Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0118031 |
| rosa_laevigata | RLG00000018388 |
| rosa_multiflora | Rmu_sc0000948.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00126040 |
| rosa_samantha | Rh2AG272200 Rh2BG284200 Rh2DG298400 |
| rosa_wichuraiana | Rw2G021510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 202 |
| AciI | CCGC | 1 cut(s) | 202 |
| AcuI | CTGAAG | 1 cut(s) | 210 |
| AflIII | ACRYGT | 1 cut(s) | 263 |
| AgsI | TTSAA | 1 cut(s) | 101 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 240, 272 |
| AluBI | AGCT | 3 cut(s) | 188, 240, 251 |
| AluI | AGCT | 3 cut(s) | 188, 240, 251 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| AseI | ATTAAT | 1 cut(s) | 74 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 265 |
| AsuHPI | GGTGA | 1 cut(s) | 19 |
| BccI | CCATC | 1 cut(s) | 46 |
| BciVI | GTATCC | 1 cut(s) | 173 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BfaI | CTAG | 2 cut(s) | 171, 237 |
| BfuI | GTATCC | 1 cut(s) | 173 |
| BmsI | GCATC | 1 cut(s) | 69 |
| BsaI | GGTCTC | 1 cut(s) | 128 |
| BseGI | GGATG | 1 cut(s) | 60 |
| BseMII | CTCAG | 1 cut(s) | 123 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BslFI | GGGAC | 2 cut(s) | 72, 95 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| BsmFI | GGGAC | 2 cut(s) | 72, 95 |
| Bso31I | GGTCTC | 1 cut(s) | 128 |
| Bsp143I | GATC | 1 cut(s) | 139 |
| BspACI | CCGC | 1 cut(s) | 202 |
| BspCNI | CTCAG | 1 cut(s) | 124 |
| BspTNI | GGTCTC | 1 cut(s) | 128 |
| BsrBI | CCGCTC | 1 cut(s) | 202 |
| BssMI | GATC | 1 cut(s) | 139 |
| Bst4CI | ACNGT | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 5 cut(s) | 58, 151, 168, 204, 242 |
| BstDEI | CTNAG | 3 cut(s) | 132, 184, 231 |
| BstF5I | GGATG | 1 cut(s) | 60 |
| BstKTI | GATC | 1 cut(s) | 142 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMBI | GATC | 1 cut(s) | 139 |
| BstNSI | RCATGY | 2 cut(s) | 153, 267 |
| BsuI | GTATCC | 1 cut(s) | 173 |
| BtsCI | GGATG | 1 cut(s) | 60 |
| Cac8I | GCNNGC | 5 cut(s) | 58, 151, 168, 204, 242 |
| CviAII | CATG | 4 cut(s) | 91, 143, 150, 264 |
| CviJI | RGCY | 5 cut(s) | 56, 188, 206, 240, 251 |
| CviKI_1 | RGCY | 5 cut(s) | 56, 188, 206, 240, 251 |
| DdeI | CTNAG | 3 cut(s) | 132, 184, 231 |
| DpnI | GATC | 1 cut(s) | 141 |
| DpnII | GATC | 1 cut(s) | 139 |
| Eco31I | GGTCTC | 1 cut(s) | 128 |
| Eco57I | CTGAAG | 1 cut(s) | 210 |
| FaeI | CATG | 4 cut(s) | 94, 146, 153, 267 |
| FaiI | YATR | 8 cut(s) | 92, 120, 144, 151, 164, 226, 228, 265 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 224, 256, 240, 272 |
| FaqI | GGGAC | 2 cut(s) | 72, 95 |
| FatI | CATG | 4 cut(s) | 90, 142, 149, 263 |
| FauI | CCCGC | 1 cut(s) | 195 |
| FokI | GGATG | 1 cut(s) | 47 |
| FspBI | CTAG | 2 cut(s) | 171, 237 |
| Hin1II | CATG | 4 cut(s) | 94, 146, 153, 267 |
| HinfI | GANTC | 1 cut(s) | 10 |
| HphI | GGTGA | 1 cut(s) | 19 |
| Hpy188III | TCNNGA | 2 cut(s) | 69, 131 |
| HpyAV | CCTTC | 1 cut(s) | 46 |
| HpyCH4III | ACNGT | 1 cut(s) | 86 |
| HpyCH4V | TGCA | 3 cut(s) | 60, 109, 272 |
| HpyF3I | CTNAG | 3 cut(s) | 132, 184, 231 |
| Hsp92II | CATG | 4 cut(s) | 94, 146, 153, 267 |
| Kzo9I | GATC | 1 cut(s) | 139 |
| LmnI | GCTCC | 1 cut(s) | 199 |
| LpnPI | CCDG | 3 cut(s) | 36, 54, 144 |
| LweI | GCATC | 1 cut(s) | 69 |
| MaeI | CTAG | 2 cut(s) | 171, 237 |
| MaeIII | GTNAC | 1 cut(s) | 31 |
| MalI | GATC | 1 cut(s) | 141 |
| MbiI | CCGCTC | 1 cut(s) | 202 |
| MboI | GATC | 1 cut(s) | 139 |
| MboII | GAAGA | 1 cut(s) | 34 |
| MluCI | AATT | 1 cut(s) | 114 |
| MnlI | CCTC | 1 cut(s) | 167 |
| MroXI | GAANNNNTTC | 1 cut(s) | 265 |
| MseI | TTAA | 2 cut(s) | 18, 74 |
| NdeII | GATC | 1 cut(s) | 139 |
| NlaIII | CATG | 4 cut(s) | 94, 146, 153, 267 |
| NspI | RCATGY | 2 cut(s) | 153, 267 |
| PaeI | GCATGC | 1 cut(s) | 153 |
| PciI | ACATGT | 1 cut(s) | 263 |
| PdmI | GAANNNNTTC | 1 cut(s) | 265 |
| PfeI | GAWTC | 1 cut(s) | 10 |
| PscI | ACATGT | 1 cut(s) | 263 |
| PshBI | ATTAAT | 1 cut(s) | 74 |
| SaqAI | TTAA | 2 cut(s) | 18, 74 |
| Sau3AI | GATC | 1 cut(s) | 139 |
| SetI | ASST | 7 cut(s) | 18, 38, 178, 190, 215, 242, 253 |
| SfaNI | GCATC | 1 cut(s) | 69 |
| SphI | GCATGC | 1 cut(s) | 153 |
| Sse9I | AATT | 1 cut(s) | 114 |
| SsiI | CCGC | 1 cut(s) | 202 |
| SspMI | CTAG | 2 cut(s) | 171, 237 |
| TaaI | ACNGT | 1 cut(s) | 86 |
| TasI | AATT | 1 cut(s) | 114 |
| TfiI | GAWTC | 1 cut(s) | 10 |
| Tru1I | TTAA | 2 cut(s) | 18, 74 |
| Tru9I | TTAA | 2 cut(s) | 18, 74 |
| TspDTI | ATGAA | 1 cut(s) | 28 |
| VspI | ATTAAT | 1 cut(s) | 74 |
| XceI | RCATGY | 2 cut(s) | 153, 267 |
| XmnI | GAANNNNTTC | 1 cut(s) | 265 |
| XspI | CTAG | 2 cut(s) | 171, 237 |