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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000015697 |
| rosa_multiflora | Rmu_sc0007908.1_g000003 Rmu_sc0020315.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00155290 |
| rosa_samantha | Rh2CG011300 Rh2DG012200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 260 |
| AccI | GTMKAC | 2 cut(s) | 69, 354 |
| AccII | CGCG | 1 cut(s) | 252 |
| AciI | CCGC | 1 cut(s) | 460 |
| AclWI | GGATC | 1 cut(s) | 8 |
| AcsI | RAATTY | 1 cut(s) | 372 |
| AcuI | CTGAAG | 1 cut(s) | 368 |
| AfaI | GTAC | 1 cut(s) | 277 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 84, 105 |
| AgsI | TTSAA | 2 cut(s) | 34, 199 |
| Alw26I | GTCTC | 1 cut(s) | 288 |
| AlwI | GGATC | 1 cut(s) | 8 |
| AoxI | GGCC | 2 cut(s) | 56, 107 |
| ApoI | RAATTY | 1 cut(s) | 372 |
| AspLEI | GCGC | 1 cut(s) | 252 |
| AspS9I | GGNCC | 1 cut(s) | 108 |
| AsuC2I | CCSGG | 1 cut(s) | 85 |
| AsuHPI | GGTGA | 3 cut(s) | 73, 88, 438 |
| BanII | GRGCYC | 1 cut(s) | 457 |
| BauI | CACGAG | 1 cut(s) | 38 |
| BccI | CCATC | 2 cut(s) | 86, 229 |
| BcnI | CCSGG | 1 cut(s) | 85 |
| BcoDI | GTCTC | 1 cut(s) | 288 |
| BfaI | CTAG | 2 cut(s) | 348, 496 |
| BfmI | CTRYAG | 1 cut(s) | 289 |
| Bme1390I | CCNGG | 1 cut(s) | 85 |
| BmgT120I | GGNCC | 1 cut(s) | 108 |
| BmrFI | CCNGG | 1 cut(s) | 85 |
| BmrI | ACTGGG | 1 cut(s) | 321 |
| BmsI | GCATC | 1 cut(s) | 433 |
| BmuI | ACTGGG | 1 cut(s) | 321 |
| BpmI | CTGGAG | 1 cut(s) | 469 |
| BpuMI | CCSGG | 1 cut(s) | 85 |
| BsaJI | CCNNGG | 2 cut(s) | 17, 449 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 84, 105 |
| Bse118I | RCCGGY | 1 cut(s) | 343 |
| Bse1I | ACTGG | 2 cut(s) | 59, 316 |
| BseDI | CCNNGG | 2 cut(s) | 17, 449 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 84, 105 |
| BseNI | ACTGG | 2 cut(s) | 59, 316 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| Bsh1236I | CGCG | 1 cut(s) | 252 |
| BshFI | GGCC | 2 cut(s) | 58, 109 |
| BsiSI | CCGG | 2 cut(s) | 84, 344 |
| BslFI | GGGAC | 2 cut(s) | 100, 125 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 84, 105 |
| BsmAI | GTCTC | 1 cut(s) | 288 |
| BsmFI | GGGAC | 2 cut(s) | 100, 125 |
| BsmI | GAATGC | 1 cut(s) | 194 |
| BsnI | GGCC | 2 cut(s) | 58, 109 |
| Bsp1286I | GDGCHC | 1 cut(s) | 457 |
| Bsp143I | GATC | 1 cut(s) | 13 |
| BspACI | CCGC | 1 cut(s) | 460 |
| BspANI | GGCC | 2 cut(s) | 58, 109 |
| BspFNI | CGCG | 1 cut(s) | 252 |
| BspPI | GGATC | 1 cut(s) | 8 |
| BsrFI | RCCGGY | 1 cut(s) | 343 |
| BsrI | ACTGG | 2 cut(s) | 59, 316 |
| BssAI | RCCGGY | 1 cut(s) | 343 |
| BssECI | CCNNGG | 2 cut(s) | 17, 449 |
| BssMI | GATC | 1 cut(s) | 13 |
| BssSI | CACGAG | 1 cut(s) | 38 |
| BssT1I | CCWWGG | 2 cut(s) | 17, 449 |
| Bst2BI | CACGAG | 1 cut(s) | 38 |
| Bst4CI | ACNGT | 2 cut(s) | 152, 305 |
| BstFNI | CGCG | 1 cut(s) | 252 |
| BstHHI | GCGC | 1 cut(s) | 252 |
| BstKTI | GATC | 1 cut(s) | 16 |
| BstMAI | GTCTC | 1 cut(s) | 288 |
| BstMBI | GATC | 1 cut(s) | 13 |
| BstNSI | RCATGY | 1 cut(s) | 26 |
| BstSCI | CCNGG | 1 cut(s) | 83 |
| BstSFI | CTRYAG | 1 cut(s) | 289 |
| BstUI | CGCG | 1 cut(s) | 252 |
| BsuRI | GGCC | 2 cut(s) | 58, 109 |
| BtsIMutI | CAGTG | 1 cut(s) | 309 |
| CfoI | GCGC | 1 cut(s) | 252 |
| Cfr10I | RCCGGY | 1 cut(s) | 343 |
| Cfr13I | GGNCC | 1 cut(s) | 108 |
| CseI | GACGC | 1 cut(s) | 365 |
| Csp6I | GTAC | 1 cut(s) | 276 |
| CviAII | CATG | 2 cut(s) | 23, 323 |
| CviJI | RGCY | 5 cut(s) | 58, 109, 347, 455, 489 |
| CviKI_1 | RGCY | 5 cut(s) | 58, 109, 347, 455, 489 |
| CviQI | GTAC | 1 cut(s) | 276 |
| DpnI | GATC | 1 cut(s) | 15 |
| DpnII | GATC | 1 cut(s) | 13 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 260 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 260 |
| Eco130I | CCWWGG | 2 cut(s) | 17, 449 |
| Eco24I | GRGCYC | 1 cut(s) | 457 |
| Eco57I | CTGAAG | 1 cut(s) | 368 |
| EcoT14I | CCWWGG | 2 cut(s) | 17, 449 |
| EcoT38I | GRGCYC | 1 cut(s) | 457 |
| ErhI | CCWWGG | 2 cut(s) | 17, 449 |
| FaeI | CATG | 2 cut(s) | 26, 326 |
| FaiI | YATR | 3 cut(s) | 24, 291, 324 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 323, 355 |
| FaqI | GGGAC | 2 cut(s) | 100, 125 |
| FatI | CATG | 2 cut(s) | 22, 322 |
| FauI | CCCGC | 1 cut(s) | 453 |
| FblI | GTMKAC | 2 cut(s) | 69, 354 |
| FriOI | GRGCYC | 1 cut(s) | 457 |
| FspBI | CTAG | 2 cut(s) | 348, 496 |
| GlaI | GCGC | 1 cut(s) | 251 |
| GsuI | CTGGAG | 1 cut(s) | 469 |
| HaeIII | GGCC | 2 cut(s) | 58, 109 |
| HapII | CCGG | 2 cut(s) | 84, 344 |
| HgaI | GACGC | 1 cut(s) | 365 |
| HhaI | GCGC | 1 cut(s) | 252 |
| Hin1II | CATG | 2 cut(s) | 26, 326 |
| Hin6I | GCGC | 1 cut(s) | 250 |
| HinP1I | GCGC | 1 cut(s) | 250 |
| HincII | GTYRAC | 2 cut(s) | 70, 355 |
| HindII | GTYRAC | 2 cut(s) | 70, 355 |
| HinfI | GANTC | 4 cut(s) | 46, 88, 226, 351 |
| HpaII | CCGG | 2 cut(s) | 84, 344 |
| HphI | GGTGA | 3 cut(s) | 73, 88, 438 |
| Hpy166II | GTNNAC | 3 cut(s) | 70, 355, 469 |
| Hpy188I | TCNGA | 3 cut(s) | 51, 157, 225 |
| Hpy188III | TCNNGA | 1 cut(s) | 199 |
| Hpy8I | GTNNAC | 3 cut(s) | 70, 355, 469 |
| Hpy99I | CGWCG | 3 cut(s) | 257, 309, 359 |
| HpyCH4III | ACNGT | 2 cut(s) | 152, 305 |
| HpyCH4V | TGCA | 2 cut(s) | 424, 440 |
| Hsp92II | CATG | 2 cut(s) | 26, 326 |
| HspAI | GCGC | 1 cut(s) | 250 |
| Kzo9I | GATC | 1 cut(s) | 13 |
| LpnPI | CCDG | 8 cut(s) | 40, 97, 243, 292, 297, 345, 357, 404 |
| LweI | GCATC | 1 cut(s) | 433 |
| MaeI | CTAG | 2 cut(s) | 348, 496 |
| MaeIII | GTNAC | 2 cut(s) | 178, 395 |
| MalI | GATC | 1 cut(s) | 15 |
| MboI | GATC | 1 cut(s) | 13 |
| MboII | GAAGA | 3 cut(s) | 22, 226, 369 |
| MfeI | CAATTG | 1 cut(s) | 389 |
| MhlI | GDGCHC | 1 cut(s) | 457 |
| MluCI | AATT | 2 cut(s) | 372, 389 |
| MlyI | GAGTC | 2 cut(s) | 82, 360 |
| MnlI | CCTC | 1 cut(s) | 493 |
| MseI | TTAA | 2 cut(s) | 125, 330 |
| MslI | CAYNNNNRTG | 1 cut(s) | 187 |
| MspI | CCGG | 2 cut(s) | 84, 344 |
| MspR9I | CCNGG | 1 cut(s) | 85 |
| MunI | CAATTG | 1 cut(s) | 389 |
| Mva1269I | GAATGC | 1 cut(s) | 194 |
| MvnI | CGCG | 1 cut(s) | 252 |
| NciI | CCSGG | 1 cut(s) | 85 |
| NdeII | GATC | 1 cut(s) | 13 |
| NlaIII | CATG | 2 cut(s) | 26, 326 |
| NspI | RCATGY | 1 cut(s) | 26 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 261 |
| PctI | GAATGC | 1 cut(s) | 194 |
| PfeI | GAWTC | 2 cut(s) | 46, 226 |
| PleI | GAGTC | 2 cut(s) | 82, 359 |
| PpsI | GAGTC | 2 cut(s) | 82, 359 |
| PspPI | GGNCC | 1 cut(s) | 108 |
| RsaI | GTAC | 1 cut(s) | 277 |
| RsaNI | GTAC | 1 cut(s) | 276 |
| RseI | CAYNNNNRTG | 1 cut(s) | 187 |
| SalI | GTCGAC | 2 cut(s) | 68, 353 |
| SaqAI | TTAA | 2 cut(s) | 125, 330 |
| Sau3AI | GATC | 1 cut(s) | 13 |
| Sau96I | GGNCC | 1 cut(s) | 108 |
| SchI | GAGTC | 2 cut(s) | 82, 360 |
| ScrFI | CCNGG | 1 cut(s) | 85 |
| SduI | GDGCHC | 1 cut(s) | 457 |
| SetI | ASST | 1 cut(s) | 264 |
| SfaNI | GCATC | 1 cut(s) | 433 |
| SfcI | CTRYAG | 1 cut(s) | 289 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 187 |
| Sse9I | AATT | 2 cut(s) | 372, 389 |
| SsiI | CCGC | 1 cut(s) | 460 |
| SspMI | CTAG | 2 cut(s) | 348, 496 |
| StyD4I | CCNGG | 1 cut(s) | 83 |
| StyI | CCWWGG | 2 cut(s) | 17, 449 |
| TaaI | ACNGT | 2 cut(s) | 152, 305 |
| TaqI | TCGA | 4 cut(s) | 12, 69, 117, 354 |
| TasI | AATT | 2 cut(s) | 372, 389 |
| TfiI | GAWTC | 2 cut(s) | 46, 226 |
| Tru1I | TTAA | 2 cut(s) | 125, 330 |
| Tru9I | TTAA | 2 cut(s) | 125, 330 |
| TscAI | CASTG | 1 cut(s) | 316 |
| TspDTI | ATGAA | 1 cut(s) | 466 |
| TspGWI | ACGGA | 1 cut(s) | 270 |
| TspRI | CASTG | 1 cut(s) | 316 |
| XapI | RAATTY | 1 cut(s) | 372 |
| XceI | RCATGY | 1 cut(s) | 26 |
| XmiI | GTMKAC | 2 cut(s) | 69, 354 |
| XspI | CTAG | 2 cut(s) | 348, 496 |