Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0118031 |
| rosa_laevigata | RLG00000018388 |
| rosa_multiflora | Rmu_sc0000948.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00126040 |
| rosa_samantha | Rh2AG272200 Rh2BG284200 Rh2DG298400 |
| rosa_wichuraiana | Rw2G021510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 391 |
| AclWI | GGATC | 1 cut(s) | 202 |
| AcoI | YGGCCR | 1 cut(s) | 15 |
| AcsI | RAATTY | 1 cut(s) | 173 |
| AcuI | CTGAAG | 1 cut(s) | 357 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 91 |
| AflIII | ACRYGT | 1 cut(s) | 410 |
| AgsI | TTSAA | 4 cut(s) | 91, 100, 157, 263 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 387, 419 |
| AluBI | AGCT | 3 cut(s) | 239, 387, 398 |
| AluI | AGCT | 3 cut(s) | 239, 387, 398 |
| AlwI | GGATC | 1 cut(s) | 202 |
| AoxI | GGCC | 1 cut(s) | 15 |
| ApoI | RAATTY | 1 cut(s) | 173 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 95, 412 |
| AspS9I | GGNCC | 2 cut(s) | 82, 162 |
| AsuHPI | GGTGA | 1 cut(s) | 286 |
| AvaII | GGWCC | 2 cut(s) | 82, 162 |
| BalI | TGGCCA | 1 cut(s) | 17 |
| BbsI | GAAGAC | 2 cut(s) | 88, 386 |
| BccI | CCATC | 1 cut(s) | 173 |
| BceAI | ACGGC | 1 cut(s) | 35 |
| BciVI | GTATCC | 1 cut(s) | 320 |
| BfaI | CTAG | 1 cut(s) | 318 |
| BfuI | GTATCC | 1 cut(s) | 320 |
| Bme18I | GGWCC | 2 cut(s) | 82, 162 |
| BmgT120I | GGNCC | 2 cut(s) | 82, 162 |
| BmiI | GGNNCC | 1 cut(s) | 163 |
| BpiI | GAAGAC | 2 cut(s) | 88, 386 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 91 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BsgI | GTGCAG | 1 cut(s) | 402 |
| Bsh1236I | CGCG | 1 cut(s) | 391 |
| BshFI | GGCC | 1 cut(s) | 17 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BsmI | GAATGC | 1 cut(s) | 208 |
| BsnI | GGCC | 1 cut(s) | 17 |
| Bsp143I | GATC | 2 cut(s) | 194, 286 |
| BspANI | GGCC | 1 cut(s) | 17 |
| BspFNI | CGCG | 1 cut(s) | 391 |
| BspLI | GGNNCC | 1 cut(s) | 163 |
| BspPI | GGATC | 1 cut(s) | 202 |
| BssMI | GATC | 2 cut(s) | 194, 286 |
| Bst4CI | ACNGT | 1 cut(s) | 135 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstC8I | GCNNGC | 4 cut(s) | 61, 298, 315, 389 |
| BstFNI | CGCG | 1 cut(s) | 391 |
| BstKTI | GATC | 2 cut(s) | 197, 289 |
| BstMBI | GATC | 2 cut(s) | 194, 286 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 56 |
| BstNSI | RCATGY | 2 cut(s) | 300, 414 |
| BstUI | CGCG | 1 cut(s) | 391 |
| BstV2I | GAAGAC | 2 cut(s) | 88, 386 |
| BstX2I | RGATCY | 1 cut(s) | 194 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 194 |
| BsuI | GTATCC | 1 cut(s) | 320 |
| BsuRI | GGCC | 1 cut(s) | 17 |
| BtgZI | GCGATG | 1 cut(s) | 221 |
| BtsIMutI | CAGTG | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 4 cut(s) | 61, 298, 315, 389 |
| Cfr13I | GGNCC | 2 cut(s) | 82, 162 |
| CviAII | CATG | 6 cut(s) | 230, 290, 297, 301, 411, 422 |
| DpnI | GATC | 2 cut(s) | 196, 288 |
| DpnII | GATC | 2 cut(s) | 194, 286 |
| EaeI | YGGCCR | 1 cut(s) | 15 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| Eco47I | GGWCC | 2 cut(s) | 82, 162 |
| Eco57I | CTGAAG | 1 cut(s) | 357 |
| EcoRI | GAATTC | 1 cut(s) | 173 |
| EcoT22I | ATGCAT | 1 cut(s) | 302 |
| FaeI | CATG | 6 cut(s) | 233, 293, 300, 304, 414, 425 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 387, 419 |
| FatI | CATG | 6 cut(s) | 229, 289, 296, 300, 410, 421 |
| FspBI | CTAG | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 17 |
| Hin1II | CATG | 6 cut(s) | 233, 293, 300, 304, 414, 425 |
| HincII | GTYRAC | 1 cut(s) | 31 |
| HindII | GTYRAC | 1 cut(s) | 31 |
| HinfI | GANTC | 3 cut(s) | 8, 118, 277 |
| HphI | GGTGA | 1 cut(s) | 286 |
| Hpy166II | GTNNAC | 1 cut(s) | 31 |
| Hpy188I | TCNGA | 1 cut(s) | 282 |
| Hpy8I | GTNNAC | 1 cut(s) | 31 |
| HpyAV | CCTTC | 1 cut(s) | 85 |
| HpyCH4III | ACNGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 3 cut(s) | 229, 300, 419 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 56 |
| Hsp92II | CATG | 6 cut(s) | 233, 293, 300, 304, 414, 425 |
| Kzo9I | GATC | 2 cut(s) | 194, 286 |
| LpnPI | CCDG | 4 cut(s) | 25, 45, 154, 397 |
| MaeI | CTAG | 1 cut(s) | 318 |
| MalI | GATC | 2 cut(s) | 196, 288 |
| MboI | GATC | 2 cut(s) | 194, 286 |
| MboII | GAAGA | 3 cut(s) | 88, 122, 391 |
| MflI | RGATCY | 1 cut(s) | 194 |
| MlsI | TGGCCA | 1 cut(s) | 17 |
| MluCI | AATT | 3 cut(s) | 100, 152, 173 |
| MluNI | TGGCCA | 1 cut(s) | 17 |
| MnlI | CCTC | 2 cut(s) | 108, 314 |
| Mox20I | TGGCCA | 1 cut(s) | 17 |
| Mph1103I | ATGCAT | 1 cut(s) | 302 |
| MroXI | GAANNNNTTC | 2 cut(s) | 95, 412 |
| MscI | TGGCCA | 1 cut(s) | 17 |
| Msp20I | TGGCCA | 1 cut(s) | 17 |
| Mva1269I | GAATGC | 1 cut(s) | 208 |
| MvnI | CGCG | 1 cut(s) | 391 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 56 |
| NdeII | GATC | 2 cut(s) | 194, 286 |
| NlaIII | CATG | 6 cut(s) | 233, 293, 300, 304, 414, 425 |
| NlaIV | GGNNCC | 1 cut(s) | 163 |
| NsiI | ATGCAT | 1 cut(s) | 302 |
| NspI | RCATGY | 2 cut(s) | 300, 414 |
| PaeI | GCATGC | 1 cut(s) | 300 |
| PciI | ACATGT | 1 cut(s) | 410 |
| PctI | GAATGC | 1 cut(s) | 208 |
| PdmI | GAANNNNTTC | 2 cut(s) | 95, 412 |
| PfeI | GAWTC | 3 cut(s) | 8, 118, 277 |
| PscI | ACATGT | 1 cut(s) | 410 |
| PspN4I | GGNNCC | 1 cut(s) | 163 |
| PspPI | GGNCC | 2 cut(s) | 82, 162 |
| PsuI | RGATCY | 1 cut(s) | 194 |
| Sau3AI | GATC | 2 cut(s) | 194, 286 |
| Sau96I | GGNCC | 2 cut(s) | 82, 162 |
| SetI | ASST | 6 cut(s) | 96, 241, 325, 362, 389, 400 |
| SinI | GGWCC | 2 cut(s) | 82, 162 |
| SphI | GCATGC | 1 cut(s) | 300 |
| Sse9I | AATT | 3 cut(s) | 100, 152, 173 |
| SspMI | CTAG | 1 cut(s) | 318 |
| TaaI | ACNGT | 1 cut(s) | 135 |
| TasI | AATT | 3 cut(s) | 100, 152, 173 |
| TfiI | GAWTC | 3 cut(s) | 8, 118, 277 |
| TscAI | CASTG | 1 cut(s) | 138 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| TspRI | CASTG | 1 cut(s) | 138 |
| VpaK11BI | GGWCC | 2 cut(s) | 82, 162 |
| XapI | RAATTY | 1 cut(s) | 173 |
| XceI | RCATGY | 2 cut(s) | 300, 414 |
| XmnI | GAANNNNTTC | 2 cut(s) | 95, 412 |
| XspI | CTAG | 1 cut(s) | 318 |
| Zsp2I | ATGCAT | 1 cut(s) | 302 |