RLG00000014884

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0022904
Physical Location & Seq
Forward (+)
59113687 .. 59116709
3023 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014884

Sequence Viewer

Length: 1041 bp
ATGGCCGGACCATCATCTCAACGGTCATCTCCTCTTTCATCTCAACCGCCATCTCCTTTTTCATCTCAACAGCCATCTCCAAGGTCAAGATTGATGGATTTCCCTTTCAAAAATGTGGTGGAGAAGATCACCCACAGAACACCGAGTAGTCCCAGGTGCAAGAAGATTGGAAAGAGAGGAGAGTACGGGCAATGGTTTCAGGGGAAAATCAAGCACCAAGAACAAGAGATTGAAGTCCTAGCGAGCAAGATCAAAGGAGATAAAGGTTTTAAGAACACTGCAGAATGGGCACAAGAGCTGCAAAGGCAGGCTTATTTACTGGATGAATTTGCTATGGATTACTTGATCATGAAGCCAATTGGGTATTGTTTGTGGGGATTGAAAGAGGACAACAAACTGAGGACTTTCATCGTATTCGGAGATCCTGATATTGTTACCATAATGGAGGAGAGTCTTCATAGGTTTTCAAAGAAGGAAAGGAAGGCAATGATTCCTTGGAAGACTAGGCCGCGTATTTTAGAGCACACTGCTCGTGCTCTTGGAGAGCTGCATTCTAAAATGATTTACTTTAGATGCTTTCGATCCACTCTGGTTTTCTTGGATGAGGAAGGTCAATCGTACATTCCGGCATGCAACATGTCCAAATTTGGCCTTCCCTATATGATGGATGAGGACTTAACTGCACCAAGCTTCAATGCTTACTTCCCTAATGAGAATGCTATGGTGGAGCACTTCAGTGTCCCCTCTAATCCTAGCATCAATTTACCTGCCAGAAATATGTACCGGTATGGCATATTCATGTTAGAAACTCTTACTGGAAAAAGATCTGTTGCTAGTAATTTTGGCCTAGATAATTTCTCACATGTCAAAGCCATGCATCAAATCTCAAATGATAATCTCGTGGATGATTCTTTGAAGACAGACGAAGGTTATAGTGGGGATATTTTCATTCATTTGGCTTCACTAGCGCTTGGAATCTTAAGAAACTCATGTCCAGACATAAACAACATTGTAGCAGAAATTGCTAATATCAGGATGTAA

Protein Analysis

347

Amino Acids

39.52

Weight (kDa)

8.66

Isoelectric Point (pI)

53.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022904)

Species Orthologous Gene IDs
rosa_laevigata RLG00000014884
rosa_samantha Rh4AG169000 Rh4BG165700 Rh4CG180500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 775
AccII CGCG 1 cut(s) 511
AciI CCGC 2 cut(s) 47, 509
AclWI GGATC 2 cut(s) 416, 576
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 326, 644
AcuI CTGAAG 1 cut(s) 718
AfaI GTAC 3 cut(s) 185, 620, 782
AfeI AGCGCT 1 cut(s) 969
AflII CTTAAG 1 cut(s) 979
AflIII ACRYGT 2 cut(s) 636, 862
AgeI ACCGGT 1 cut(s) 783
AgsI TTSAA 6 cut(s) 109, 233, 382, 468, 694, 916
AjnI CCWGG 1 cut(s) 152
AleI CACNNNNGTG 1 cut(s) 735
AluBI AGCT 3 cut(s) 298, 547, 690
AluI AGCT 3 cut(s) 298, 547, 690
Alw21I GWGCWC 3 cut(s) 525, 538, 732
AlwI GGATC 2 cut(s) 416, 576
Aor51HI AGCGCT 1 cut(s) 969
AoxI GGCC 4 cut(s) 3, 506, 649, 844
ApeKI GCWGC 2 cut(s) 298, 547
ApoI RAATTY 2 cut(s) 326, 644
AsiGI ACCGGT 1 cut(s) 783
AspLEI GCGC 1 cut(s) 970
AspS9I GGNCC 1 cut(s) 8
AsuHPI GGTGA 1 cut(s) 121
AvaII GGWCC 1 cut(s) 8
BaeGI GKGCMC 1 cut(s) 292
BauI CACGAG 2 cut(s) 531, 899
BbsI GAAGAC 3 cut(s) 446, 506, 923
Bbv12I GWGCWC 3 cut(s) 525, 538, 732
BbvI GCAGC 2 cut(s) 285, 534
BccI CCATC 5 cut(s) 19, 58, 82, 88, 658
BcgI CGANNNNNNTGC 2 cut(s) 512, 546
BciT130I CCWGG 1 cut(s) 154
BclI TGATCA 1 cut(s) 345
BfaI CTAG 6 cut(s) 239, 504, 753, 834, 848, 965
BfmI CTRYAG 1 cut(s) 279
BfoI RGCGCY 1 cut(s) 971
BfrI CTTAAG 1 cut(s) 979
BfuAI ACCTGC 1 cut(s) 775
BglII AGATCT 1 cut(s) 824
BisI GCNGC 3 cut(s) 299, 509, 548
BlsI GCNGC 3 cut(s) 300, 510, 549
Bme1390I CCNGG 1 cut(s) 154
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 1 cut(s) 8
BmrFI CCNGG 1 cut(s) 154
BmsI GCATC 3 cut(s) 563, 765, 886
BpiI GAAGAC 3 cut(s) 446, 506, 923
BsaJI CCNNGG 3 cut(s) 80, 152, 494
BsaWI WCCGGW 1 cut(s) 783
Bse118I RCCGGY 1 cut(s) 783
Bse1I ACTGG 2 cut(s) 324, 820
Bse3DI GCAATG 2 cut(s) 197, 492
BseBI CCWGG 1 cut(s) 154
BseDI CCNNGG 3 cut(s) 80, 152, 494
BseGI GGATG 5 cut(s) 328, 607, 673, 910, 1041
BseMI GCAATG 2 cut(s) 197, 492
BseMII CTCAG 1 cut(s) 389
BseNI ACTGG 2 cut(s) 324, 820
BseRI GAGGAG 3 cut(s) 21, 192, 461
BseSI GKGCMC 1 cut(s) 292
BseXI GCAGC 2 cut(s) 285, 534
BsgI GTGCAG 1 cut(s) 666
Bsh1236I CGCG 1 cut(s) 511
BshFI GGCC 4 cut(s) 5, 508, 651, 846
BshTI ACCGGT 1 cut(s) 783
BsiHKAI GWGCWC 3 cut(s) 525, 538, 732
BsiSI CCGG 3 cut(s) 6, 626, 784
BslFI GGGAC 2 cut(s) 135, 725
BsmFI GGGAC 2 cut(s) 135, 725
BsmI GAATGC 2 cut(s) 550, 721
BsnI GGCC 4 cut(s) 5, 508, 651, 846
Bsp1286I GDGCHC 4 cut(s) 292, 525, 538, 732
Bsp143I GATC 6 cut(s) 126, 249, 345, 421, 581, 824
BspACI CCGC 2 cut(s) 47, 509
BspANI GGCC 4 cut(s) 5, 508, 651, 846
BspCNI CTCAG 1 cut(s) 390
BspFNI CGCG 1 cut(s) 511
BspHI TCATGA 1 cut(s) 348
BspMAI CTGCAG 1 cut(s) 283
BspMI ACCTGC 1 cut(s) 775
BspPI GGATC 2 cut(s) 416, 576
BspTI CTTAAG 1 cut(s) 979
BsrDI GCAATG 2 cut(s) 197, 492
BsrFI RCCGGY 1 cut(s) 783
BsrI ACTGG 2 cut(s) 324, 820
BssAI RCCGGY 1 cut(s) 783
BssECI CCNNGG 3 cut(s) 80, 152, 494
BssMI GATC 6 cut(s) 126, 249, 345, 421, 581, 824
BssSI CACGAG 2 cut(s) 531, 899
BssT1I CCWWGG 2 cut(s) 80, 494
Bst2BI CACGAG 2 cut(s) 531, 899
Bst2UI CCWGG 1 cut(s) 154
Bst4CI ACNGT 1 cut(s) 24
BstAFI CTTAAG 1 cut(s) 979
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstC8I GCNNGC 3 cut(s) 244, 309, 631
BstDEI CTNAG 1 cut(s) 398
BstF5I GGATG 5 cut(s) 328, 607, 673, 910, 1041
BstFNI CGCG 1 cut(s) 511
BstH2I RGCGCY 1 cut(s) 971
BstHHI GCGC 1 cut(s) 970
BstKTI GATC 6 cut(s) 129, 252, 348, 424, 584, 827
BstMBI GATC 6 cut(s) 126, 249, 345, 421, 581, 824
BstMWI GCNNNNNNNGC 4 cut(s) 287, 304, 965, 1022
BstNI CCWGG 1 cut(s) 154
BstNSI RCATGY 3 cut(s) 633, 640, 866
BstSCI CCNGG 1 cut(s) 152
BstSFI CTRYAG 1 cut(s) 279
BstSLI GKGCMC 1 cut(s) 292
BstUI CGCG 1 cut(s) 511
BstV1I GCAGC 2 cut(s) 285, 534
BstV2I GAAGAC 3 cut(s) 446, 506, 923
BstX2I RGATCY 2 cut(s) 421, 824
BstYI RGATCY 2 cut(s) 421, 824
BsuRI GGCC 4 cut(s) 5, 508, 651, 846
BtsCI GGATG 5 cut(s) 328, 607, 673, 910, 1041
BtsI GCAGTG 2 cut(s) 276, 525
BtsIMutI CAGTG 3 cut(s) 276, 525, 742
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 3 cut(s) 244, 309, 631
CciI TCATGA 1 cut(s) 348
CfoI GCGC 1 cut(s) 970
Cfr10I RCCGGY 1 cut(s) 783
Cfr13I GGNCC 1 cut(s) 8
Csp6I GTAC 3 cut(s) 184, 619, 781
CspAI ACCGGT 1 cut(s) 783
CviAII CATG 7 cut(s) 349, 630, 637, 799, 863, 874, 990
CviQI GTAC 3 cut(s) 184, 619, 781
DdeI CTNAG 1 cut(s) 398
DpnI GATC 6 cut(s) 128, 251, 347, 423, 583, 826
DpnII GATC 6 cut(s) 126, 249, 345, 421, 581, 824
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 2 cut(s) 80, 494
Eco47I GGWCC 1 cut(s) 8
Eco47III AGCGCT 1 cut(s) 969
Eco57I CTGAAG 1 cut(s) 718
EcoRII CCWGG 1 cut(s) 152
EcoT14I CCWWGG 2 cut(s) 80, 494
EcoT22I ATGCAT 1 cut(s) 879
ErhI CCWWGG 2 cut(s) 80, 494
FaeI CATG 7 cut(s) 352, 633, 640, 802, 866, 877, 993
FalI AAGNNNNNCTT 2 cut(s) 295, 327
FaqI GGGAC 2 cut(s) 135, 725
FatI CATG 7 cut(s) 348, 629, 636, 798, 862, 873, 989
FbaI TGATCA 1 cut(s) 345
Fnu4HI GCNGC 3 cut(s) 299, 509, 548
FokI GGATG 4 cut(s) 335, 614, 680, 917
Fsp4HI GCNGC 3 cut(s) 299, 509, 548
FspBI CTAG 6 cut(s) 239, 504, 753, 834, 848, 965
GlaI GCGC 1 cut(s) 969
GluI GCNGC 3 cut(s) 299, 509, 548
HaeII RGCGCY 1 cut(s) 971
HaeIII GGCC 4 cut(s) 5, 508, 651, 846
HapII CCGG 3 cut(s) 6, 626, 784
HhaI GCGC 1 cut(s) 970
Hin1II CATG 7 cut(s) 352, 633, 640, 802, 866, 877, 993
Hin6I GCGC 1 cut(s) 968
HinP1I GCGC 1 cut(s) 968
HindIII AAGCTT 1 cut(s) 688
HinfI GANTC 4 cut(s) 451, 490, 908, 975
HpaII CCGG 3 cut(s) 6, 626, 784
HphI GGTGA 1 cut(s) 121
Hpy188I TCNGA 1 cut(s) 419
Hpy188III TCNNGA 5 cut(s) 87, 349, 425, 995, 1033
HpyAV CCTTC 5 cut(s) 466, 475, 602, 662, 920
HpyCH4III ACNGT 1 cut(s) 24
HpyCH4V TGCA 7 cut(s) 159, 281, 301, 550, 633, 683, 877
HpyF10VI GCNNNNNNNGC 4 cut(s) 287, 304, 965, 1022
HpyF3I CTNAG 1 cut(s) 398
Hsp92II CATG 7 cut(s) 352, 633, 640, 802, 866, 877, 993
HspAI GCGC 1 cut(s) 968
Ksp22I TGATCA 1 cut(s) 345
Kzo9I GATC 6 cut(s) 126, 249, 345, 421, 581, 824
LmnI GCTCC 1 cut(s) 727
Lsp1109I GCAGC 2 cut(s) 285, 534
LweI GCATC 3 cut(s) 563, 765, 886
MaeI CTAG 6 cut(s) 239, 504, 753, 834, 848, 965
MaeIII GTNAC 1 cut(s) 433
MalI GATC 6 cut(s) 128, 251, 347, 423, 583, 826
MboI GATC 6 cut(s) 126, 249, 345, 421, 581, 824
MboII GAAGA 5 cut(s) 136, 175, 446, 511, 928
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 2 cut(s) 421, 824
MhlI GDGCHC 4 cut(s) 292, 525, 538, 732
MluCI AATT 7 cut(s) 326, 357, 644, 760, 838, 853, 1020
MlyI GAGTC 1 cut(s) 460
MnlI CCTC 8 cut(s) 42, 170, 379, 393, 439, 598, 664, 754
Mph1103I ATGCAT 1 cut(s) 879
MseI TTAA 3 cut(s) 270, 677, 980
MslI CAYNNNNRTG 2 cut(s) 735, 797
MspCI CTTAAG 1 cut(s) 979
MspI CCGG 3 cut(s) 6, 626, 784
MspR9I CCNGG 1 cut(s) 154
MunI CAATTG 1 cut(s) 357
Mva1269I GAATGC 2 cut(s) 550, 721
MvaI CCWGG 1 cut(s) 154
MvnI CGCG 1 cut(s) 511
MwoI GCNNNNNNNGC 4 cut(s) 287, 304, 965, 1022
NdeII GATC 6 cut(s) 126, 249, 345, 421, 581, 824
NlaIII CATG 7 cut(s) 352, 633, 640, 802, 866, 877, 993
NsiI ATGCAT 1 cut(s) 879
NspI RCATGY 3 cut(s) 633, 640, 866
OliI CACNNNNGTG 1 cut(s) 735
PaeI GCATGC 1 cut(s) 633
PagI TCATGA 1 cut(s) 348
PciI ACATGT 2 cut(s) 636, 862
PctI GAATGC 2 cut(s) 550, 721
PfeI GAWTC 3 cut(s) 490, 908, 975
PinAI ACCGGT 1 cut(s) 783
PkrI GCNGC 3 cut(s) 300, 510, 549
PleI GAGTC 1 cut(s) 459
PpsI GAGTC 1 cut(s) 459
PscI ACATGT 2 cut(s) 636, 862
Psp6I CCWGG 1 cut(s) 152
PspGI CCWGG 1 cut(s) 152
PspPI GGNCC 1 cut(s) 8
PstI CTGCAG 1 cut(s) 283
PsuI RGATCY 2 cut(s) 421, 824
RsaI GTAC 3 cut(s) 185, 620, 782
RsaNI GTAC 3 cut(s) 184, 619, 781
RseI CAYNNNNRTG 2 cut(s) 735, 797
SaqAI TTAA 3 cut(s) 270, 677, 980
SatI GCNGC 3 cut(s) 299, 509, 548
Sau3AI GATC 6 cut(s) 126, 249, 345, 421, 581, 824
Sau96I GGNCC 1 cut(s) 8
SchI GAGTC 1 cut(s) 460
ScrFI CCNGG 1 cut(s) 154
SduI GDGCHC 4 cut(s) 292, 525, 538, 732
SfaNI GCATC 3 cut(s) 563, 765, 886
SfcI CTRYAG 1 cut(s) 279
SinI GGWCC 1 cut(s) 8
SmiMI CAYNNNNRTG 2 cut(s) 735, 797
SmlI CTYRAG 1 cut(s) 979
SmoI CTYRAG 1 cut(s) 979
SphI GCATGC 1 cut(s) 633
Sse9I AATT 7 cut(s) 326, 357, 644, 760, 838, 853, 1020
SsiI CCGC 2 cut(s) 47, 509
SspMI CTAG 6 cut(s) 239, 504, 753, 834, 848, 965
StyD4I CCNGG 1 cut(s) 152
StyI CCWWGG 2 cut(s) 80, 494
TaaI ACNGT 1 cut(s) 24
TaqI TCGA 1 cut(s) 580
TasI AATT 7 cut(s) 326, 357, 644, 760, 838, 853, 1020
TauI GCSGC 1 cut(s) 511
TfiI GAWTC 3 cut(s) 490, 908, 975
Tru1I TTAA 3 cut(s) 270, 677, 980
Tru9I TTAA 3 cut(s) 270, 677, 980
TscAI CASTG 3 cut(s) 283, 532, 742
TseI GCWGC 2 cut(s) 298, 547
TspDTI ATGAA 9 cut(s) 27, 51, 339, 365, 397, 446, 787, 937, 941
TspRI CASTG 3 cut(s) 283, 532, 742
Vha464I CTTAAG 1 cut(s) 979
VpaK11BI GGWCC 1 cut(s) 8
XapI RAATTY 2 cut(s) 326, 644
XceI RCATGY 3 cut(s) 633, 640, 866
XspI CTAG 6 cut(s) 239, 504, 753, 834, 848, 965
Zsp2I ATGCAT 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.