Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12845 |
| malus_domestica | MD09G1004200.v1.1 |
| prunus_persica | Prupe.3G312500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0176391 |
| rosa_laevigata | RLG00000022409 |
| rosa_multiflora | Rmu_sc0009140.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00076500 |
| rosa_samantha | Rh2AG672300 Rh2BG683800 Rh2CG646500 Rh2DG697300 |
| rosa_wichuraiana | Rw2G055140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 20 |
| AciI | CCGC | 1 cut(s) | 291 |
| AcoI | YGGCCR | 1 cut(s) | 270 |
| AcsI | RAATTY | 1 cut(s) | 347 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 242, 285 |
| AgsI | TTSAA | 1 cut(s) | 174 |
| AleI | CACNNNNGTG | 1 cut(s) | 83 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| AoxI | GGCC | 2 cut(s) | 194, 270 |
| ApeKI | GCWGC | 3 cut(s) | 311, 314, 317 |
| ApoI | RAATTY | 1 cut(s) | 347 |
| AspLEI | GCGC | 1 cut(s) | 242 |
| BbvI | GCAGC | 3 cut(s) | 298, 301, 304 |
| BceAI | ACGGC | 1 cut(s) | 95 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfmI | CTRYAG | 1 cut(s) | 27 |
| BfuAI | ACCTGC | 1 cut(s) | 20 |
| BisI | GCNGC | 3 cut(s) | 312, 315, 318 |
| BlsI | GCNGC | 3 cut(s) | 313, 316, 319 |
| BmrI | ACTGGG | 1 cut(s) | 177 |
| BmuI | ACTGGG | 1 cut(s) | 177 |
| BpmI | CTGGAG | 1 cut(s) | 90 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 242, 285 |
| Bse1I | ACTGG | 2 cut(s) | 81, 183 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 242, 285 |
| BseMII | CTCAG | 1 cut(s) | 191 |
| BseNI | ACTGG | 2 cut(s) | 81, 183 |
| BseXI | GCAGC | 3 cut(s) | 298, 301, 304 |
| BseYI | CCCAGC | 1 cut(s) | 320 |
| BshFI | GGCC | 2 cut(s) | 196, 272 |
| BslFI | GGGAC | 1 cut(s) | 218 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 242, 285 |
| BsmFI | GGGAC | 1 cut(s) | 218 |
| BsmI | GAATGC | 2 cut(s) | 136, 361 |
| BsnI | GGCC | 2 cut(s) | 196, 272 |
| BspACI | CCGC | 1 cut(s) | 291 |
| BspANI | GGCC | 2 cut(s) | 196, 272 |
| BspCNI | CTCAG | 1 cut(s) | 192 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BspMI | ACCTGC | 1 cut(s) | 20 |
| BsrI | ACTGG | 2 cut(s) | 81, 183 |
| Bst4CI | ACNGT | 1 cut(s) | 284 |
| Bst6I | CTCTTC | 3 cut(s) | 28, 169, 175 |
| BstDEI | CTNAG | 2 cut(s) | 15, 200 |
| BstHHI | GCGC | 1 cut(s) | 242 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 35, 107, 224, 317 |
| BstNSI | RCATGY | 1 cut(s) | 68 |
| BstSFI | CTRYAG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 3 cut(s) | 298, 301, 304 |
| BsuRI | GGCC | 2 cut(s) | 196, 272 |
| BtsIMutI | CAGTG | 1 cut(s) | 88 |
| BveI | ACCTGC | 1 cut(s) | 20 |
| CfoI | GCGC | 1 cut(s) | 242 |
| CseI | GACGC | 1 cut(s) | 207 |
| CviAII | CATG | 1 cut(s) | 65 |
| CviJI | RGCY | 6 cut(s) | 5, 38, 101, 110, 196, 272 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 38, 101, 110, 196, 272 |
| DdeI | CTNAG | 2 cut(s) | 15, 200 |
| EaeI | YGGCCR | 1 cut(s) | 270 |
| Eam1104I | CTCTTC | 3 cut(s) | 28, 169, 175 |
| EarI | CTCTTC | 3 cut(s) | 28, 169, 175 |
| FaeI | CATG | 1 cut(s) | 68 |
| FaiI | YATR | 6 cut(s) | 66, 73, 121, 123, 143, 309 |
| FaqI | GGGAC | 1 cut(s) | 218 |
| FatI | CATG | 1 cut(s) | 64 |
| FauNDI | CATATG | 1 cut(s) | 121 |
| Fnu4HI | GCNGC | 3 cut(s) | 312, 315, 318 |
| Fsp4HI | GCNGC | 3 cut(s) | 312, 315, 318 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GlaI | GCGC | 1 cut(s) | 241 |
| GluI | GCNGC | 3 cut(s) | 312, 315, 318 |
| GsaI | CCCAGC | 1 cut(s) | 324 |
| GsuI | CTGGAG | 1 cut(s) | 90 |
| HaeIII | GGCC | 2 cut(s) | 196, 272 |
| HgaI | GACGC | 1 cut(s) | 207 |
| HhaI | GCGC | 1 cut(s) | 242 |
| Hin1II | CATG | 1 cut(s) | 68 |
| Hin6I | GCGC | 1 cut(s) | 240 |
| HinP1I | GCGC | 1 cut(s) | 240 |
| HinfI | GANTC | 1 cut(s) | 202 |
| Hpy188I | TCNGA | 2 cut(s) | 201, 354 |
| HpyCH4III | ACNGT | 1 cut(s) | 284 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 134, 227, 299 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 35, 107, 224, 317 |
| HpyF3I | CTNAG | 2 cut(s) | 15, 200 |
| Hsp92II | CATG | 1 cut(s) | 68 |
| HspAI | GCGC | 1 cut(s) | 240 |
| LpnPI | CCDG | 7 cut(s) | 15, 94, 120, 196, 228, 243, 306 |
| Lsp1109I | GCAGC | 3 cut(s) | 298, 301, 304 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MaeIII | GTNAC | 2 cut(s) | 176, 219 |
| MboII | GAAGA | 5 cut(s) | 15, 40, 139, 156, 162 |
| MluCI | AATT | 3 cut(s) | 93, 211, 347 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 4 cut(s) | 157, 178, 207, 216 |
| MseI | TTAA | 1 cut(s) | 344 |
| MslI | CAYNNNNRTG | 1 cut(s) | 83 |
| Mva1269I | GAATGC | 2 cut(s) | 136, 361 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 35, 107, 224, 317 |
| NdeI | CATATG | 1 cut(s) | 121 |
| NlaIII | CATG | 1 cut(s) | 68 |
| NmuCI | GTSAC | 2 cut(s) | 176, 219 |
| NspI | RCATGY | 1 cut(s) | 68 |
| OliI | CACNNNNGTG | 1 cut(s) | 83 |
| PctI | GAATGC | 2 cut(s) | 136, 361 |
| PkrI | GCNGC | 3 cut(s) | 313, 316, 319 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| PspFI | CCCAGC | 1 cut(s) | 320 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| RseI | CAYNNNNRTG | 1 cut(s) | 83 |
| SaqAI | TTAA | 1 cut(s) | 344 |
| SatI | GCNGC | 3 cut(s) | 312, 315, 318 |
| SchI | GAGTC | 1 cut(s) | 211 |
| SetI | ASST | 4 cut(s) | 34, 103, 232, 264 |
| SfcI | CTRYAG | 1 cut(s) | 27 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 83 |
| Sse9I | AATT | 3 cut(s) | 93, 211, 347 |
| SsiI | CCGC | 1 cut(s) | 291 |
| SspMI | CTAG | 1 cut(s) | 35 |
| TaaI | ACNGT | 1 cut(s) | 284 |
| TasI | AATT | 3 cut(s) | 93, 211, 347 |
| Tru1I | TTAA | 1 cut(s) | 344 |
| Tru9I | TTAA | 1 cut(s) | 344 |
| TscAI | CASTG | 1 cut(s) | 88 |
| TseFI | GTSAC | 2 cut(s) | 176, 219 |
| TseI | GCWGC | 3 cut(s) | 311, 314, 317 |
| Tsp45I | GTSAC | 2 cut(s) | 176, 219 |
| TspDTI | ATGAA | 1 cut(s) | 255 |
| TspRI | CASTG | 1 cut(s) | 88 |
| XapI | RAATTY | 1 cut(s) | 347 |
| XceI | RCATGY | 1 cut(s) | 68 |
| XspI | CTAG | 1 cut(s) | 35 |