Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12845 |
| malus_domestica | MD09G1004200.v1.1 |
| prunus_persica | Prupe.3G312500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0176391 |
| rosa_laevigata | RLG00000022409 |
| rosa_multiflora | Rmu_sc0009140.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00076500 |
| rosa_samantha | Rh2AG672300 Rh2BG683800 Rh2CG646500 Rh2DG697300 |
| rosa_wichuraiana | Rw2G055140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 258 |
| AcoI | YGGCCR | 1 cut(s) | 237 |
| AcsI | RAATTY | 1 cut(s) | 311 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 209, 252 |
| AgsI | TTSAA | 1 cut(s) | 141 |
| AluBI | AGCT | 2 cut(s) | 71, 207 |
| AluI | AGCT | 2 cut(s) | 71, 207 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 10 |
| AoxI | GGCC | 2 cut(s) | 161, 237 |
| ApeKI | GCWGC | 2 cut(s) | 278, 281 |
| ApoI | RAATTY | 1 cut(s) | 311 |
| AspS9I | GGNCC | 1 cut(s) | 7 |
| AvaII | GGWCC | 1 cut(s) | 7 |
| BbvI | GCAGC | 2 cut(s) | 265, 268 |
| BceAI | ACGGC | 1 cut(s) | 65 |
| BisI | GCNGC | 2 cut(s) | 279, 282 |
| BlsI | GCNGC | 2 cut(s) | 280, 283 |
| Bme18I | GGWCC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 1 cut(s) | 7 |
| BpmI | CTGGAG | 1 cut(s) | 60 |
| Bpu10I | CCTNAGC | 1 cut(s) | 208 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 209, 252 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 209, 252 |
| BseMII | CTCAG | 2 cut(s) | 158, 222 |
| BseXI | GCAGC | 2 cut(s) | 265, 268 |
| BseYI | CCCAGC | 1 cut(s) | 284 |
| BshFI | GGCC | 2 cut(s) | 163, 239 |
| BslFI | GGGAC | 1 cut(s) | 185 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 209, 252 |
| BsmFI | GGGAC | 1 cut(s) | 185 |
| BsmI | GAATGC | 3 cut(s) | 37, 106, 325 |
| BsnI | GGCC | 2 cut(s) | 163, 239 |
| BspACI | CCGC | 1 cut(s) | 258 |
| BspANI | GGCC | 2 cut(s) | 163, 239 |
| BspCNI | CTCAG | 2 cut(s) | 159, 221 |
| Bst4CI | ACNGT | 2 cut(s) | 53, 251 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstDEI | CTNAG | 2 cut(s) | 167, 208 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 10, 77, 191 |
| BstV1I | GCAGC | 2 cut(s) | 265, 268 |
| BsuRI | GGCC | 2 cut(s) | 163, 239 |
| CaiI | CAGNNNCTG | 1 cut(s) | 10 |
| Cfr13I | GGNCC | 1 cut(s) | 7 |
| CseI | GACGC | 1 cut(s) | 174 |
| CviJI | RGCY | 5 cut(s) | 71, 80, 163, 207, 239 |
| CviKI_1 | RGCY | 5 cut(s) | 71, 80, 163, 207, 239 |
| DdeI | CTNAG | 2 cut(s) | 167, 208 |
| EaeI | YGGCCR | 1 cut(s) | 237 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| Eco47I | GGWCC | 1 cut(s) | 7 |
| EcoO109I | RGGNCCY | 1 cut(s) | 7 |
| FaiI | YATR | 4 cut(s) | 91, 93, 113, 276 |
| FaqI | GGGAC | 1 cut(s) | 185 |
| FauNDI | CATATG | 1 cut(s) | 91 |
| Fnu4HI | GCNGC | 2 cut(s) | 279, 282 |
| Fsp4HI | GCNGC | 2 cut(s) | 279, 282 |
| GluI | GCNGC | 2 cut(s) | 279, 282 |
| GsaI | CCCAGC | 1 cut(s) | 288 |
| GsuI | CTGGAG | 1 cut(s) | 60 |
| HaeIII | GGCC | 2 cut(s) | 163, 239 |
| HgaI | GACGC | 1 cut(s) | 174 |
| HinfI | GANTC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 2 cut(s) | 168, 318 |
| HpyCH4III | ACNGT | 2 cut(s) | 53, 251 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 13, 48, 104, 194, 266 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 10, 77, 191 |
| HpyF3I | CTNAG | 2 cut(s) | 167, 208 |
| LpnPI | CCDG | 7 cut(s) | 6, 23, 58, 90, 195, 210, 270 |
| Lsp1109I | GCAGC | 2 cut(s) | 265, 268 |
| MaeIII | GTNAC | 2 cut(s) | 143, 186 |
| MboII | GAAGA | 3 cut(s) | 109, 126, 129 |
| MluCI | AATT | 4 cut(s) | 63, 151, 178, 311 |
| MlyI | GAGTC | 1 cut(s) | 178 |
| MnlI | CCTC | 4 cut(s) | 20, 127, 174, 183 |
| MseI | TTAA | 2 cut(s) | 308, 328 |
| Mva1269I | GAATGC | 3 cut(s) | 37, 106, 325 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 10, 77, 191 |
| NdeI | CATATG | 1 cut(s) | 91 |
| NmuCI | GTSAC | 2 cut(s) | 143, 186 |
| PctI | GAATGC | 3 cut(s) | 37, 106, 325 |
| PkrI | GCNGC | 2 cut(s) | 280, 283 |
| PleI | GAGTC | 1 cut(s) | 177 |
| PpsI | GAGTC | 1 cut(s) | 177 |
| PpuMI | RGGWCCY | 1 cut(s) | 7 |
| Psp5II | RGGWCCY | 1 cut(s) | 7 |
| PspFI | CCCAGC | 1 cut(s) | 284 |
| PspPI | GGNCC | 1 cut(s) | 7 |
| PspPPI | RGGWCCY | 1 cut(s) | 7 |
| PstNI | CAGNNNCTG | 1 cut(s) | 10 |
| SaqAI | TTAA | 2 cut(s) | 308, 328 |
| SatI | GCNGC | 2 cut(s) | 279, 282 |
| Sau96I | GGNCC | 1 cut(s) | 7 |
| SchI | GAGTC | 1 cut(s) | 178 |
| SetI | ASST | 5 cut(s) | 9, 73, 199, 209, 231 |
| SinI | GGWCC | 1 cut(s) | 7 |
| Sse9I | AATT | 4 cut(s) | 63, 151, 178, 311 |
| SsiI | CCGC | 1 cut(s) | 258 |
| TaaI | ACNGT | 2 cut(s) | 53, 251 |
| TasI | AATT | 4 cut(s) | 63, 151, 178, 311 |
| Tru1I | TTAA | 2 cut(s) | 308, 328 |
| Tru9I | TTAA | 2 cut(s) | 308, 328 |
| TseFI | GTSAC | 2 cut(s) | 143, 186 |
| TseI | GCWGC | 2 cut(s) | 278, 281 |
| Tsp45I | GTSAC | 2 cut(s) | 143, 186 |
| TspDTI | ATGAA | 1 cut(s) | 222 |
| VpaK11BI | GGWCC | 1 cut(s) | 7 |
| XapI | RAATTY | 1 cut(s) | 311 |