, 2110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.