Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002785.1

Orthogroup ID

OG0007695

Physical Location & Seq

Genomic Coordinates Forward (+)

26511 .. 30599

Gene Structure 4089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002785.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

atggctgatagaggtctattggggggcaatacatggctgatagtcttatattggggggcaatagaggtctattgggggcaaaaaaacatttccggtgagattttcagcaaattccggtgggcggcggcccgcgacaggaatccggcgaaagttggccggaatccggcgaccggtgacaggtatccagcgaaaattggccggaatctggtgaccggaatccggcgacaggggacaggattccgcggccgattttggtccgccgtgccggccatggcggacatagtgaagcaaatcctggcgaggccgatccagctggcggaccaagtgaccaaggcggcagacgaggccagctcgtccaagcaggactgcgccgagctgaaatcgaagacggagaagctggcgggtctgctacggcaggccgcccgggccagctccgacctctacgagcggccgacgcggcggatcatcgacgagactgagcaggtgctcgagaaggctctgtctttagtcctgaaatgccgcgccaacgggataatgaagcgggtcttcaccataatcccggcggcgcagttccggaaaatgtcgtcgcagctcgagaattcgatcggcgacgtgtcgtggctgctcagagtctcggctcccgcggatatccgggaagatgggtacttgggcctgccgccaatcgcggccaacgagcccattctcggcctcatttgggagcagatcgctattctccacaccggttcgctcgaaggccgatccgacgcggcggcgtctctggtttctttagccaaggataacgataggtatggaaagctgattattgaagaaggaggagttgggccgttgttaaaattgatcaaagagggaaaggttgaaggccaagagaacgctgctgaggctctcgggttactgggccgggaccctgaaagcgtcgagcacatgatcattgccggagtgtgctccgtgttttccaagattctgaaagaagggccgatgaaagttcaggccatggtggccaaggcggtcgcggagctagcagggcattacccgaaatgccaggatctgtttgcgcagcacaacatcattcgattgcttgtgagtcatcttgctttcgagacagtccaggagcatagtaagtatagtgtgacttttaacaaggccacatcgattcatgctcttgttgtcgctactaataattctaatgcaaataataatccgaccaaggcgaatgaggatgaggagaagcagagttatatgcagattcctcatcctttggggaatcggcagccgagtcagctgcacactgtggttactactactatggcaatgcagggaggaggagggactaaggctcctctacaaccggttaatggcgctaatggggccacccaaatcagtcataccaagagcaatagcagcagcaatgtgaatcatcatttatcccatcctaattcaggaacaagcgttaagggaagggaattagaggaccctgcaaccaaggccagtatgaaagcgatggcagcacgagcacttgggcacctagccaaggggaattccaccatttgtcgtagcattacggaatcaagagcgctcttgtgttttgcagtgctattggaaaagggtcttgaagatgtgcagaagaattctgccatggcgttgatggagataacaggagtggcagagaaagatgctgagttgagaagatccgcattcaagcctaattcccctgcctgcaagtctgtcattgatcaattgctaaagatcattgacaaggcagattcggactcagacctcctgatcccctgcatcaaagcagtagggaatttggccaggacatttcgggcaacggagacaaggatcattggcccattggtgcgccttctggatgaacgagaagccgaggttaccagggaagcctccattgccctcacaaagttcgcctgtacagataactatcttcacctcgaccactgcaaggcaataatagatgctggaggcgccaagcacttaatccagctcgtgtattttggggaacacatggtgcagatttcggctctggttctcatgtgctacattgccttccatgtaccggacagcgaagaacttgcccaggctgaggtgctcactgtgcttgaatgggcatccaagcaatcttacatgacccaagatgagactcttgacacattgttacaagaggctaagagtagattggatctttaccagtccaggggctcaaggggataccatggattcaatcacaaagcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000011 GO:0000322 GO:0000323 GO:0000324 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006996 GO:0007033 GO:0008150 GO:0009607 GO:0009987 GO:0016043 GO:0030447 GO:0030448 GO:0036180 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044182 GO:0044424 GO:0044444 GO:0044464 GO:0048308 GO:0050896 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

756

Amino Acids

82.48

Weight (kDa)

8.65

Isoelectric Point (pI)

36.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007695)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36030 AT5G66200
fragaria_vesca	FvH4_1g11750
malus_domestica	MD02G1131200.v1.1 MD02G1131400.v1.1 MD15G1244600.v1.1
prunus_persica	Prupe.7G168800_v2.0.a1 Prupe.7G168900_v2.0.a1 Prupe.7G169100_v2.0.a1 Prupe.7G170400_v2.0.a1
pyrus_communis	pycom02g10260 pycom15g21540
rosa_chinensis	RchiOBHm_Chr2g0099341
rosa_laevigata	RLG00000016873 RLG00000036660
rosa_multiflora	Rmu_sc0002785.1_g000007 Rmu_sc0012901.1_g000004
rosa_roxburghii	Rroxscaffold_2G00143190
rosa_rugosa	Rorug02G0078800
rosa_samantha	Rh2AG128600 Rh2BG131400 Rh2CG132400 Rh2DG132800
rosa_wichuraiana	Rw2G009910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	472
Acc16I	TGCGCA	1 cut(s)	1074
Acc36I	ACCTGC	1 cut(s)	472
AccB1I	GGYRCC	2 cut(s)	1539, 2000
AccBSI	CCGCTC	1 cut(s)	448
AccII	CGCG	8 cut(s)	132, 243, 457, 522, 644, 686, 767, 1031
AccIII	TCCGGA	1 cut(s)	573
AclWI	GGATC	8 cut(s)	301, 470, 753, 1071, 1701, 1795, 1868, 2223
AcoI	YGGCCR	8 cut(s)	154, 196, 244, 267, 449, 687, 1017, 1830
AcsI	RAATTY	5 cut(s)	110, 598, 1555, 1645, 1825
AcyI	GRCGYC	2 cut(s)	773, 2001
AdeI	CACNNNGTG	2 cut(s)	1309, 2044
AfaI	GTAC	3 cut(s)	665, 1948, 2091
AfeI	AGCGCT	1 cut(s)	1593
AflIII	ACRYGT	1 cut(s)	612
AgeI	ACCGGT	3 cut(s)	170, 740, 1366
AgsI	TTSAA	6 cut(s)	827, 878, 1631, 1717, 2138, 2257
AjiI	CACGTC	1 cut(s)	613
AjnI	CCWGG	7 cut(s)	294, 1059, 1125, 1832, 1910, 2112, 2228
AjuI	GAANNNNNNNTTGG	2 cut(s)	822, 854
Alw21I	GWGCWC	5 cut(s)	489, 942, 965, 1534, 2127
Alw26I	GTCTC	6 cut(s)	467, 637, 780, 1112, 1847, 2168
AlwI	GGATC	8 cut(s)	301, 470, 753, 1071, 1701, 1795, 1868, 2223
AlwNI	CAGNNNCTG	1 cut(s)	1066
Ama87I	CYCGRG	4 cut(s)	423, 488, 593, 905
Aor13HI	TCCGGA	1 cut(s)	573
Aor51HI	AGCGCT	1 cut(s)	1593
ApeKI	GCWGC	9 cut(s)	589, 622, 893, 1075, 1288, 1300, 1419, 1422, 1523
ApoI	RAATTY	5 cut(s)	110, 598, 1555, 1645, 1825
AsiGI	ACCGGT	3 cut(s)	170, 740, 1366
AspLEI	GCGC	8 cut(s)	371, 524, 568, 1075, 1379, 1594, 1881, 2003
AsuC2I	CCSGG	5 cut(s)	424, 425, 560, 653, 920
AsuHPI	GGTGA	5 cut(s)	107, 185, 220, 541, 1955
AsuNHI	GCTAGC	1 cut(s)	1036
AvaI	CYCGRG	4 cut(s)	423, 488, 593, 905
AvaII	GGWCC	4 cut(s)	255, 319, 922, 1489
BaeGI	GKGCMC	1 cut(s)	1542
BalI	TGGCCA	2 cut(s)	1019, 1832
BanI	GGYRCC	2 cut(s)	1539, 2000
BanII	GRGCYC	2 cut(s)	699, 2237
BauI	CACGAG	2 cut(s)	1527, 2021
BbsI	GAAGAC	2 cut(s)	392, 538
Bbv12I	GWGCWC	5 cut(s)	489, 942, 965, 1534, 2127
BbvCI	CCTCAGC	2 cut(s)	897, 2118
BbvI	GCAGC	9 cut(s)	601, 609, 880, 1087, 1287, 1300, 1431, 1434, 1535
BccI	CCATC	4 cut(s)	653, 1455, 1513, 1657
BceAI	ACGGC	3 cut(s)	245, 428, 829
BcgI	CGANNNNNNTGC	4 cut(s)	1282, 1316, 2090, 2124
BciT130I	CCWGG	7 cut(s)	296, 1061, 1127, 1834, 1912, 2114, 2230
BciVI	GTATCC	2 cut(s)	192, 2237
BclI	TGATCA	3 cut(s)	858, 945, 1750
BcnI	CCSGG	5 cut(s)	424, 425, 560, 653, 920
BcoDI	GTCTC	6 cut(s)	467, 637, 780, 1112, 1847, 2168
BfaI	CTAG	2 cut(s)	1037, 1544
BfoI	RGCGCY	3 cut(s)	1380, 1595, 2004
BfuAI	ACCTGC	1 cut(s)	472
BfuI	GTATCC	2 cut(s)	192, 2237
BglI	GCCNNNNNGGC	4 cut(s)	266, 425, 457, 1016
Bme18I	GGWCC	4 cut(s)	255, 319, 922, 1489
BmeT110I	CYCGRG	4 cut(s)	423, 488, 593, 905
BmgBI	CACGTC	1 cut(s)	613
BmiI	GGNNCC	8 cut(s)	639, 923, 924, 1356, 1387, 1491, 1541, 2002
BmrI	ACTGGG	1 cut(s)	923
BmsI	GCATC	4 cut(s)	1681, 1818, 1981, 2153
BmtI	GCTAGC	1 cut(s)	1040
BmuI	ACTGGG	1 cut(s)	923
BpiI	GAAGAC	2 cut(s)	392, 538
BplI	GAGNNNNNCTC	2 cut(s)	335, 367
BpmI	CTGGAG	1 cut(s)	2016
Bpu10I	CCTNAGC	2 cut(s)	897, 2118
BpuEI	CTTGAG	1 cut(s)	2221
BpuMI	CCSGG	5 cut(s)	424, 425, 560, 653, 920
Bsa29I	ATCGAT	1 cut(s)	1169
BsaBI	GATNNNNATC	1 cut(s)	1956
BsaHI	GRCGYC	2 cut(s)	773, 2001
BsaWI	WCCGGW	8 cut(s)	92, 114, 170, 212, 573, 740, 1366, 2092
BsaXI	ACNNNNNCTCC	2 cut(s)	1339, 1369
Bse118I	RCCGGY	4 cut(s)	170, 265, 740, 1366
Bse1I	ACTGG	3 cut(s)	918, 1506, 2224
Bse3DI	GCAATG	5 cut(s)	948, 1335, 1432, 1923, 2076
Bse8I	GATNNNNATC	1 cut(s)	1956
BseAI	TCCGGA	1 cut(s)	573
BseBI	CCWGG	7 cut(s)	296, 1061, 1127, 1834, 1912, 2114, 2230
BseCI	ATCGAT	1 cut(s)	1169
BseGI	GGATG	5 cut(s)	1243, 1270, 1447, 1894, 2144
BseJI	GATNNNNATC	1 cut(s)	1956
BseMI	GCAATG	5 cut(s)	948, 1335, 1432, 1923, 2076
BseMII	CTCAG	6 cut(s)	468, 640, 888, 1686, 1803, 2109
BseNI	ACTGG	3 cut(s)	918, 1506, 2224
BseRI	GAGGAG	5 cut(s)	849, 1256, 1347, 1353, 1356
BseSI	GKGCMC	1 cut(s)	1542
BseX3I	CGGCCG	2 cut(s)	244, 449
BseXI	GCAGC	9 cut(s)	601, 609, 880, 1087, 1287, 1300, 1431, 1434, 1535
BsgI	GTGCAG	3 cut(s)	1286, 1658, 2066
Bsh1236I	CGCG	8 cut(s)	132, 243, 457, 522, 644, 686, 767, 1031
Bsh1285I	CGRYCG	5 cut(s)	171, 247, 452, 606, 1029
BshNI	GGYRCC	2 cut(s)	1539, 2000
BshTI	ACCGGT	3 cut(s)	170, 740, 1366
BshVI	ATCGAT	1 cut(s)	1169
BsiEI	CGRYCG	5 cut(s)	171, 247, 452, 606, 1029
BsiHKAI	GWGCWC	5 cut(s)	489, 942, 965, 1534, 2127
BsiHKCI	CYCGRG	4 cut(s)	423, 488, 593, 905
BslFI	GGGAC	3 cut(s)	244, 935, 1360
BsmAI	GTCTC	6 cut(s)	467, 637, 780, 1112, 1847, 2168
BsmBI	CGTCTC	1 cut(s)	780
BsmFI	GGGAC	3 cut(s)	244, 935, 1360
BsmI	GAATGC	1 cut(s)	1712
BsoBI	CYCGRG	4 cut(s)	423, 488, 593, 905
Bsp1286I	GDGCHC	8 cut(s)	489, 699, 942, 965, 1534, 1542, 2127, 2237
Bsp13I	TCCGGA	1 cut(s)	573
Bsp1407I	TGTACA	1 cut(s)	1946
Bsp19I	CCATGG	4 cut(s)	270, 1011, 1653, 2248
BspCNI	CTCAG	6 cut(s)	469, 639, 889, 1687, 1802, 2110
BspDI	ATCGAT	1 cut(s)	1169
BspEI	TCCGGA	1 cut(s)	573
BspFNI	CGCG	8 cut(s)	132, 243, 457, 522, 644, 686, 767, 1031
BspLI	GGNNCC	8 cut(s)	639, 923, 924, 1356, 1387, 1491, 1541, 2002
BspMI	ACCTGC	1 cut(s)	472
BspOI	GCTAGC	1 cut(s)	1040
BspPI	GGATC	8 cut(s)	301, 470, 753, 1071, 1701, 1795, 1868, 2223
BspT107I	GGYRCC	2 cut(s)	1539, 2000
BsrBI	CCGCTC	1 cut(s)	448
BsrDI	GCAATG	5 cut(s)	948, 1335, 1432, 1923, 2076
BsrFI	RCCGGY	4 cut(s)	170, 265, 740, 1366
BsrGI	TGTACA	1 cut(s)	1946
BsrI	ACTGG	3 cut(s)	918, 1506, 2224
BssAI	RCCGGY	4 cut(s)	170, 265, 740, 1366
BssNI	GRCGYC	2 cut(s)	773, 2001
BssSI	CACGAG	2 cut(s)	1527, 2021
Bst2BI	CACGAG	2 cut(s)	1527, 2021
Bst2UI	CCWGG	7 cut(s)	296, 1061, 1127, 1834, 1912, 2114, 2230
Bst4CI	ACNGT	3 cut(s)	1123, 1309, 2131
BstACI	GRCGYC	2 cut(s)	773, 2001
BstAUI	TGTACA	1 cut(s)	1946
BstDEI	CTNAG	8 cut(s)	477, 626, 897, 1350, 1695, 1789, 2118, 2202
BstDSI	CCRYGG	6 cut(s)	241, 270, 642, 1011, 1653, 2248
BstEII	GGTNACC	2 cut(s)	208, 1906
BstENI	CCTNNNNNAGG	2 cut(s)	1455, 1547
BstF5I	GGATG	5 cut(s)	1243, 1270, 1447, 1894, 2144
BstFNI	CGCG	8 cut(s)	132, 243, 457, 522, 644, 686, 767, 1031
BstH2I	RGCGCY	3 cut(s)	1380, 1595, 2004
BstHHI	GCGC	8 cut(s)	371, 524, 568, 1075, 1379, 1594, 1881, 2003
BstMAI	GTCTC	6 cut(s)	467, 637, 780, 1112, 1847, 2168
BstMCI	CGRYCG	5 cut(s)	171, 247, 452, 606, 1029
BstNI	CCWGG	7 cut(s)	296, 1061, 1127, 1834, 1912, 2114, 2230
BstPI	GGTNACC	2 cut(s)	208, 1906
BstSLI	GKGCMC	1 cut(s)	1542
BstUI	CGCG	8 cut(s)	132, 243, 457, 522, 644, 686, 767, 1031
BstV1I	GCAGC	9 cut(s)	601, 609, 880, 1087, 1287, 1300, 1431, 1434, 1535
BstV2I	GAAGAC	2 cut(s)	392, 538
BstX2I	RGATCY	3 cut(s)	1063, 1706, 2215
BstYI	RGATCY	3 cut(s)	1063, 1706, 2215
BstZI	CGGCCG	2 cut(s)	244, 449
Bsu15I	ATCGAT	1 cut(s)	1169
BsuI	GTATCC	2 cut(s)	192, 2237
BsuTUI	ATCGAT	1 cut(s)	1169
BtgI	CCRYGG	6 cut(s)	241, 270, 642, 1011, 1653, 2248
BtgZI	GCGATG	1 cut(s)	1532
BtrI	CACGTC	1 cut(s)	613
BtsCI	GGATG	5 cut(s)	1243, 1270, 1447, 1894, 2144
BtsI	GCAGTG	2 cut(s)	1614, 1972
BtsIMutI	CAGTG	4 cut(s)	1305, 1614, 1972, 2127
BveI	ACCTGC	1 cut(s)	472
CaiI	CAGNNNCTG	1 cut(s)	1066
CfoI	GCGC	8 cut(s)	371, 524, 568, 1075, 1379, 1594, 1881, 2003
Cfr10I	RCCGGY	4 cut(s)	170, 265, 740, 1366
Cfr42I	CCGCGG	2 cut(s)	244, 645
Cfr9I	CCCGGG	1 cut(s)	423
ClaI	ATCGAT	1 cut(s)	1169
CseI	GACGC	4 cut(s)	463, 762, 773, 922
Csp6I	GTAC	3 cut(s)	664, 1947, 2090
CspAI	ACCGGT	3 cut(s)	170, 740, 1366
CviQI	GTAC	3 cut(s)	664, 1947, 2090
DdeI	CTNAG	8 cut(s)	477, 626, 897, 1350, 1695, 1789, 2118, 2202
DinI	GGCGCC	1 cut(s)	2002
DraIII	CACNNNGTG	2 cut(s)	1309, 2044
EaeI	YGGCCR	8 cut(s)	154, 196, 244, 267, 449, 687, 1017, 1830
EagI	CGGCCG	2 cut(s)	244, 449
EciI	GGCGGA	4 cut(s)	247, 290, 332, 475
EclXI	CGGCCG	2 cut(s)	244, 449
Eco24I	GRGCYC	2 cut(s)	699, 2237
Eco32I	GATATC	1 cut(s)	649
Eco47I	GGWCC	4 cut(s)	255, 319, 922, 1489
Eco47III	AGCGCT	1 cut(s)	1593
Eco52I	CGGCCG	2 cut(s)	244, 449
Eco88I	CYCGRG	4 cut(s)	423, 488, 593, 905
Eco91I	GGTNACC	2 cut(s)	208, 1906
EcoNI	CCTNNNNNAGG	2 cut(s)	1455, 1547
EcoO109I	RGGNCCY	2 cut(s)	922, 1489
EcoO65I	GGTNACC	2 cut(s)	208, 1906
EcoRI	GAATTC	3 cut(s)	598, 1555, 1645
EcoRII	CCWGG	7 cut(s)	294, 1059, 1125, 1832, 1910, 2112, 2228
EcoRV	GATATC	1 cut(s)	649
EcoT38I	GRGCYC	2 cut(s)	699, 2237
EgeI	GGCGCC	1 cut(s)	2002
EheI	GGCGCC	1 cut(s)	2002
Esp3I	CGTCTC	1 cut(s)	780
FalI	AAGNNNNNCTT	2 cut(s)	530, 562
FaqI	GGGAC	3 cut(s)	244, 935, 1360
FauI	CCCGC	4 cut(s)	137, 394, 534, 649
FbaI	TGATCA	3 cut(s)	858, 945, 1750
FokI	GGATG	5 cut(s)	1250, 1257, 1434, 1901, 2131
FriOI	GRGCYC	2 cut(s)	699, 2237
FspBI	CTAG	2 cut(s)	1037, 1544
FspI	TGCGCA	1 cut(s)	1074
GlaI	GCGC	8 cut(s)	370, 523, 567, 1074, 1378, 1593, 1880, 2002
GsuI	CTGGAG	1 cut(s)	2016
HaeII	RGCGCY	3 cut(s)	1380, 1595, 2004
HgaI	GACGC	4 cut(s)	463, 762, 773, 922
HhaI	GCGC	8 cut(s)	371, 524, 568, 1075, 1379, 1594, 1881, 2003
Hin1I	GRCGYC	2 cut(s)	773, 2001
Hin6I	GCGC	8 cut(s)	369, 522, 566, 1073, 1377, 1592, 1879, 2001
HinP1I	GCGC	8 cut(s)	369, 522, 566, 1073, 1377, 1592, 1879, 2001
HphI	GGTGA	5 cut(s)	107, 185, 220, 541, 1955
Hpy188I	TCNGA	7 cut(s)	436, 629, 763, 984, 1221, 1786, 1792
Hpy99I	CGWCG	6 cut(s)	457, 473, 589, 614, 767, 938
HpyAV	CCTTC	8 cut(s)	487, 746, 824, 872, 983, 1470, 1892, 2092
HpyCH4III	ACNGT	3 cut(s)	1123, 1309, 2131
HpyCH4IV	ACGT	1 cut(s)	612
HpyF3I	CTNAG	8 cut(s)	477, 626, 897, 1350, 1695, 1789, 2118, 2202
HpySE526I	ACGT	1 cut(s)	612
Hsp92I	GRCGYC	2 cut(s)	773, 2001
HspAI	GCGC	8 cut(s)	369, 522, 566, 1073, 1377, 1592, 1879, 2001
KasI	GGCGCC	1 cut(s)	2000
KflI	GGGWCCC	1 cut(s)	922
Kpn2I	TCCGGA	1 cut(s)	573
KroI	GCCGGC	1 cut(s)	265
KroNI	GCCGGC	1 cut(s)	267
Ksp22I	TGATCA	3 cut(s)	858, 945, 1750
KspI	CCGCGG	2 cut(s)	244, 645
LmnI	GCTCC	7 cut(s)	437, 643, 718, 968, 1033, 1129, 1360
Lsp1109I	GCAGC	9 cut(s)	601, 609, 880, 1087, 1287, 1300, 1431, 1434, 1535
LweI	GCATC	4 cut(s)	1681, 1818, 1981, 2153
MaeI	CTAG	2 cut(s)	1037, 1544
MaeII	ACGT	1 cut(s)	612
MaeIII	GTNAC	8 cut(s)	173, 208, 325, 909, 1147, 1312, 1906, 2190
MbiI	CCGCTC	1 cut(s)	448
MboII	GAAGA	9 cut(s)	397, 538, 668, 839, 1643, 1654, 1716, 1952, 2114
MfeI	CAATTG	1 cut(s)	1754
MflI	RGATCY	3 cut(s)	1063, 1706, 2215
MhlI	GDGCHC	8 cut(s)	489, 699, 942, 965, 1534, 1542, 2127, 2237
MlsI	TGGCCA	2 cut(s)	1019, 1832
MluNI	TGGCCA	2 cut(s)	1019, 1832
Mly113I	GGCGCC	1 cut(s)	2001
MlyI	GAGTC	5 cut(s)	639, 1111, 1303, 1781, 2170
MmeI	TCCRAC	3 cut(s)	459, 786, 1244
Mox20I	TGGCCA	2 cut(s)	1019, 1832
MroI	TCCGGA	1 cut(s)	573
MroNI	GCCGGC	1 cut(s)	265
MscI	TGGCCA	2 cut(s)	1019, 1832
MseI	TTAA	5 cut(s)	851, 1155, 1371, 1470, 2012
Msp20I	TGGCCA	2 cut(s)	1019, 1832
MspA1I	CMGCKG	4 cut(s)	243, 313, 644, 1300
MunI	CAATTG	1 cut(s)	1754
Mva1269I	GAATGC	1 cut(s)	1712
MvaI	CCWGG	7 cut(s)	296, 1061, 1127, 1834, 1912, 2114, 2230
MvnI	CGCG	8 cut(s)	132, 243, 457, 522, 644, 686, 767, 1031
NaeI	GCCGGC	1 cut(s)	267
NarI	GGCGCC	1 cut(s)	2001
NciI	CCSGG	5 cut(s)	424, 425, 560, 653, 920
NcoI	CCATGG	4 cut(s)	270, 1011, 1653, 2248
NgoMIV	GCCGGC	1 cut(s)	265
NheI	GCTAGC	1 cut(s)	1036
NlaIV	GGNNCC	8 cut(s)	639, 923, 924, 1356, 1387, 1491, 1541, 2002
NmeAIII	GCCGAG	5 cut(s)	397, 614, 684, 1317, 1927
NmuCI	GTSAC	4 cut(s)	173, 208, 325, 1147
NsbI	TGCGCA	1 cut(s)	1074
PaeR7I	CTCGAG	2 cut(s)	488, 593
PaqCI	CACCTGC	1 cut(s)	472
PcsI	WCGNNNNNNNCGW	1 cut(s)	690
PctI	GAATGC	1 cut(s)	1712
PdiI	GCCGGC	1 cut(s)	267
PfoI	TCCNGGA	2 cut(s)	651, 1125
PinAI	ACCGGT	3 cut(s)	170, 740, 1366
Ple19I	CGATCG	1 cut(s)	606
PleI	GAGTC	5 cut(s)	638, 1110, 1302, 1781, 2170
PluTI	GGCGCC	1 cut(s)	2004
PpsI	GAGTC	5 cut(s)	638, 1110, 1302, 1781, 2170
PpuMI	RGGWCCY	2 cut(s)	922, 1489
Psp5II	RGGWCCY	2 cut(s)	922, 1489
Psp6I	CCWGG	7 cut(s)	294, 1059, 1125, 1832, 1910, 2112, 2228
PspEI	GGTNACC	2 cut(s)	208, 1906
PspGI	CCWGG	7 cut(s)	294, 1059, 1125, 1832, 1910, 2112, 2228
PspN4I	GGNNCC	8 cut(s)	639, 923, 924, 1356, 1387, 1491, 1541, 2002
PspPPI	RGGWCCY	2 cut(s)	922, 1489
PstNI	CAGNNNCTG	1 cut(s)	1066
PsuI	RGATCY	3 cut(s)	1063, 1706, 2215
PvuI	CGATCG	1 cut(s)	606
PvuII	CAGCTG	2 cut(s)	313, 1300
RsaI	GTAC	3 cut(s)	665, 1948, 2091
RsaNI	GTAC	3 cut(s)	664, 1947, 2090
SacII	CCGCGG	2 cut(s)	244, 645
SaqAI	TTAA	5 cut(s)	851, 1155, 1371, 1470, 2012
SchI	GAGTC	5 cut(s)	639, 1111, 1303, 1781, 2170
SduI	GDGCHC	8 cut(s)	489, 699, 942, 965, 1534, 1542, 2127, 2237
SfaNI	GCATC	4 cut(s)	1681, 1818, 1981, 2153
SfiI	GGCCNNNNNGGCC	2 cut(s)	425, 1016
SfoI	GGCGCC	1 cut(s)	2002
Sfr274I	CTCGAG	2 cut(s)	488, 593
Sfr303I	CCGCGG	2 cut(s)	244, 645
SgrBI	CCGCGG	2 cut(s)	244, 645
SinI	GGWCC	4 cut(s)	255, 319, 922, 1489
SlaI	CTCGAG	2 cut(s)	488, 593
SmaI	CCCGGG	1 cut(s)	425
SmlI	CTYRAG	3 cut(s)	488, 593, 2236
SmoI	CTYRAG	3 cut(s)	488, 593, 2236
SrfI	GCCCGGGC	1 cut(s)	425
SspDI	GGCGCC	1 cut(s)	2000
SspMI	CTAG	2 cut(s)	1037, 1544
TaaI	ACNGT	3 cut(s)	1123, 1309, 2131
TaiI	ACGT	1 cut(s)	615
TatI	WGTACW	1 cut(s)	1946
Tru1I	TTAA	5 cut(s)	851, 1155, 1371, 1470, 2012
Tru9I	TTAA	5 cut(s)	851, 1155, 1371, 1470, 2012
TscAI	CASTG	4 cut(s)	1312, 1614, 1979, 2134
TseFI	GTSAC	4 cut(s)	173, 208, 325, 1147
TseI	GCWGC	9 cut(s)	589, 622, 893, 1075, 1288, 1300, 1419, 1422, 1523
Tsp45I	GTSAC	4 cut(s)	173, 208, 325, 1147
TspDTI	ATGAA	5 cut(s)	551, 1013, 1163, 1526, 1905
TspGWI	ACGGA	4 cut(s)	404, 955, 1595, 1865
TspMI	CCCGGG	1 cut(s)	423
TspRI	CASTG	4 cut(s)	1312, 1614, 1979, 2134
VpaK11BI	GGWCC	4 cut(s)	255, 319, 922, 1489
XagI	CCTNNNNNAGG	2 cut(s)	1455, 1547
XapI	RAATTY	5 cut(s)	110, 598, 1555, 1645, 1825
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1660
XhoI	CTCGAG	2 cut(s)	488, 593
XmaI	CCCGGG	1 cut(s)	423
XspI	CTAG	2 cut(s)	1037, 1544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.