Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0015540

Physical Location & Seq

Genomic Coordinates Forward (+)

30901359 .. 30902594

Gene Structure 1236 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013393

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGAGGAGGGACGAACTCCACATCAACGTGCCCAACCCCTTCCGCTGCCCCATCTCCATGGACGTCATGAGGTCTCCCGTCAGCCTCTCCACCGGCGTCACCTACGACCGTTCGAGCATCCAGCACTGGCTCGACGCCGGCCACGACACCTGTCCCGCCACCATGCAGATCCTCCAGTCCAAAGACTTCGTCCCCAACCTCAATCTCCGCCGTCTGATCAATCTCTGGGCCCAATCCCACGGCCCCATCTCCCCCGCCTCCTCTCCTACCCTCTCCGACCAACAGCTCCGCGGCCTCGTGCAATATCTCGCGAACGAGAACGAGAAATTCAACCAGAATCTCTTCAATTCGCTGTCCAAGATGGTCGATTTCGCCAAGTCAAAGGACGAGAATCGCAGATTTCTGGCGAATTTCAACGGCTTCGTTCCGGCCGTCGTCGGCGTTTTGAACAGGGAAGGGGTCGAAATTGAGGTTCTGGAAATGGTAATGAGGCTTTTGGATTTGATTTCGTCTCAAAACGGCGTCGTCGAGCAATTGCACCAATTGATCACCAAGAGCAACCGGAATTGCCTCTCTTCGATTCAATTGGTGTTGCAGAGTGGCAGTCTGAGCTCGAAGATCGAATCCGCCAGGGTTTTGGGTTCAATCGCACTCGACGCCGACTCGAAACGATTAATCGCCGAGAAAGAGGGACTGTTGACCGTACTGAACGACCTGTTGACCTCAGAAACCGACCGGAGCTTGCACGACGTCGTTTTCTCGTGCTTGGTCTCGTTGTCGGTGACCCGGTCAGTCAAATCCGAACTCGTCCGGTTCGGACTCGTCCAATTCATAACGGAAACCCTCTCGAACCCTGACGTCAGCGCTTCCCTGGCGGAGAAGGCGATGAAGCTGTTGTCCAAGATTGCCACGTGCGCGGAGGGCAGGTCCGAGATAAGCGGGGAGCCGAAATGCGTGGCGGCGGTGGCGGAGAGGCTGATGAAGGGGTCGATGGCGGCGACGGAGGACGGCGTGGCGGTTTTGTGGAGCGTGTGTTGCATGGTGGGGGATAAGAGGGCTAGGGAGTGTGTAGGGAGGAGCAATGGGTTGGCTAAGATATTGCTAGTGATGCAAAGTGGGTATTGTGAAGGGCATTTCATGAGGAGGATGTGTGGGGATTTGATGAAGGTTTTGAGTGTTGGGTTGGGGATGGGGTTGAGCTATGACACCATGACCAAACATATCATGCCTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005911 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030054 GO:0032446 GO:0033612 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0055044 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

U-box

Protein Analysis

412

Amino Acids

45.18

Weight (kDa)

7.53

Isoelectric Point (pI)

50.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	10 - 80	1e-17	U-box domain
ARM_PUB	PF25598	110 - 395	3.8e-54	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g14260
malus_domestica	MD05G1020500.v1.1 MD10G1021400.v1.1
prunus_persica	Prupe.8G024500_v2.0.a1
pyrus_communis	pycom05g01190 pycom10g01460
rosa_chinensis	RchiOBHm_Chr6g0276541
rosa_laevigata	RLG00000013393
rosa_multiflora	Rmu_ssc0000059.1_g000027
rosa_roxburghii	Rroxscaffold_7G00192190
rosa_rugosa	Rorug06G0101700
rosa_samantha	Rh6AG212300 Rh6BG217300 Rh6CG219300 Rh6DG209200
rosa_wichuraiana	Rw6G018550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	66, 753, 861
Acc36I	ACCTGC	1 cut(s)	915
AccII	CGCG	3 cut(s)	291, 311, 917
AclWI	GGATC	1 cut(s)	163
AcoI	YGGCCR	2 cut(s)	139, 429
AcsI	RAATTY	2 cut(s)	326, 409
AcvI	CACGTG	1 cut(s)	912
AcyI	GRCGYC	7 cut(s)	63, 96, 135, 522, 657, 750, 858
AfaI	GTAC	1 cut(s)	705
AfeI	AGCGCT	1 cut(s)	865
AgsI	TTSAA	6 cut(s)	331, 346, 415, 448, 584, 645
AjnI	CCWGG	2 cut(s)	629, 870
AluBI	AGCT	5 cut(s)	286, 612, 741, 892, 1200
AluI	AGCT	5 cut(s)	286, 612, 741, 892, 1200
Alw21I	GWGCWC	1 cut(s)	614
Alw26I	GTCTC	3 cut(s)	78, 516, 775
AlwI	GGATC	1 cut(s)	163
Aor51HI	AGCGCT	1 cut(s)	865
AoxI	GGCC	5 cut(s)	139, 228, 241, 292, 429
ApaI	GGGCCC	1 cut(s)	232
ApeKI	GCWGC	1 cut(s)	45
ApoI	RAATTY	2 cut(s)	326, 409
ArsI	GACNNNNNNTTYG	2 cut(s)	174, 206
AseI	ATTAAT	1 cut(s)	674
Asp700I	GAANNNNTTC	1 cut(s)	341
AspLEI	GCGC	2 cut(s)	866, 917
AspS9I	GGNCC	4 cut(s)	228, 229, 242, 927
AsuC2I	CCSGG	1 cut(s)	787
AsuHPI	GGTGA	3 cut(s)	91, 541, 793
AvaII	GGWCC	1 cut(s)	927
BaeGI	GKGCMC	2 cut(s)	33, 232
BanII	GRGCYC	2 cut(s)	232, 614
BauI	CACGAG	2 cut(s)	296, 760
BbrPI	CACGTG	1 cut(s)	912
Bbv12I	GWGCWC	1 cut(s)	614
BbvI	GCAGC	1 cut(s)	32
BccI	CCATC	5 cut(s)	59, 254, 355, 985, 1183
BceAI	ACGGC	6 cut(s)	195, 256, 416, 433, 535, 1024
BciT130I	CCWGG	2 cut(s)	631, 872
BclI	TGATCA	2 cut(s)	216, 546
BcnI	CCSGG	1 cut(s)	787
BcoDI	GTCTC	3 cut(s)	78, 516, 775
BfaI	CTAG	2 cut(s)	1059, 1103
BfoI	RGCGCY	1 cut(s)	867
BfuAI	ACCTGC	1 cut(s)	915
BisI	GCNGC	4 cut(s)	46, 292, 960, 996
BlsI	GCNGC	4 cut(s)	47, 293, 961, 997
Bme1390I	CCNGG	3 cut(s)	631, 787, 872
Bme18I	GGWCC	1 cut(s)	927
BmgT120I	GGNCC	4 cut(s)	228, 229, 242, 927
BmiI	GGNNCC	3 cut(s)	230, 244, 945
BmrFI	CCNGG	3 cut(s)	631, 787, 872
BmsI	GCATC	2 cut(s)	126, 1098
BoxI	GACNNNNGTC	1 cut(s)	150
BpmI	CTGGAG	1 cut(s)	158
BpuMI	CCSGG	1 cut(s)	787
BsaAI	YACGTR	1 cut(s)	912
BsaHI	GRCGYC	7 cut(s)	63, 96, 135, 522, 657, 750, 858
BsaI	GGTCTC	2 cut(s)	78, 775
BsaJI	CCNNGG	5 cut(s)	57, 238, 289, 630, 870
BsaWI	WCCGGW	3 cut(s)	561, 735, 810
BsaXI	ACNNNNNCTCC	6 cut(s)	911, 941, 1018, 1048, 1135, 1165
Bse118I	RCCGGY	2 cut(s)	92, 137
Bse1I	ACTGG	2 cut(s)	131, 175
Bse3DI	GCAATG	1 cut(s)	1087
BseBI	CCWGG	2 cut(s)	631, 872
BseDI	CCNNGG	5 cut(s)	57, 238, 289, 630, 870
BseGI	GGATG	3 cut(s)	117, 1152, 1194
BseMI	GCAATG	1 cut(s)	1087
BseMII	CTCAG	2 cut(s)	599, 738
BseNI	ACTGG	2 cut(s)	131, 175
BseRI	GAGGAG	4 cut(s)	19, 250, 1090, 1156
BseSI	GKGCMC	2 cut(s)	33, 232
BseX3I	CGGCCG	1 cut(s)	429
BseXI	GCAGC	1 cut(s)	32
Bsh1236I	CGCG	3 cut(s)	291, 311, 917
Bsh1285I	CGRYCG	3 cut(s)	109, 432, 736
BshFI	GGCC	5 cut(s)	141, 230, 243, 294, 431
BsiEI	CGRYCG	3 cut(s)	109, 432, 736
BsiHKAI	GWGCWC	1 cut(s)	614
BsiSI	CCGG	7 cut(s)	93, 138, 428, 562, 736, 787, 811
BslFI	GGGAC	4 cut(s)	23, 138, 176, 705
BsmAI	GTCTC	3 cut(s)	78, 516, 775
BsmBI	CGTCTC	1 cut(s)	516
BsmFI	GGGAC	4 cut(s)	23, 138, 176, 705
BsnI	GGCC	5 cut(s)	141, 230, 243, 294, 431
Bso31I	GGTCTC	2 cut(s)	78, 775
Bsp120I	GGGCCC	1 cut(s)	228
Bsp1286I	GDGCHC	3 cut(s)	33, 232, 614
Bsp143I	GATC	4 cut(s)	168, 216, 546, 618
Bsp19I	CCATGG	1 cut(s)	57
Bsp68I	TCGCGA	1 cut(s)	311
BspANI	GGCC	5 cut(s)	141, 230, 243, 294, 431
BspCNI	CTCAG	2 cut(s)	600, 737
BspFNI	CGCG	3 cut(s)	291, 311, 917
BspHI	TCATGA	2 cut(s)	66, 1137
BspLI	GGNNCC	3 cut(s)	230, 244, 945
BspMI	ACCTGC	1 cut(s)	915
BspPI	GGATC	1 cut(s)	163
BspTNI	GGTCTC	2 cut(s)	78, 775
BsrDI	GCAATG	1 cut(s)	1087
BsrFI	RCCGGY	2 cut(s)	92, 137
BsrI	ACTGG	2 cut(s)	131, 175
BssAI	RCCGGY	2 cut(s)	92, 137
BssECI	CCNNGG	5 cut(s)	57, 238, 289, 630, 870
BssMI	GATC	4 cut(s)	168, 216, 546, 618
BssNI	GRCGYC	7 cut(s)	63, 96, 135, 522, 657, 750, 858
BssSI	CACGAG	2 cut(s)	296, 760
BssT1I	CCWWGG	1 cut(s)	57
Bst2BI	CACGAG	2 cut(s)	296, 760
Bst2UI	CCWGG	2 cut(s)	631, 872
Bst4CI	ACNGT	3 cut(s)	110, 696, 703
Bst6I	CTCTTC	2 cut(s)	347, 580
BstACI	GRCGYC	7 cut(s)	63, 96, 135, 522, 657, 750, 858
BstBAI	YACGTR	1 cut(s)	912
BstC8I	GCNNGC	2 cut(s)	139, 743
BstDEI	CTNAG	3 cut(s)	608, 724, 1092
BstDSI	CCRYGG	3 cut(s)	57, 238, 289
BstEII	GGTNACC	1 cut(s)	781
BstF5I	GGATG	3 cut(s)	117, 1152, 1194
BstFNI	CGCG	3 cut(s)	291, 311, 917
BstH2I	RGCGCY	1 cut(s)	867
BstHHI	GCGC	2 cut(s)	866, 917
BstKTI	GATC	4 cut(s)	171, 219, 549, 621
BstMAI	GTCTC	3 cut(s)	78, 516, 775
BstMBI	GATC	4 cut(s)	168, 216, 546, 618
BstMCI	CGRYCG	3 cut(s)	109, 432, 736
BstMWI	GCNNNNNNNGC	9 cut(s)	609, 656, 872, 881, 914, 921, 965, 1035, 1108
BstNI	CCWGG	2 cut(s)	631, 872
BstPAI	GACNNNNGTC	1 cut(s)	150
BstPI	GGTNACC	1 cut(s)	781
BstSCI	CCNGG	3 cut(s)	629, 785, 870
BstSLI	GKGCMC	2 cut(s)	33, 232
BstUI	CGCG	3 cut(s)	291, 311, 917
BstV1I	GCAGC	1 cut(s)	32
BstX2I	RGATCY	1 cut(s)	168
BstXI	CCANNNNNNTGG	2 cut(s)	58, 637
BstYI	RGATCY	1 cut(s)	168
BstZI	CGGCCG	1 cut(s)	429
BsuRI	GGCC	5 cut(s)	141, 230, 243, 294, 431
BtgI	CCRYGG	3 cut(s)	57, 238, 289
BtgZI	GCGATG	1 cut(s)	899
BtsCI	GGATG	3 cut(s)	117, 1152, 1194
BtsIMutI	CAGTG	1 cut(s)	124
BtuMI	TCGCGA	1 cut(s)	311
BveI	ACCTGC	1 cut(s)	915
Cac8I	GCNNGC	2 cut(s)	139, 743
CciI	TCATGA	2 cut(s)	66, 1137
CfoI	GCGC	2 cut(s)	866, 917
Cfr10I	RCCGGY	2 cut(s)	92, 137
Cfr13I	GGNCC	4 cut(s)	228, 229, 242, 927
Cfr42I	CCGCGG	1 cut(s)	292
CseI	GACGC	4 cut(s)	85, 143, 511, 665
Csp6I	GTAC	1 cut(s)	704
CviAII	CATG	7 cut(s)	58, 67, 163, 1039, 1138, 1210, 1225
CviQI	GTAC	1 cut(s)	704
DdeI	CTNAG	3 cut(s)	608, 724, 1092
DpnI	GATC	4 cut(s)	170, 218, 548, 620
DpnII	GATC	4 cut(s)	168, 216, 546, 618
EaeI	YGGCCR	2 cut(s)	139, 429
EagI	CGGCCG	1 cut(s)	429
Eam1104I	CTCTTC	2 cut(s)	347, 580
EarI	CTCTTC	2 cut(s)	347, 580
EciI	GGCGGA	4 cut(s)	197, 616, 890, 983
Ecl136II	GAGCTC	1 cut(s)	612
EclXI	CGGCCG	1 cut(s)	429
Eco130I	CCWWGG	1 cut(s)	57
Eco24I	GRGCYC	2 cut(s)	232, 614
Eco31I	GGTCTC	2 cut(s)	78, 775
Eco47I	GGWCC	1 cut(s)	927
Eco47III	AGCGCT	1 cut(s)	865
Eco52I	CGGCCG	1 cut(s)	429
Eco53kI	GAGCTC	1 cut(s)	612
Eco72I	CACGTG	1 cut(s)	912
Eco91I	GGTNACC	1 cut(s)	781
EcoICRI	GAGCTC	1 cut(s)	612
EcoO65I	GGTNACC	1 cut(s)	781
EcoRII	CCWGG	2 cut(s)	629, 870
EcoT14I	CCWWGG	1 cut(s)	57
EcoT38I	GRGCYC	2 cut(s)	232, 614
ErhI	CCWWGG	1 cut(s)	57
Esp3I	CGTCTC	1 cut(s)	516
FaeI	CATG	7 cut(s)	61, 70, 166, 1042, 1141, 1213, 1228
FaqI	GGGAC	4 cut(s)	23, 138, 176, 705
FatI	CATG	7 cut(s)	57, 66, 162, 1038, 1137, 1209, 1224
FauI	CCCGC	3 cut(s)	163, 262, 932
FbaI	TGATCA	2 cut(s)	216, 546
Fnu4HI	GCNGC	4 cut(s)	46, 292, 960, 996
FokI	GGATG	3 cut(s)	104, 1159, 1201
FriOI	GRGCYC	2 cut(s)	232, 614
Fsp4HI	GCNGC	4 cut(s)	46, 292, 960, 996
FspBI	CTAG	2 cut(s)	1059, 1103
GlaI	GCGC	2 cut(s)	865, 916
GluI	GCNGC	4 cut(s)	46, 292, 960, 996
GsuI	CTGGAG	1 cut(s)	158
HaeII	RGCGCY	1 cut(s)	867
HaeIII	GGCC	5 cut(s)	141, 230, 243, 294, 431
HapII	CCGG	7 cut(s)	93, 138, 428, 562, 736, 787, 811
HgaI	GACGC	4 cut(s)	85, 143, 511, 665
HhaI	GCGC	2 cut(s)	866, 917
Hin1I	GRCGYC	7 cut(s)	63, 96, 135, 522, 657, 750, 858
Hin1II	CATG	7 cut(s)	61, 70, 166, 1042, 1141, 1213, 1228
Hin6I	GCGC	2 cut(s)	864, 915
HinP1I	GCGC	2 cut(s)	864, 915
HincII	GTYRAC	2 cut(s)	699, 720
HindII	GTYRAC	2 cut(s)	699, 720
HinfI	GANTC	6 cut(s)	337, 391, 580, 623, 662, 819
HpaII	CCGG	7 cut(s)	93, 138, 428, 562, 736, 787, 811
HphI	GGTGA	3 cut(s)	91, 541, 793
Hpy166II	GTNNAC	2 cut(s)	699, 720
Hpy188I	TCNGA	7 cut(s)	216, 277, 609, 727, 802, 818, 931
Hpy188III	TCNNGA	5 cut(s)	67, 310, 476, 847, 1138
Hpy8I	GTNNAC	2 cut(s)	699, 720
Hpy99I	CGWCG	9 cut(s)	137, 437, 440, 527, 530, 659, 752, 755, 1003
HpyAV	CCTTC	6 cut(s)	49, 449, 874, 976, 1121, 1159
HpyCH4III	ACNGT	3 cut(s)	110, 696, 703
HpyCH4IV	ACGT	5 cut(s)	27, 63, 750, 858, 911
HpyCH4V	TGCA	7 cut(s)	166, 301, 538, 595, 745, 1038, 1111
HpyF10VI	GCNNNNNNNGC	9 cut(s)	609, 656, 872, 881, 914, 921, 965, 1035, 1108
HpyF3I	CTNAG	3 cut(s)	608, 724, 1092
HpySE526I	ACGT	5 cut(s)	27, 63, 750, 858, 911
Hsp92I	GRCGYC	7 cut(s)	63, 96, 135, 522, 657, 750, 858
Hsp92II	CATG	7 cut(s)	61, 70, 166, 1042, 1141, 1213, 1228
HspAI	GCGC	2 cut(s)	864, 915
KroI	GCCGGC	1 cut(s)	137
KroNI	GCCGGC	1 cut(s)	139
Ksp22I	TGATCA	2 cut(s)	216, 546
KspI	CCGCGG	1 cut(s)	292
Kzo9I	GATC	4 cut(s)	168, 216, 546, 618
LmnI	GCTCC	5 cut(s)	291, 738, 943, 1026, 1077
Lsp1109I	GCAGC	1 cut(s)	32
LweI	GCATC	2 cut(s)	126, 1098
MaeI	CTAG	2 cut(s)	1059, 1103
MaeII	ACGT	5 cut(s)	27, 63, 750, 858, 911
MaeIII	GTNAC	2 cut(s)	97, 781
MalI	GATC	4 cut(s)	170, 218, 548, 620
MboI	GATC	4 cut(s)	168, 216, 546, 618
MboII	GAAGA	3 cut(s)	334, 567, 628
MfeI	CAATTG	3 cut(s)	533, 542, 584
MflI	RGATCY	1 cut(s)	168
MhlI	GDGCHC	3 cut(s)	33, 232, 614
MluCI	AATT	9 cut(s)	326, 346, 409, 465, 533, 542, 565, 584, 827
MlyI	GAGTC	2 cut(s)	656, 813
MmeI	TCCRAC	1 cut(s)	300
MroNI	GCCGGC	1 cut(s)	137
MroXI	GAANNNNTTC	1 cut(s)	341
MseI	TTAA	1 cut(s)	674
MslI	CAYNNNNRTG	2 cut(s)	26, 56
MspA1I	CMGCKG	2 cut(s)	45, 291
MspI	CCGG	7 cut(s)	93, 138, 428, 562, 736, 787, 811
MspR9I	CCNGG	3 cut(s)	631, 787, 872
MunI	CAATTG	3 cut(s)	533, 542, 584
MvaI	CCWGG	2 cut(s)	631, 872
MvnI	CGCG	3 cut(s)	291, 311, 917
MwoI	GCNNNNNNNGC	9 cut(s)	609, 656, 872, 881, 914, 921, 965, 1035, 1108
NaeI	GCCGGC	1 cut(s)	139
NciI	CCSGG	1 cut(s)	787
NcoI	CCATGG	1 cut(s)	57
NdeII	GATC	4 cut(s)	168, 216, 546, 618
NgoMIV	GCCGGC	1 cut(s)	137
NlaIII	CATG	7 cut(s)	61, 70, 166, 1042, 1141, 1213, 1228
NlaIV	GGNNCC	3 cut(s)	230, 244, 945
NmeAIII	GCCGAG	1 cut(s)	706
NmuCI	GTSAC	2 cut(s)	97, 781
NruI	TCGCGA	1 cut(s)	311
PagI	TCATGA	2 cut(s)	66, 1137
PcsI	WCGNNNNNNNCGW	4 cut(s)	141, 429, 525, 995
PdiI	GCCGGC	1 cut(s)	139
PdmI	GAANNNNTTC	1 cut(s)	341
PfeI	GAWTC	4 cut(s)	337, 391, 580, 623
PflFI	GACNNNGTC	2 cut(s)	188, 787
PkrI	GCNGC	4 cut(s)	47, 293, 961, 997
PleI	GAGTC	2 cut(s)	656, 813
PmaCI	CACGTG	1 cut(s)	912
PmlI	CACGTG	1 cut(s)	912
PpsI	GAGTC	2 cut(s)	656, 813
Ppu21I	YACGTR	1 cut(s)	912
PshAI	GACNNNNGTC	1 cut(s)	150
PshBI	ATTAAT	1 cut(s)	674
Psp124BI	GAGCTC	1 cut(s)	614
Psp6I	CCWGG	2 cut(s)	629, 870
PspCI	CACGTG	1 cut(s)	912
PspEI	GGTNACC	1 cut(s)	781
PspGI	CCWGG	2 cut(s)	629, 870
PspN4I	GGNNCC	3 cut(s)	230, 244, 945
PspOMI	GGGCCC	1 cut(s)	228
PspPI	GGNCC	4 cut(s)	228, 229, 242, 927
PsuI	RGATCY	1 cut(s)	168
PsyI	GACNNNGTC	2 cut(s)	188, 787
RruI	TCGCGA	1 cut(s)	311
RsaI	GTAC	1 cut(s)	705
RsaNI	GTAC	1 cut(s)	704
RseI	CAYNNNNRTG	2 cut(s)	26, 56
SacI	GAGCTC	1 cut(s)	614
SacII	CCGCGG	1 cut(s)	292
SaqAI	TTAA	1 cut(s)	674
SatI	GCNGC	4 cut(s)	46, 292, 960, 996
Sau3AI	GATC	4 cut(s)	168, 216, 546, 618
Sau96I	GGNCC	4 cut(s)	228, 229, 242, 927
SchI	GAGTC	2 cut(s)	656, 813
ScrFI	CCNGG	3 cut(s)	631, 787, 872
SduI	GDGCHC	3 cut(s)	33, 232, 614
SfaNI	GCATC	2 cut(s)	126, 1098
Sfr303I	CCGCGG	1 cut(s)	292
SgrAI	CRCCGGYG	1 cut(s)	92
SgrBI	CCGCGG	1 cut(s)	292
SinI	GGWCC	1 cut(s)	927
SmiMI	CAYNNNNRTG	2 cut(s)	26, 56
Sse9I	AATT	9 cut(s)	326, 346, 409, 465, 533, 542, 565, 584, 827
SspMI	CTAG	2 cut(s)	1059, 1103
SstI	GAGCTC	1 cut(s)	614
StyD4I	CCNGG	3 cut(s)	629, 785, 870
StyI	CCWWGG	1 cut(s)	57
TaaI	ACNGT	3 cut(s)	110, 696, 703
TaiI	ACGT	5 cut(s)	30, 66, 753, 861, 914
TasI	AATT	9 cut(s)	326, 346, 409, 465, 533, 542, 565, 584, 827
TauI	GCSGC	3 cut(s)	294, 962, 998
TfiI	GAWTC	4 cut(s)	337, 391, 580, 623
Tru1I	TTAA	1 cut(s)	674
Tru9I	TTAA	1 cut(s)	674
TscAI	CASTG	1 cut(s)	131
TseFI	GTSAC	2 cut(s)	97, 781
TseI	GCWGC	1 cut(s)	45
Tsp45I	GTSAC	2 cut(s)	97, 781
TspDTI	ATGAA	5 cut(s)	820, 902, 995, 1126, 1178
TspGWI	ACGGA	2 cut(s)	851, 1016
TspRI	CASTG	1 cut(s)	131
Tth111I	GACNNNGTC	2 cut(s)	188, 787
VpaK11BI	GGWCC	1 cut(s)	927
VspI	ATTAAT	1 cut(s)	674
XapI	RAATTY	2 cut(s)	326, 409
XmnI	GAANNNNTTC	1 cut(s)	341
XspI	CTAG	2 cut(s)	1059, 1103
ZraI	GACGTC	3 cut(s)	64, 751, 859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.