RLG00000016873

Armadillo beta-catenin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0007695
Physical Location & Seq
Reverse (-)
10853660 .. 10855657
1998 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016873

Sequence Viewer

Length: 1998 bp
ATGGCGGACATAGTGAAGCAAATCCTGGCGAGGCCGATCCAGCTGGCGGACCAAGTGACCAAGGCGGCAGACGAGGCCAGCTCGTCCAAGCAGGACTGCGCCGAGCTGAAATCGAAGACGGAGAAGCTGGCGGGTCTGCTACGGCAGGCCGCCCGGGCCAGCTCCGACCTCTACGAGCGGCCGACGCGGCGGATCATCGACGAGACTGAGCAGGTGCTCGAGAAGGCTCTGTCTTTAGTCATGAAATGCCGCGCCAACGGGATAATGAAGCGGGTCTTCACCATAATCCCGGCGGCGCAGTTCCGGAAAATGTCGTCGCAGCTCGAGAATTCGATCGGCGACGTGTCGTGGCTGCTCAGAGTCTCGGCTCCCGCGGATGTCCGGGAAGATGGGTACTTGGGCCTGCCGCCAATCGCGGCCAACGAGCCCATTCTCGGCCTCATTTGGGAGCAGATCGCTATTCTCCACACCGGTTCGCTCGAAGACCGATCCGACGCGGCGGCGTCGCTGGTGTCTTTAGCCAAGGATAACGATAGGTATGGAAAGCTGATTATTGAAGAAGGAGGAGTTGGGCCCTTGTTAAAATTGATCAAAGAGGGAAAGGTTGAAGGCCAAGAGAACGCTGCTGAGGCTCTCGGGTTACTGGGCCGGGACCCTGAAAGCGTGGAGCACATGATCATTGCCGGAGTGTGCTCGGTGTTTTCGAAGATTCTGAAAGAAGGGCCGATGAAAGTTCAGGCGATGGTGGCGAAGGCGGTGGCGGAGCTAGCAGGGCATTACCCGAAATGCCAGGATCTGTTTGCGCAGCACAACATTATTCGATTGCTTGTGAGTCATCTTGCTTTCGAGACAGTCCAGGAGCATAGTAAGTATAGTGTGGCTTTTAACAAGGCCACATCGATTCATGCTGTTGTTGTGGCTACTAATAATTCTAATGCAAATAATAATCCGAAGGCGAATGAGGATGAGGAGAAGCAGAGTTATATGCAGATTCCTCATCCTTTGGGGAATCGGCAGCCGAGTCAGCTGCACACTCTGGTTACTACTACTATGGCAATGCAGGGAGGAGGAGGGACTAAGGCTCCTCTACAACCGGTTAATGGCGCTAATGGGGCGACCCAAATCAATCATACCAAGAGCAATAGCAGCAGCAATGTGAATCATCATTTATCCCATCATAATTCAGGAACAAGCGTAAAGGGAAGGGAATTGGAGGACCCTGCAACCAAGGCCAGTATGAAAGCCATGGCAGCACGAGCACTTGGGCGCCTAGCCAAGGGGAATTCCACCATTTGTCGTAGCATTACGGAATCAAGAGCGCTCTTGTGTTTTGCAGTGCTATTGGAAAAGGGCCTTGAAGATGTGCAGAAGAATTCTGCCATGGCGTTGATGGAGATAACAGGAGTGGCAGAGAAAGATGCCGAGTTGAGAAGATCAGCATTCAAGCCTAATTCCCCTGCCTGCAAGTCTGTCATTGATCAATTGCTAAAGATCATTGACAAGGCAGATTCGGACTCAGACCTCCTGATCCCCTGCATCAAAGCAGTTGGGAATTTGGCCAGGACATTTCGGGCAACGGAGACAAGGATCATTGGCCCATTGGTGCGCCTTCTGGATGAACGAGAAGCCGAGGTTACCAGGGAAGCCTCCATTGCCCTCACAAAGTTCGCCTGTACAGATAACTATCTTCACCTCGACCACTGCAAGGCAATAATAGACGCTGGAGGCGCCAAGCACTTAATCCAGCTCGTGTATTTTGGGGAACAAATGGTGCAGATTTCGGCTCTGGTTCTCATGTGCTACATTGCATTCCATGTACCGGACAGCGAAGAACTTGCCCAGGCTGAGGTGCTCACTGTGCTTGAATGGGCATCCAAGCAATCTTACATGACCCAAGATGAGACTCTTGACGCATTGTTACAAGAGGCTAAGAGTAGATTGGATCTTTACCAGTCCAGGGGCTCAAGGGGATACCATGGATTCAATCACAAAGCATAG

Protein Analysis

666

Amino Acids

72.41

Weight (kDa)

6.72

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 6 - 122 4.2e-54 Domain of unknown function (DUF7792)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc16I TGCGCA 1 cut(s) 804
Acc36I ACCTGC 1 cut(s) 202
AccB1I GGYRCC 2 cut(s) 1266, 1727
AccBSI CCGCTC 1 cut(s) 178
AccII CGCG 5 cut(s) 187, 252, 374, 416, 497
AccIII TCCGGA 1 cut(s) 303
AclWI GGATC 7 cut(s) 31, 200, 483, 801, 1522, 1595, 1950
AcoI YGGCCR 3 cut(s) 179, 417, 1557
AcsI RAATTY 4 cut(s) 328, 1282, 1372, 1552
AcyI GRCGYC 3 cut(s) 503, 1267, 1728
AfaI GTAC 3 cut(s) 395, 1675, 1818
AfeI AGCGCT 1 cut(s) 1320
AfiI CCNNNNNNNGG 9 cut(s) 46, 434, 445, 1100, 1276, 1705, 1819, 1846, 1957
AflIII ACRYGT 1 cut(s) 342
AgeI ACCGGT 2 cut(s) 470, 1093
AgsI TTSAA 6 cut(s) 557, 608, 1358, 1444, 1865, 1984
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 7 cut(s) 24, 789, 855, 1559, 1637, 1839, 1955
AjuI GAANNNNNNNTTGG 2 cut(s) 552, 584
Alw21I GWGCWC 5 cut(s) 219, 672, 695, 1261, 1854
Alw26I GTCTC 5 cut(s) 197, 367, 842, 1574, 1895
AlwI GGATC 7 cut(s) 31, 200, 483, 801, 1522, 1595, 1950
AlwNI CAGNNNCTG 1 cut(s) 796
Ama87I CYCGRG 4 cut(s) 153, 218, 323, 635
Aor13HI TCCGGA 1 cut(s) 303
Aor51HI AGCGCT 1 cut(s) 1320
ApaI GGGCCC 1 cut(s) 576
ApeKI GCWGC 9 cut(s) 319, 352, 623, 805, 1015, 1027, 1146, 1149, 1250
ApoI RAATTY 4 cut(s) 328, 1282, 1372, 1552
AsiGI ACCGGT 2 cut(s) 470, 1093
AspLEI GCGC 9 cut(s) 101, 254, 298, 805, 1106, 1269, 1321, 1608, 1730
AsuC2I CCSGG 5 cut(s) 154, 155, 290, 383, 650
AsuHPI GGTGA 2 cut(s) 271, 1682
AsuII TTCGAA 1 cut(s) 704
AsuNHI GCTAGC 1 cut(s) 766
AvaI CYCGRG 4 cut(s) 153, 218, 323, 635
AvaII GGWCC 3 cut(s) 49, 652, 1216
BaeGI GKGCMC 1 cut(s) 576
BalI TGGCCA 1 cut(s) 1559
BanI GGYRCC 2 cut(s) 1266, 1727
BanII GRGCYC 3 cut(s) 429, 576, 1964
BauI CACGAG 2 cut(s) 1254, 1748
BbsI GAAGAC 3 cut(s) 122, 268, 489
Bbv12I GWGCWC 5 cut(s) 219, 672, 695, 1261, 1854
BbvCI CCTCAGC 2 cut(s) 627, 1845
BbvI GCAGC 9 cut(s) 331, 339, 610, 817, 1014, 1027, 1158, 1161, 1262
BccI CCATC 4 cut(s) 383, 736, 1182, 1384
BceAI ACGGC 1 cut(s) 158
BcgI CGANNNNNNTGC 4 cut(s) 1009, 1043, 1817, 1851
BciT130I CCWGG 7 cut(s) 26, 791, 857, 1561, 1639, 1841, 1957
BciVI GTATCC 1 cut(s) 1964
BclI TGATCA 3 cut(s) 588, 675, 1477
BcnI CCSGG 5 cut(s) 154, 155, 290, 383, 650
BcoDI GTCTC 5 cut(s) 197, 367, 842, 1574, 1895
BfaI CTAG 2 cut(s) 767, 1271
BfoI RGCGCY 4 cut(s) 1107, 1270, 1322, 1731
BfuAI ACCTGC 1 cut(s) 202
BfuI GTATCC 1 cut(s) 1964
BglI GCCNNNNNGGC 2 cut(s) 155, 187
Bme18I GGWCC 3 cut(s) 49, 652, 1216
BmeT110I CYCGRG 4 cut(s) 153, 218, 323, 635
BmgBI CACGTC 1 cut(s) 343
BmiI GGNNCC 8 cut(s) 369, 574, 653, 654, 1083, 1218, 1268, 1729
BmrI ACTGGG 1 cut(s) 653
BmsI GCATC 3 cut(s) 1408, 1545, 1880
BmtI GCTAGC 1 cut(s) 770
BmuI ACTGGG 1 cut(s) 653
BpiI GAAGAC 3 cut(s) 122, 268, 489
BplI GAGNNNNNCTC 2 cut(s) 65, 97
BpmI CTGGAG 1 cut(s) 1743
Bpu10I CCTNAGC 2 cut(s) 627, 1845
Bpu14I TTCGAA 1 cut(s) 704
BpuEI CTTGAG 1 cut(s) 1948
BpuMI CCSGG 5 cut(s) 154, 155, 290, 383, 650
Bsa29I ATCGAT 1 cut(s) 899
BsaBI GATNNNNATC 1 cut(s) 1683
BsaHI GRCGYC 3 cut(s) 503, 1267, 1728
BsaWI WCCGGW 4 cut(s) 303, 470, 1093, 1819
BsaXI ACNNNNNCTCC 2 cut(s) 1066, 1096
Bsc4I CCNNNNNNNGG 9 cut(s) 46, 434, 445, 1100, 1276, 1705, 1819, 1846, 1957
Bse118I RCCGGY 2 cut(s) 470, 1093
Bse1I ACTGG 3 cut(s) 648, 1233, 1951
Bse3DI GCAATG 5 cut(s) 678, 1062, 1159, 1650, 1803
Bse8I GATNNNNATC 1 cut(s) 1683
BseAI TCCGGA 1 cut(s) 303
BseBI CCWGG 7 cut(s) 26, 791, 857, 1561, 1639, 1841, 1957
BseCI ATCGAT 1 cut(s) 899
BseGI GGATG 5 cut(s) 382, 970, 997, 1621, 1871
BseJI GATNNNNATC 1 cut(s) 1683
BseLI CCNNNNNNNGG 9 cut(s) 46, 434, 445, 1100, 1276, 1705, 1819, 1846, 1957
BseMI GCAATG 5 cut(s) 678, 1062, 1159, 1650, 1803
BseMII CTCAG 5 cut(s) 198, 370, 618, 1530, 1836
BseNI ACTGG 3 cut(s) 648, 1233, 1951
BseRI GAGGAG 5 cut(s) 579, 983, 1074, 1080, 1083
BseSI GKGCMC 1 cut(s) 576
BseX3I CGGCCG 1 cut(s) 179
BseXI GCAGC 9 cut(s) 331, 339, 610, 817, 1014, 1027, 1158, 1161, 1262
BsgI GTGCAG 3 cut(s) 1013, 1385, 1793
Bsh1236I CGCG 5 cut(s) 187, 252, 374, 416, 497
Bsh1285I CGRYCG 2 cut(s) 182, 336
BshNI GGYRCC 2 cut(s) 1266, 1727
BshTI ACCGGT 2 cut(s) 470, 1093
BshVI ATCGAT 1 cut(s) 899
BsiEI CGRYCG 2 cut(s) 182, 336
BsiHKAI GWGCWC 5 cut(s) 219, 672, 695, 1261, 1854
BsiHKCI CYCGRG 4 cut(s) 153, 218, 323, 635
BsiSI CCGG 9 cut(s) 154, 290, 304, 382, 471, 649, 684, 1094, 1820
BslFI GGGAC 2 cut(s) 665, 1087
BslI CCNNNNNNNGG 9 cut(s) 46, 434, 445, 1100, 1276, 1705, 1819, 1846, 1957
BsmAI GTCTC 5 cut(s) 197, 367, 842, 1574, 1895
BsmFI GGGAC 2 cut(s) 665, 1087
BsmI GAATGC 2 cut(s) 1439, 1808
BsoBI CYCGRG 4 cut(s) 153, 218, 323, 635
Bsp119I TTCGAA 1 cut(s) 704
Bsp120I GGGCCC 1 cut(s) 572
Bsp1286I GDGCHC 8 cut(s) 219, 429, 576, 672, 695, 1261, 1854, 1964
Bsp13I TCCGGA 1 cut(s) 303
Bsp1407I TGTACA 1 cut(s) 1673
Bsp19I CCATGG 3 cut(s) 1245, 1380, 1975
BspCNI CTCAG 5 cut(s) 199, 369, 619, 1529, 1837
BspDI ATCGAT 1 cut(s) 899
BspEI TCCGGA 1 cut(s) 303
BspFNI CGCG 5 cut(s) 187, 252, 374, 416, 497
BspHI TCATGA 1 cut(s) 240
BspLI GGNNCC 8 cut(s) 369, 574, 653, 654, 1083, 1218, 1268, 1729
BspMI ACCTGC 1 cut(s) 202
BspOI GCTAGC 1 cut(s) 770
BspPI GGATC 7 cut(s) 31, 200, 483, 801, 1522, 1595, 1950
BspT104I TTCGAA 1 cut(s) 704
BspT107I GGYRCC 2 cut(s) 1266, 1727
BsrBI CCGCTC 1 cut(s) 178
BsrDI GCAATG 5 cut(s) 678, 1062, 1159, 1650, 1803
BsrFI RCCGGY 2 cut(s) 470, 1093
BsrGI TGTACA 1 cut(s) 1673
BsrI ACTGG 3 cut(s) 648, 1233, 1951
BssAI RCCGGY 2 cut(s) 470, 1093
BssNI GRCGYC 3 cut(s) 503, 1267, 1728
BssSI CACGAG 2 cut(s) 1254, 1748
BssT1I CCWWGG 7 cut(s) 60, 522, 1227, 1245, 1275, 1380, 1975
Bst2BI CACGAG 2 cut(s) 1254, 1748
Bst2UI CCWGG 7 cut(s) 26, 791, 857, 1561, 1639, 1841, 1957
Bst4CI ACNGT 2 cut(s) 853, 1858
BstACI GRCGYC 3 cut(s) 503, 1267, 1728
BstAUI TGTACA 1 cut(s) 1673
BstBI TTCGAA 1 cut(s) 704
BstC8I GCNNGC 8 cut(s) 45, 79, 129, 147, 160, 404, 768, 1462
BstDEI CTNAG 7 cut(s) 207, 356, 627, 1077, 1516, 1845, 1929
BstDSI CCRYGG 4 cut(s) 372, 1245, 1380, 1975
BstEII GGTNACC 1 cut(s) 1633
BstENI CCTNNNNNAGG 1 cut(s) 1274
BstF5I GGATG 5 cut(s) 382, 970, 997, 1621, 1871
BstFNI CGCG 5 cut(s) 187, 252, 374, 416, 497
BstH2I RGCGCY 4 cut(s) 1107, 1270, 1322, 1731
BstHHI GCGC 9 cut(s) 101, 254, 298, 805, 1106, 1269, 1321, 1608, 1730
BstMAI GTCTC 5 cut(s) 197, 367, 842, 1574, 1895
BstMCI CGRYCG 2 cut(s) 182, 336
BstNI CCWGG 7 cut(s) 26, 791, 857, 1561, 1639, 1841, 1957
BstPI GGTNACC 1 cut(s) 1633
BstSLI GKGCMC 1 cut(s) 576
BstUI CGCG 5 cut(s) 187, 252, 374, 416, 497
BstV1I GCAGC 9 cut(s) 331, 339, 610, 817, 1014, 1027, 1158, 1161, 1262
BstV2I GAAGAC 3 cut(s) 122, 268, 489
BstX2I RGATCY 2 cut(s) 793, 1942
BstYI RGATCY 2 cut(s) 793, 1942
BstZI CGGCCG 1 cut(s) 179
Bsu15I ATCGAT 1 cut(s) 899
BsuI GTATCC 1 cut(s) 1964
BsuTUI ATCGAT 1 cut(s) 899
BtgI CCRYGG 4 cut(s) 372, 1245, 1380, 1975
BtgZI GCGATG 1 cut(s) 755
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 5 cut(s) 382, 970, 997, 1621, 1871
BtsI GCAGTG 2 cut(s) 1341, 1699
BtsIMutI CAGTG 3 cut(s) 1341, 1699, 1854
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 8 cut(s) 45, 79, 129, 147, 160, 404, 768, 1462
CaiI CAGNNNCTG 1 cut(s) 796
CciI TCATGA 1 cut(s) 240
CfoI GCGC 9 cut(s) 101, 254, 298, 805, 1106, 1269, 1321, 1608, 1730
Cfr10I RCCGGY 2 cut(s) 470, 1093
Cfr42I CCGCGG 1 cut(s) 375
Cfr9I CCCGGG 1 cut(s) 153
ClaI ATCGAT 1 cut(s) 899
CseI GACGC 5 cut(s) 193, 492, 503, 1727, 1919
Csp6I GTAC 3 cut(s) 394, 1674, 1817
CspAI ACCGGT 2 cut(s) 470, 1093
CviAII CATG 9 cut(s) 241, 673, 905, 1246, 1381, 1795, 1814, 1888, 1976
CviQI GTAC 3 cut(s) 394, 1674, 1817
DdeI CTNAG 7 cut(s) 207, 356, 627, 1077, 1516, 1845, 1929
DinI GGCGCC 2 cut(s) 1268, 1729
EaeI YGGCCR 3 cut(s) 179, 417, 1557
EagI CGGCCG 1 cut(s) 179
EciI GGCGGA 4 cut(s) 20, 62, 205, 776
EclXI CGGCCG 1 cut(s) 179
Eco130I CCWWGG 7 cut(s) 60, 522, 1227, 1245, 1275, 1380, 1975
Eco24I GRGCYC 3 cut(s) 429, 576, 1964
Eco47I GGWCC 3 cut(s) 49, 652, 1216
Eco47III AGCGCT 1 cut(s) 1320
Eco52I CGGCCG 1 cut(s) 179
Eco88I CYCGRG 4 cut(s) 153, 218, 323, 635
Eco91I GGTNACC 1 cut(s) 1633
EcoNI CCTNNNNNAGG 1 cut(s) 1274
EcoO109I RGGNCCY 4 cut(s) 573, 652, 1216, 1351
EcoO65I GGTNACC 1 cut(s) 1633
EcoRI GAATTC 3 cut(s) 328, 1282, 1372
EcoRII CCWGG 7 cut(s) 24, 789, 855, 1559, 1637, 1839, 1955
EcoT14I CCWWGG 7 cut(s) 60, 522, 1227, 1245, 1275, 1380, 1975
EcoT38I GRGCYC 3 cut(s) 429, 576, 1964
EgeI GGCGCC 2 cut(s) 1268, 1729
EheI GGCGCC 2 cut(s) 1268, 1729
ErhI CCWWGG 7 cut(s) 60, 522, 1227, 1245, 1275, 1380, 1975
FaeI CATG 9 cut(s) 244, 676, 908, 1249, 1384, 1798, 1817, 1891, 1979
FalI AAGNNNNNCTT 2 cut(s) 260, 292
FaqI GGGAC 2 cut(s) 665, 1087
FatI CATG 9 cut(s) 240, 672, 904, 1245, 1380, 1794, 1813, 1887, 1975
FauI CCCGC 3 cut(s) 124, 264, 379
FbaI TGATCA 3 cut(s) 588, 675, 1477
FokI GGATG 5 cut(s) 389, 977, 984, 1628, 1858
FriOI GRGCYC 3 cut(s) 429, 576, 1964
FspBI CTAG 2 cut(s) 767, 1271
FspI TGCGCA 1 cut(s) 804
GlaI GCGC 9 cut(s) 100, 253, 297, 804, 1105, 1268, 1320, 1607, 1729
GsuI CTGGAG 1 cut(s) 1743
HaeII RGCGCY 4 cut(s) 1107, 1270, 1322, 1731
HapII CCGG 9 cut(s) 154, 290, 304, 382, 471, 649, 684, 1094, 1820
HgaI GACGC 5 cut(s) 193, 492, 503, 1727, 1919
HhaI GCGC 9 cut(s) 101, 254, 298, 805, 1106, 1269, 1321, 1608, 1730
Hin1I GRCGYC 3 cut(s) 503, 1267, 1728
Hin1II CATG 9 cut(s) 244, 676, 908, 1249, 1384, 1798, 1817, 1891, 1979
Hin6I GCGC 9 cut(s) 99, 252, 296, 803, 1104, 1267, 1319, 1606, 1728
HinP1I GCGC 9 cut(s) 99, 252, 296, 803, 1104, 1267, 1319, 1606, 1728
HpaII CCGG 9 cut(s) 154, 290, 304, 382, 471, 649, 684, 1094, 1820
HphI GGTGA 2 cut(s) 271, 1682
Hpy188I TCNGA 7 cut(s) 166, 359, 493, 714, 951, 1513, 1519
Hpy99I CGWCG 6 cut(s) 187, 203, 319, 344, 497, 508
HpyAV CCTTC 8 cut(s) 217, 554, 602, 713, 745, 946, 1197, 1619
HpyCH4III ACNGT 2 cut(s) 853, 1858
HpyCH4IV ACGT 1 cut(s) 342
HpyF3I CTNAG 7 cut(s) 207, 356, 627, 1077, 1516, 1845, 1929
HpySE526I ACGT 1 cut(s) 342
Hsp92I GRCGYC 3 cut(s) 503, 1267, 1728
Hsp92II CATG 9 cut(s) 244, 676, 908, 1249, 1384, 1798, 1817, 1891, 1979
HspAI GCGC 9 cut(s) 99, 252, 296, 803, 1104, 1267, 1319, 1606, 1728
KasI GGCGCC 2 cut(s) 1266, 1727
KflI GGGWCCC 1 cut(s) 652
Kpn2I TCCGGA 1 cut(s) 303
Ksp22I TGATCA 3 cut(s) 588, 675, 1477
KspI CCGCGG 1 cut(s) 375
LmnI GCTCC 7 cut(s) 167, 373, 448, 667, 763, 859, 1087
Lsp1109I GCAGC 9 cut(s) 331, 339, 610, 817, 1014, 1027, 1158, 1161, 1262
LweI GCATC 3 cut(s) 1408, 1545, 1880
MaeI CTAG 2 cut(s) 767, 1271
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 5 cut(s) 55, 639, 1039, 1633, 1917
MbiI CCGCTC 1 cut(s) 178
MfeI CAATTG 1 cut(s) 1481
MflI RGATCY 2 cut(s) 793, 1942
MhlI GDGCHC 8 cut(s) 219, 429, 576, 672, 695, 1261, 1854, 1964
MlsI TGGCCA 1 cut(s) 1559
MluNI TGGCCA 1 cut(s) 1559
Mly113I GGCGCC 2 cut(s) 1267, 1728
MlyI GAGTC 5 cut(s) 369, 841, 1030, 1508, 1897
MmeI TCCRAC 2 cut(s) 189, 516
Mox20I TGGCCA 1 cut(s) 1559
MroI TCCGGA 1 cut(s) 303
MscI TGGCCA 1 cut(s) 1559
MseI TTAA 4 cut(s) 581, 885, 1098, 1739
Msp20I TGGCCA 1 cut(s) 1559
MspA1I CMGCKG 3 cut(s) 43, 374, 1027
MspI CCGG 9 cut(s) 154, 290, 304, 382, 471, 649, 684, 1094, 1820
MunI CAATTG 1 cut(s) 1481
Mva1269I GAATGC 2 cut(s) 1439, 1808
MvaI CCWGG 7 cut(s) 26, 791, 857, 1561, 1639, 1841, 1957
MvnI CGCG 5 cut(s) 187, 252, 374, 416, 497
NarI GGCGCC 2 cut(s) 1267, 1728
NciI CCSGG 5 cut(s) 154, 155, 290, 383, 650
NcoI CCATGG 3 cut(s) 1245, 1380, 1975
NheI GCTAGC 1 cut(s) 766
NlaIII CATG 9 cut(s) 244, 676, 908, 1249, 1384, 1798, 1817, 1891, 1979
NlaIV GGNNCC 8 cut(s) 369, 574, 653, 654, 1083, 1218, 1268, 1729
NmeAIII GCCGAG 6 cut(s) 127, 344, 414, 1044, 1447, 1654
NmuCI GTSAC 1 cut(s) 55
NsbI TGCGCA 1 cut(s) 804
NspV TTCGAA 1 cut(s) 704
PaeR7I CTCGAG 2 cut(s) 218, 323
PagI TCATGA 1 cut(s) 240
PaqCI CACCTGC 1 cut(s) 202
PcsI WCGNNNNNNNCGW 2 cut(s) 420, 701
PctI GAATGC 2 cut(s) 1439, 1808
PfeI GAWTC 8 cut(s) 709, 901, 991, 1009, 1159, 1310, 1508, 1980
PfoI TCCNGGA 2 cut(s) 381, 855
PinAI ACCGGT 2 cut(s) 470, 1093
Ple19I CGATCG 1 cut(s) 336
PleI GAGTC 5 cut(s) 368, 840, 1029, 1508, 1897
PluTI GGCGCC 2 cut(s) 1270, 1731
PpsI GAGTC 5 cut(s) 368, 840, 1029, 1508, 1897
PpuMI RGGWCCY 2 cut(s) 652, 1216
Psp5II RGGWCCY 2 cut(s) 652, 1216
Psp6I CCWGG 7 cut(s) 24, 789, 855, 1559, 1637, 1839, 1955
PspEI GGTNACC 1 cut(s) 1633
PspGI CCWGG 7 cut(s) 24, 789, 855, 1559, 1637, 1839, 1955
PspN4I GGNNCC 8 cut(s) 369, 574, 653, 654, 1083, 1218, 1268, 1729
PspOMI GGGCCC 1 cut(s) 572
PspPPI RGGWCCY 2 cut(s) 652, 1216
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 2 cut(s) 793, 1942
PvuI CGATCG 1 cut(s) 336
PvuII CAGCTG 2 cut(s) 43, 1027
RsaI GTAC 3 cut(s) 395, 1675, 1818
RsaNI GTAC 3 cut(s) 394, 1674, 1817
SacII CCGCGG 1 cut(s) 375
SaqAI TTAA 4 cut(s) 581, 885, 1098, 1739
SchI GAGTC 5 cut(s) 369, 841, 1030, 1508, 1897
SduI GDGCHC 8 cut(s) 219, 429, 576, 672, 695, 1261, 1854, 1964
SfaNI GCATC 3 cut(s) 1408, 1545, 1880
SfiI GGCCNNNNNGGCC 1 cut(s) 155
SfoI GGCGCC 2 cut(s) 1268, 1729
Sfr274I CTCGAG 2 cut(s) 218, 323
Sfr303I CCGCGG 1 cut(s) 375
SfuI TTCGAA 1 cut(s) 704
SgrBI CCGCGG 1 cut(s) 375
SinI GGWCC 3 cut(s) 49, 652, 1216
SlaI CTCGAG 2 cut(s) 218, 323
SmaI CCCGGG 1 cut(s) 155
SmlI CTYRAG 3 cut(s) 218, 323, 1963
SmoI CTYRAG 3 cut(s) 218, 323, 1963
SrfI GCCCGGGC 1 cut(s) 155
SspDI GGCGCC 2 cut(s) 1266, 1727
SspMI CTAG 2 cut(s) 767, 1271
StyI CCWWGG 7 cut(s) 60, 522, 1227, 1245, 1275, 1380, 1975
TaaI ACNGT 2 cut(s) 853, 1858
TaiI ACGT 1 cut(s) 345
TaqII GACCGA 1 cut(s) 501
TatI WGTACW 1 cut(s) 1673
TfiI GAWTC 8 cut(s) 709, 901, 991, 1009, 1159, 1310, 1508, 1980
Tru1I TTAA 4 cut(s) 581, 885, 1098, 1739
Tru9I TTAA 4 cut(s) 581, 885, 1098, 1739
TscAI CASTG 3 cut(s) 1341, 1706, 1861
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 9 cut(s) 319, 352, 623, 805, 1015, 1027, 1146, 1149, 1250
Tsp45I GTSAC 1 cut(s) 55
TspDTI ATGAA 6 cut(s) 257, 281, 743, 893, 1253, 1632
TspGWI ACGGA 3 cut(s) 134, 1322, 1592
TspMI CCCGGG 1 cut(s) 153
TspRI CASTG 3 cut(s) 1341, 1706, 1861
VpaK11BI GGWCC 3 cut(s) 49, 652, 1216
XagI CCTNNNNNAGG 1 cut(s) 1274
XapI RAATTY 4 cut(s) 328, 1282, 1372, 1552
XcmI CCANNNNNNNNNTGG 1 cut(s) 1387
XhoI CTCGAG 2 cut(s) 218, 323
XmaI CCCGGG 1 cut(s) 153
XspI CTAG 2 cut(s) 767, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.