Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1156900.v1.1 |
| prunus_persica | Prupe.8G189000_v2.0.a1 Prupe.8G189000_v2.0.a1 |
| pyrus_communis | pycom05g14950 |
| rosa_chinensis | RchiOBHm_Chr6g0282631 |
| rosa_laevigata | RLG00000012879 |
| rosa_rugosa | Rorug06G0148000 Rorug06G0148100 |
| rosa_samantha | Rh6AG261400 Rh6BG264500 Rh6CG263700 Rh6DG255900 |
| rosa_wichuraiana | Rw6G022600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 969 |
| Acc65I | GGTACC | 1 cut(s) | 952 |
| AccB1I | GGYRCC | 2 cut(s) | 952, 1068 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 185 |
| AccI | GTMKAC | 1 cut(s) | 414 |
| AccII | CGCG | 1 cut(s) | 1619 |
| AciI | CCGC | 2 cut(s) | 1306, 1993 |
| AcoI | YGGCCR | 2 cut(s) | 725, 1978 |
| AcsI | RAATTY | 6 cut(s) | 369, 436, 570, 1004, 1037, 1965 |
| AcuI | CTGAAG | 1 cut(s) | 2070 |
| AcyI | GRCGYC | 1 cut(s) | 1069 |
| AfaI | GTAC | 8 cut(s) | 55, 166, 733, 954, 1404, 2134, 2271, 2471 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 185, 296, 614, 641, 674, 1341, 1882, 2165 |
| AflIII | ACRYGT | 1 cut(s) | 2220 |
| AgsI | TTSAA | 9 cut(s) | 424, 810, 1003, 1324, 1358, 1603, 2360, 2368, 2492 |
| AjnI | CCWGG | 9 cut(s) | 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 755, 787 |
| Alw21I | GWGCWC | 2 cut(s) | 313, 1154 |
| Alw26I | GTCTC | 2 cut(s) | 625, 1994 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1822 |
| Ama87I | CYCGRG | 1 cut(s) | 49 |
| AoxI | GGCC | 6 cut(s) | 725, 1189, 1343, 1776, 1978, 2305 |
| ApeKI | GCWGC | 7 cut(s) | 13, 359, 818, 1430, 1433, 1699, 2505 |
| ApoI | RAATTY | 6 cut(s) | 369, 436, 570, 1004, 1037, 1965 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1046, 1078 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 850 |
| Asp718I | GGTACC | 1 cut(s) | 952 |
| AspLEI | GCGC | 1 cut(s) | 1071 |
| AspS9I | GGNCC | 4 cut(s) | 617, 1777, 2032, 2305 |
| AsuC2I | CCSGG | 1 cut(s) | 761 |
| AsuHPI | GGTGA | 7 cut(s) | 260, 560, 614, 1232, 1368, 1436, 1997 |
| AsuII | TTCGAA | 2 cut(s) | 1969, 2380 |
| AvaI | CYCGRG | 1 cut(s) | 49 |
| AvaII | GGWCC | 2 cut(s) | 617, 2032 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1276, 1309 |
| BalI | TGGCCA | 1 cut(s) | 1980 |
| BamHI | GGATCC | 1 cut(s) | 2197 |
| BanI | GGYRCC | 2 cut(s) | 952, 1068 |
| BanII | GRGCYC | 2 cut(s) | 313, 1154 |
| BbsI | GAAGAC | 1 cut(s) | 1558 |
| Bbv12I | GWGCWC | 2 cut(s) | 313, 1154 |
| BbvI | GCAGC | 7 cut(s) | 25, 371, 830, 1442, 1445, 1711, 2517 |
| BccI | CCATC | 3 cut(s) | 1181, 1844, 1880 |
| BceAI | ACGGC | 1 cut(s) | 1516 |
| BciT130I | CCWGG | 9 cut(s) | 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877 |
| BciVI | GTATCC | 1 cut(s) | 1218 |
| BcnI | CCSGG | 1 cut(s) | 761 |
| BcoDI | GTCTC | 2 cut(s) | 625, 1994 |
| BfoI | RGCGCY | 1 cut(s) | 1072 |
| BfuI | GTATCC | 1 cut(s) | 1218 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1877 |
| BglII | AGATCT | 1 cut(s) | 1931 |
| BisI | GCNGC | 7 cut(s) | 14, 360, 819, 1431, 1434, 1700, 2506 |
| BlpI | GCTNAGC | 1 cut(s) | 1710 |
| BlsI | GCNGC | 7 cut(s) | 15, 361, 820, 1432, 1435, 1701, 2507 |
| BmcAI | AGTACT | 1 cut(s) | 55 |
| Bme18I | GGWCC | 2 cut(s) | 617, 2032 |
| BmeT110I | CYCGRG | 1 cut(s) | 49 |
| BmgT120I | GGNCC | 4 cut(s) | 617, 1777, 2032, 2305 |
| BmiI | GGNNCC | 4 cut(s) | 853, 954, 1070, 2199 |
| BmrI | ACTGGG | 1 cut(s) | 1818 |
| BmsI | GCATC | 8 cut(s) | 662, 1310, 1557, 1579, 1909, 2078, 2407, 2442 |
| BmuI | ACTGGG | 1 cut(s) | 1818 |
| BpiI | GAAGAC | 1 cut(s) | 1558 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2258, 2290 |
| BpmI | CTGGAG | 4 cut(s) | 288, 1133, 1240, 1674 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1340, 1452 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1710 |
| Bpu14I | TTCGAA | 2 cut(s) | 1969, 2380 |
| BpuEI | CTTGAG | 5 cut(s) | 550, 860, 884, 1285, 1877 |
| BpuMI | CCSGG | 1 cut(s) | 761 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1229 |
| BsaHI | GRCGYC | 1 cut(s) | 1069 |
| BsaI | GGTCTC | 1 cut(s) | 625 |
| BsaJI | CCNNGG | 6 cut(s) | 22, 759, 1110, 1203, 1981, 2496 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 300, 330 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 185, 296, 614, 641, 674, 1341, 1882, 2165 |
| Bse118I | RCCGGY | 1 cut(s) | 723 |
| Bse1I | ACTGG | 7 cut(s) | 190, 391, 688, 1223, 1497, 1632, 1813 |
| Bse3DI | GCAATG | 2 cut(s) | 706, 1539 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1229 |
| BseBI | CCWGG | 9 cut(s) | 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877 |
| BseDI | CCNNGG | 6 cut(s) | 22, 759, 1110, 1203, 1981, 2496 |
| BseGI | GGATG | 6 cut(s) | 387, 769, 1057, 1301, 1570, 1872 |
| BseJI | GATNNNNATC | 1 cut(s) | 1229 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 185, 296, 614, 641, 674, 1341, 1882, 2165 |
| BseMI | GCAATG | 2 cut(s) | 706, 1539 |
| BseMII | CTCAG | 5 cut(s) | 497, 708, 783, 1701, 2175 |
| BseNI | ACTGG | 7 cut(s) | 190, 391, 688, 1223, 1497, 1632, 1813 |
| BseXI | GCAGC | 7 cut(s) | 25, 371, 830, 1442, 1445, 1711, 2517 |
| BsgI | GTGCAG | 1 cut(s) | 1866 |
| Bsh1236I | CGCG | 1 cut(s) | 1619 |
| BshFI | GGCC | 6 cut(s) | 727, 1191, 1345, 1778, 1980, 2307 |
| BshNI | GGYRCC | 2 cut(s) | 952, 1068 |
| BsiHKAI | GWGCWC | 2 cut(s) | 313, 1154 |
| BsiHKCI | CYCGRG | 1 cut(s) | 49 |
| BsiSI | CCGG | 2 cut(s) | 724, 761 |
| BslFI | GGGAC | 1 cut(s) | 313 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 185, 296, 614, 641, 674, 1341, 1882, 2165 |
| BsmAI | GTCTC | 2 cut(s) | 625, 1994 |
| BsmFI | GGGAC | 1 cut(s) | 313 |
| BsmI | GAATGC | 2 cut(s) | 1627, 2416 |
| BsnI | GGCC | 6 cut(s) | 727, 1191, 1345, 1778, 1980, 2307 |
| Bso31I | GGTCTC | 1 cut(s) | 625 |
| BsoBI | CYCGRG | 1 cut(s) | 49 |
| Bsp119I | TTCGAA | 2 cut(s) | 1969, 2380 |
| Bsp1286I | GDGCHC | 2 cut(s) | 313, 1154 |
| Bsp1407I | TGTACA | 1 cut(s) | 164 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1710 |
| BspACI | CCGC | 2 cut(s) | 1306, 1993 |
| BspANI | GGCC | 6 cut(s) | 727, 1191, 1345, 1778, 1980, 2307 |
| BspCNI | CTCAG | 5 cut(s) | 498, 709, 784, 1702, 2176 |
| BspFNI | CGCG | 1 cut(s) | 1619 |
| BspHI | TCATGA | 1 cut(s) | 498 |
| BspLI | GGNNCC | 4 cut(s) | 853, 954, 1070, 2199 |
| BspQI | GCTCTTC | 1 cut(s) | 1910 |
| BspT104I | TTCGAA | 2 cut(s) | 1969, 2380 |
| BspT107I | GGYRCC | 2 cut(s) | 952, 1068 |
| BspTNI | GGTCTC | 1 cut(s) | 625 |
| BsrDI | GCAATG | 2 cut(s) | 706, 1539 |
| BsrFI | RCCGGY | 1 cut(s) | 723 |
| BsrGI | TGTACA | 1 cut(s) | 164 |
| BsrI | ACTGG | 7 cut(s) | 190, 391, 688, 1223, 1497, 1632, 1813 |
| BssAI | RCCGGY | 1 cut(s) | 723 |
| BssECI | CCNNGG | 6 cut(s) | 22, 759, 1110, 1203, 1981, 2496 |
| BssNAI | GTATAC | 1 cut(s) | 415 |
| BssNI | GRCGYC | 1 cut(s) | 1069 |
| BssT1I | CCWWGG | 1 cut(s) | 2496 |
| Bst1107I | GTATAC | 1 cut(s) | 415 |
| Bst2UI | CCWGG | 9 cut(s) | 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877 |
| Bst4CI | ACNGT | 5 cut(s) | 380, 401, 1198, 1440, 1985 |
| Bst6I | CTCTTC | 4 cut(s) | 1053, 1319, 1910, 2334 |
| BstACI | GRCGYC | 1 cut(s) | 1069 |
| BstAUI | TGTACA | 1 cut(s) | 164 |
| BstBI | TTCGAA | 2 cut(s) | 1969, 2380 |
| BstC8I | GCNNGC | 7 cut(s) | 38, 210, 725, 1080, 1617, 1743, 1901 |
| BstDSI | CCRYGG | 1 cut(s) | 1981 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 612, 672 |
| BstF5I | GGATG | 6 cut(s) | 387, 769, 1057, 1301, 1570, 1872 |
| BstFNI | CGCG | 1 cut(s) | 1619 |
| BstH2I | RGCGCY | 1 cut(s) | 1072 |
| BstHHI | GCGC | 1 cut(s) | 1071 |
| BstMAI | GTCTC | 2 cut(s) | 625, 1994 |
| BstNI | CCWGG | 9 cut(s) | 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877 |
| BstNSI | RCATGY | 6 cut(s) | 887, 986, 1520, 1903, 2224, 2464 |
| BstUI | CGCG | 1 cut(s) | 1619 |
| BstV1I | GCAGC | 7 cut(s) | 25, 371, 830, 1442, 1445, 1711, 2517 |
| BstV2I | GAAGAC | 1 cut(s) | 1558 |
| BstX2I | RGATCY | 4 cut(s) | 706, 1591, 1931, 2197 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 742, 1581 |
| BstYI | RGATCY | 4 cut(s) | 706, 1591, 1931, 2197 |
| BstZ17I | GTATAC | 1 cut(s) | 415 |
| BsuI | GTATCC | 1 cut(s) | 1218 |
| BsuRI | GGCC | 6 cut(s) | 727, 1191, 1345, 1778, 1980, 2307 |
| BtgI | CCRYGG | 1 cut(s) | 1981 |
| BtgZI | GCGATG | 1 cut(s) | 1223 |
| BtsCI | GGATG | 6 cut(s) | 387, 769, 1057, 1301, 1570, 1872 |
| BtsI | GCAGTG | 1 cut(s) | 1527 |
| BtsIMutI | CAGTG | 5 cut(s) | 1216, 1436, 1527, 1625, 2094 |
| Cac8I | GCNNGC | 7 cut(s) | 38, 210, 725, 1080, 1617, 1743, 1901 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1822 |
| CciI | TCATGA | 1 cut(s) | 498 |
| CfoI | GCGC | 1 cut(s) | 1071 |
| Cfr10I | RCCGGY | 1 cut(s) | 723 |
| Cfr13I | GGNCC | 4 cut(s) | 617, 1777, 2032, 2305 |
| Csp6I | GTAC | 8 cut(s) | 54, 165, 732, 953, 1403, 2133, 2270, 2470 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1937, 1972 |
| CviQI | GTAC | 8 cut(s) | 54, 165, 732, 953, 1403, 2133, 2270, 2470 |
| DinI | GGCGCC | 1 cut(s) | 1070 |
| EaeI | YGGCCR | 2 cut(s) | 725, 1978 |
| Eam1104I | CTCTTC | 4 cut(s) | 1053, 1319, 1910, 2334 |
| EarI | CTCTTC | 4 cut(s) | 1053, 1319, 1910, 2334 |
| Ecl136II | GAGCTC | 2 cut(s) | 311, 1152 |
| Eco130I | CCWWGG | 1 cut(s) | 2496 |
| Eco24I | GRGCYC | 2 cut(s) | 313, 1154 |
| Eco31I | GGTCTC | 1 cut(s) | 625 |
| Eco47I | GGWCC | 2 cut(s) | 617, 2032 |
| Eco53kI | GAGCTC | 2 cut(s) | 311, 1152 |
| Eco57I | CTGAAG | 1 cut(s) | 2070 |
| Eco88I | CYCGRG | 1 cut(s) | 49 |
| EcoICRI | GAGCTC | 2 cut(s) | 311, 1152 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 612, 672 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2032 |
| EcoRII | CCWGG | 9 cut(s) | 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875 |
| EcoT14I | CCWWGG | 1 cut(s) | 2496 |
| EcoT22I | ATGCAT | 3 cut(s) | 1303, 1572, 2110 |
| EcoT38I | GRGCYC | 2 cut(s) | 313, 1154 |
| EgeI | GGCGCC | 1 cut(s) | 1070 |
| EheI | GGCGCC | 1 cut(s) | 1070 |
| ErhI | CCWWGG | 1 cut(s) | 2496 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 983, 1015, 2231, 2263 |
| FaqI | GGGAC | 1 cut(s) | 313 |
| FauI | CCCGC | 1 cut(s) | 1313 |
| FauNDI | CATATG | 1 cut(s) | 265 |
| FblI | GTMKAC | 1 cut(s) | 414 |
| Fnu4HI | GCNGC | 7 cut(s) | 14, 360, 819, 1431, 1434, 1700, 2506 |
| FokI | GGATG | 6 cut(s) | 374, 776, 1064, 1288, 1557, 1859 |
| FriOI | GRGCYC | 2 cut(s) | 313, 1154 |
| Fsp4HI | GCNGC | 7 cut(s) | 14, 360, 819, 1431, 1434, 1700, 2506 |
| GlaI | GCGC | 1 cut(s) | 1070 |
| GluI | GCNGC | 7 cut(s) | 14, 360, 819, 1431, 1434, 1700, 2506 |
| GsuI | CTGGAG | 4 cut(s) | 288, 1133, 1240, 1674 |
| HaeII | RGCGCY | 1 cut(s) | 1072 |
| HaeIII | GGCC | 6 cut(s) | 727, 1191, 1345, 1778, 1980, 2307 |
| HapII | CCGG | 2 cut(s) | 724, 761 |
| HhaI | GCGC | 1 cut(s) | 1071 |
| Hin1I | GRCGYC | 1 cut(s) | 1069 |
| Hin6I | GCGC | 1 cut(s) | 1069 |
| HinP1I | GCGC | 1 cut(s) | 1069 |
| HindIII | AAGCTT | 2 cut(s) | 2043, 2423 |
| HpaII | CCGG | 2 cut(s) | 724, 761 |
| HphI | GGTGA | 7 cut(s) | 260, 560, 614, 1232, 1368, 1436, 1997 |
| Hpy166II | GTNNAC | 2 cut(s) | 415, 2092 |
| Hpy188I | TCNGA | 8 cut(s) | 153, 375, 384, 793, 1635, 1936, 1963, 2290 |
| Hpy8I | GTNNAC | 2 cut(s) | 415, 2092 |
| Hpy99I | CGWCG | 1 cut(s) | 1289 |
| HpyAV | CCTTC | 9 cut(s) | 702, 1042, 1270, 1757, 2023, 2087, 2142, 2159, 2509 |
| HpyCH4III | ACNGT | 5 cut(s) | 380, 401, 1198, 1440, 1985 |
| HpyCH4IV | ACGT | 2 cut(s) | 223, 1287 |
| HpySE526I | ACGT | 2 cut(s) | 223, 1287 |
| Hsp92I | GRCGYC | 1 cut(s) | 1069 |
| HspAI | GCGC | 1 cut(s) | 1069 |
| KasI | GGCGCC | 1 cut(s) | 1068 |
| KpnI | GGTACC | 1 cut(s) | 956 |
| KroI | GCCGGC | 1 cut(s) | 723 |
| KroNI | GCCGGC | 1 cut(s) | 725 |
| LguI | GCTCTTC | 1 cut(s) | 1910 |
| LmnI | GCTCC | 3 cut(s) | 308, 1142, 1635 |
| Lsp1109I | GCAGC | 7 cut(s) | 25, 371, 830, 1442, 1445, 1711, 2517 |
| LweI | GCATC | 8 cut(s) | 662, 1310, 1557, 1579, 1909, 2078, 2407, 2442 |
| MaeII | ACGT | 2 cut(s) | 223, 1287 |
| MaeIII | GTNAC | 2 cut(s) | 401, 1885 |
| MfeI | CAATTG | 1 cut(s) | 1353 |
| MflI | RGATCY | 4 cut(s) | 706, 1591, 1931, 2197 |
| MhlI | GDGCHC | 2 cut(s) | 313, 1154 |
| MlsI | TGGCCA | 1 cut(s) | 1980 |
| MluCI | AATT | 9 cut(s) | 369, 436, 570, 805, 1004, 1037, 1353, 1965, 2397 |
| MluNI | TGGCCA | 1 cut(s) | 1980 |
| Mly113I | GGCGCC | 1 cut(s) | 1069 |
| MlyI | GAGTC | 3 cut(s) | 295, 875, 1469 |
| Mox20I | TGGCCA | 1 cut(s) | 1980 |
| Mph1103I | ATGCAT | 3 cut(s) | 1303, 1572, 2110 |
| MroNI | GCCGGC | 1 cut(s) | 723 |
| MroXI | GAANNNNTTC | 1 cut(s) | 850 |
| MscI | TGGCCA | 1 cut(s) | 1980 |
| MseI | TTAA | 5 cut(s) | 1089, 1470, 1647, 1764, 2427 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1515, 1620 |
| Msp20I | TGGCCA | 1 cut(s) | 1980 |
| MspA1I | CMGCKG | 2 cut(s) | 362, 1709 |
| MspI | CCGG | 2 cut(s) | 724, 761 |
| MunI | CAATTG | 1 cut(s) | 1353 |
| Mva1269I | GAATGC | 2 cut(s) | 1627, 2416 |
| MvaI | CCWGG | 9 cut(s) | 23, 306, 743, 815, 1112, 1205, 1371, 1829, 1877 |
| MvnI | CGCG | 1 cut(s) | 1619 |
| NaeI | GCCGGC | 1 cut(s) | 725 |
| NarI | GGCGCC | 1 cut(s) | 1069 |
| NciI | CCSGG | 1 cut(s) | 761 |
| NdeI | CATATG | 1 cut(s) | 265 |
| NgoMIV | GCCGGC | 1 cut(s) | 723 |
| NlaIV | GGNNCC | 4 cut(s) | 853, 954, 1070, 2199 |
| NsiI | ATGCAT | 3 cut(s) | 1303, 1572, 2110 |
| NspI | RCATGY | 6 cut(s) | 887, 986, 1520, 1903, 2224, 2464 |
| NspV | TTCGAA | 2 cut(s) | 1969, 2380 |
| PaeI | GCATGC | 1 cut(s) | 1903 |
| PaeR7I | CTCGAG | 1 cut(s) | 49 |
| PagI | TCATGA | 1 cut(s) | 498 |
| PciI | ACATGT | 1 cut(s) | 2220 |
| PciSI | GCTCTTC | 1 cut(s) | 1910 |
| PctI | GAATGC | 2 cut(s) | 1627, 2416 |
| PdiI | GCCGGC | 1 cut(s) | 725 |
| PdmI | GAANNNNTTC | 1 cut(s) | 850 |
| PfeI | GAWTC | 7 cut(s) | 342, 1272, 1331, 1659, 1813, 2492, 2521 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 185 |
| PfoI | TCCNGGA | 2 cut(s) | 304, 1827 |
| PkrI | GCNGC | 7 cut(s) | 15, 361, 820, 1432, 1435, 1701, 2507 |
| PleI | GAGTC | 3 cut(s) | 295, 874, 1469 |
| PluTI | GGCGCC | 1 cut(s) | 1072 |
| PpsI | GAGTC | 3 cut(s) | 295, 874, 1469 |
| PpuMI | RGGWCCY | 1 cut(s) | 2032 |
| PscI | ACATGT | 1 cut(s) | 2220 |
| PsiI | TTATAA | 1 cut(s) | 969 |
| Psp124BI | GAGCTC | 2 cut(s) | 313, 1154 |
| Psp5II | RGGWCCY | 1 cut(s) | 2032 |
| Psp6I | CCWGG | 9 cut(s) | 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875 |
| PspGI | CCWGG | 9 cut(s) | 21, 304, 741, 813, 1110, 1203, 1369, 1827, 1875 |
| PspN4I | GGNNCC | 4 cut(s) | 853, 954, 1070, 2199 |
| PspPI | GGNCC | 4 cut(s) | 617, 1777, 2032, 2305 |
| PspPPI | RGGWCCY | 1 cut(s) | 2032 |
| PspXI | VCTCGAGB | 1 cut(s) | 49 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2171, 2203 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1822 |
| PsuI | RGATCY | 4 cut(s) | 706, 1591, 1931, 2197 |
| PvuII | CAGCTG | 2 cut(s) | 362, 1709 |
| RsaI | GTAC | 8 cut(s) | 55, 166, 733, 954, 1404, 2134, 2271, 2471 |
| RsaNI | GTAC | 8 cut(s) | 54, 165, 732, 953, 1403, 2133, 2270, 2470 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1515, 1620 |
| SacI | GAGCTC | 2 cut(s) | 313, 1154 |
| SapI | GCTCTTC | 1 cut(s) | 1910 |
| SaqAI | TTAA | 5 cut(s) | 1089, 1470, 1647, 1764, 2427 |
| SatI | GCNGC | 7 cut(s) | 14, 360, 819, 1431, 1434, 1700, 2506 |
| Sau96I | GGNCC | 4 cut(s) | 617, 1777, 2032, 2305 |
| ScaI | AGTACT | 1 cut(s) | 55 |
| SchI | GAGTC | 3 cut(s) | 295, 875, 1469 |
| SduI | GDGCHC | 2 cut(s) | 313, 1154 |
| SfaNI | GCATC | 8 cut(s) | 662, 1310, 1557, 1579, 1909, 2078, 2407, 2442 |
| SfoI | GGCGCC | 1 cut(s) | 1070 |
| Sfr274I | CTCGAG | 1 cut(s) | 49 |
| SfuI | TTCGAA | 2 cut(s) | 1969, 2380 |
| SinI | GGWCC | 2 cut(s) | 617, 2032 |
| SlaI | CTCGAG | 1 cut(s) | 49 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1515, 1620 |
| SmlI | CTYRAG | 6 cut(s) | 49, 529, 839, 863, 1264, 1856 |
| SmoI | CTYRAG | 6 cut(s) | 49, 529, 839, 863, 1264, 1856 |
| SphI | GCATGC | 1 cut(s) | 1903 |
| Sse9I | AATT | 9 cut(s) | 369, 436, 570, 805, 1004, 1037, 1353, 1965, 2397 |
| SsiI | CCGC | 2 cut(s) | 1306, 1993 |
| SspDI | GGCGCC | 1 cut(s) | 1068 |
| SstI | GAGCTC | 2 cut(s) | 313, 1154 |
| StyI | CCWWGG | 1 cut(s) | 2496 |
| TaaI | ACNGT | 5 cut(s) | 380, 401, 1198, 1440, 1985 |
| TaiI | ACGT | 2 cut(s) | 226, 1290 |
| TaqI | TCGA | 9 cut(s) | 28, 50, 174, 285, 396, 568, 1527, 1969, 2380 |
| TasI | AATT | 9 cut(s) | 369, 436, 570, 805, 1004, 1037, 1353, 1965, 2397 |
| TatI | WGTACW | 2 cut(s) | 53, 164 |
| TfiI | GAWTC | 7 cut(s) | 342, 1272, 1331, 1659, 1813, 2492, 2521 |
| Tru1I | TTAA | 5 cut(s) | 1089, 1470, 1647, 1764, 2427 |
| Tru9I | TTAA | 5 cut(s) | 1089, 1470, 1647, 1764, 2427 |
| TscAI | CASTG | 5 cut(s) | 1223, 1443, 1527, 1632, 2094 |
| TseI | GCWGC | 7 cut(s) | 13, 359, 818, 1430, 1433, 1699, 2505 |
| TspGWI | ACGGA | 1 cut(s) | 2041 |
| TspRI | CASTG | 5 cut(s) | 1223, 1443, 1527, 1632, 2094 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 185 |
| VpaK11BI | GGWCC | 2 cut(s) | 617, 2032 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 612, 672 |
| XapI | RAATTY | 6 cut(s) | 369, 436, 570, 1004, 1037, 1965 |
| XceI | RCATGY | 6 cut(s) | 887, 986, 1520, 1903, 2224, 2464 |
| XhoI | CTCGAG | 1 cut(s) | 49 |
| XmiI | GTMKAC | 1 cut(s) | 414 |
| XmnI | GAANNNNTTC | 1 cut(s) | 850 |
| ZrmI | AGTACT | 1 cut(s) | 55 |
| Zsp2I | ATGCAT | 3 cut(s) | 1303, 1572, 2110 |