Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0007451

Physical Location & Seq

Genomic Coordinates Forward (+)

30340614 .. 30344968

Gene Structure 4355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023947

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAGCCAAAGATTGTTTCTTTCTCTAATCCGTCGTCCTCCATCGCCATCCCTCTCGTTTTACCTTAAACCCAAAACCCTACACCCTATTTCCACCCACCTCAATTACACCCACCTTCTTTCCCAACCCCCAAAACCCCAAAATCAGGTCCCAAATTCTAGACCCTTCCACTCCCTCAAACCCTTCATTCTCTCCCAGAGAAAGCCCATCCTCCTGGGCTGGCTCTGCAGCCTCGTCTCCGTCTACTCACTCTCCCAAATTGTCCCCAAAATCGGATATTTATCTGCCCAAATCGGAAGCTTGGACCCAGCCACGTTGCAAAATGAGGGCTTGGCTTTGGGGGTTTTGGTCCTGGCGAGGATCGTCGGCGTCTATTGGCAGCAGGCGTTTCTCTGGGAGGCTGCATTGAACGCGGCGTTTCGGGTTCGGGTTCATGTGTGGGAGAAGGTTGTGGAGAGGGACTTGGGGTTTTTCGAAGGGGCCGGGGCGAAACAGAGTGGGGATGTTGCTTATAGGATCACTGCTGAGGCCGCGGATGTTGCGGATACTGTGTATGCTGTTCTCAATACTGTTGTACCCAGTGCTCTGCAGATATCGGTTATGGCGGCGAAGATGGTGGCCATTAGTCCTGTGTTGTCAGGGATTTCAGCTGTGGTGATTCCATGTATGGCTCTTGTCATTGCTTATCTCGGTGAGAAACTCCGAACAATATCTAACAAGGCCCAGCTCAGCACGGCTGCTCTCTCTGCTTATCTGAATGAGGTCCTCCCTGCAATTCTATTTGTGAAAGCAAGCAATGCAGAGTTGTGGGAGAATGCTAGGTTTAAGAAGCTTGCTCACACTGACCTCTGTGAGCATTTGAAAAAGAAGAAAATGAAGGCACTTATTCCTCAGATCATACAGATTATATATTTTGGAGGGCTTTCTATGCTGTGTGCTGGTCCAATGGTGTTGTGTAGTAGTTCAATCGATATCTCTGGCATAGTTTCATTTGTAACATCATTGATTTTTCTGATTGATCCAATTCAGGGTGTTGGAAAAGCATACAATGAGTTGAAGCAAGGAGAACCCGCTATGGAACGGTTGTTTGACCTGACCAGGTTCAAATCAATGATGATGGAGAATCCAGATGCTATTGATTTAAACCGCGCTACAGGGGAGGTGAAATTTTGTGATGTATCATTTAAATATGGAGAGAATTCCCCTCATGTTCTGAATGGATTGAATCTGCATATTAAAGCTGGAGAGACAGTTGCTCTTGTTGGACCCTCTGGAGGAGGAAAGACAACCCTTATAAAACTACTTCTTCGGCTTTATGATCCTTTGTCTGGTCGTATACTCATTGATAACCATAACATCAAAAACATCAGGTTGACAAGTTTGAGGAGAAATATTGGCCTCGTTTCTCAGGAAATAACATTATTTTCAGGCACTGTTGCCGAGAACATTGGATATAAGGATCTGATGACAAAAATTGACATGGAAATGGTAGAAAATGCAGCAAGAACTGCAAATGCAGATGAGTTTATCAAGAAACTTCCAGAAGGATACAATACCGATATAGGACCAAGGGGCTCAACTTTGAGTGGAGGTCAGAAGCAAAGACTAGCTATTGCAAGGGCTCTCTATCATAGTTCTTCAATATTAATTTTGGATGAAGCTACTTCTGCTTTAGATAGCAGGTCTGAGATTTTGGTGAGACAAGCTGTCGAACGCATGATGGAAAACCGCACGGTCCTGGTTATTGCTCATCGGTTAGAAACCGTTCTGATGGCTAAACGAGTATTTCTTTTAAATGATGGAAAACTTGAAGAGCTAACCCGCTCAGATCTTTTGGGTGGTCAGCACGTGTCAATGGGGCTTGTGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

624

Amino Acids

68.4

Weight (kDa)

9.27

Isoelectric Point (pI)

36.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	102 - 341	2.1e-19	ABC transporter transmembrane region
ABC_tran	PF00005	405 - 556	7.8e-36	ABC transporter
SMC_N	PF02463	448 - 596	3.3e-06	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03910
fragaria_vesca	FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080
malus_domestica	MD12G1026900.v1.1
prunus_persica	Prupe.7G104700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0474121
rosa_laevigata	RLG00000023947
rosa_multiflora	Rmu_sc0004507.1_g000031
rosa_roxburghii	Rroxscaffold_6G00407460
rosa_rugosa	Rorug03G0138800
rosa_samantha	Rh3AG189000 Rh3BG218400 Rh3CG214100 Rh3DG213600
rosa_wichuraiana	Rw3G017280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1295
Acc36I	ACCTGC	1 cut(s)	1671
AccBSI	CCGCTC	1 cut(s)	1824
AccI	GTMKAC	2 cut(s)	243, 1336
AccII	CGCG	3 cut(s)	413, 533, 1149
AciI	CCGC	9 cut(s)	413, 531, 533, 542, 605, 1071, 1147, 1729, 1822
AclWI	GGATC	5 cut(s)	368, 524, 1013, 1313, 1467
AcoI	YGGCCR	1 cut(s)	618
AcsI	RAATTY	3 cut(s)	154, 1166, 1198
AcvI	CACGTG	1 cut(s)	1849
AcyI	GRCGYC	1 cut(s)	369
AfaI	GTAC	1 cut(s)	576
AfiI	CCNNNNNNNGG	5 cut(s)	145, 272, 1028, 1274, 1328
AflIII	ACRYGT	1 cut(s)	1848
AgsI	TTSAA	8 cut(s)	409, 862, 966, 1057, 1105, 1225, 1641, 1811
AhdI	GACNNNNNGTC	1 cut(s)	1706
AjnI	CCWGG	4 cut(s)	213, 351, 1097, 1737
AjuI	GAANNNNNNNTTGG	1 cut(s)	32
AluBI	AGCT	9 cut(s)	300, 650, 727, 832, 1241, 1610, 1661, 1706, 1816
AluI	AGCT	9 cut(s)	300, 650, 727, 832, 1241, 1610, 1661, 1706, 1816
Alw21I	GWGCWC	1 cut(s)	586
Alw26I	GTCTC	3 cut(s)	241, 1241, 1693
AlwI	GGATC	5 cut(s)	368, 524, 1013, 1313, 1467
AlwNI	CAGNNNCTG	1 cut(s)	1433
AoxI	GGCC	5 cut(s)	480, 528, 618, 720, 1396
ApeKI	GCWGC	5 cut(s)	228, 379, 401, 737, 1499
ApoI	RAATTY	3 cut(s)	154, 1166, 1198
AseI	ATTAAT	1 cut(s)	1646
Asp700I	GAANNNNTTC	1 cut(s)	1764
AspLEI	GCGC	1 cut(s)	1151
AsuC2I	CCSGG	1 cut(s)	484
AsuHPI	GGTGA	4 cut(s)	667, 704, 1174, 1708
AsuII	TTCGAA	1 cut(s)	474
AvaII	GGWCC	8 cut(s)	148, 304, 349, 763, 941, 1265, 1565, 1735
BaeI	ACNNNNGTAYC	2 cut(s)	558, 591
BalI	TGGCCA	1 cut(s)	620
BanII	GRGCYC	2 cut(s)	1577, 1624
BbrPI	CACGTG	1 cut(s)	1849
Bbv12I	GWGCWC	1 cut(s)	586
BbvCI	CCTCAGC	1 cut(s)	525
BbvI	GCAGC	5 cut(s)	240, 388, 391, 724, 1511
BccI	CCATC	8 cut(s)	49, 55, 215, 607, 1111, 1714, 1765, 1793
BceAI	ACGGC	1 cut(s)	750
BciT130I	CCWGG	4 cut(s)	215, 353, 1099, 1739
BciVI	GTATCC	2 cut(s)	538, 1541
BcnI	CCSGG	1 cut(s)	484
BcoDI	GTCTC	3 cut(s)	241, 1241, 1693
BfaI	CTAG	3 cut(s)	159, 819, 1607
BfmI	CTRYAG	3 cut(s)	226, 587, 1152
BfuAI	ACCTGC	1 cut(s)	1671
BfuI	GTATCC	2 cut(s)	538, 1541
BglII	AGATCT	1 cut(s)	1828
BisI	GCNGC	8 cut(s)	229, 380, 402, 414, 531, 606, 738, 1500
BlpI	GCTNAGC	1 cut(s)	728
BlsI	GCNGC	8 cut(s)	230, 381, 403, 415, 532, 607, 739, 1501
Bme1390I	CCNGG	5 cut(s)	215, 353, 484, 1099, 1739
Bme18I	GGWCC	8 cut(s)	148, 304, 349, 763, 941, 1265, 1565, 1735
BmeRI	GACNNNNNGTC	1 cut(s)	1706
BmiI	GGNNCC	4 cut(s)	150, 306, 481, 1267
BmrFI	CCNGG	5 cut(s)	215, 353, 484, 1099, 1739
BmrI	ACTGGG	1 cut(s)	573
BmsI	GCATC	1 cut(s)	1120
BmuI	ACTGGG	1 cut(s)	573
BpmI	CTGGAG	2 cut(s)	1263, 1293
Bpu10I	CCTNAGC	1 cut(s)	525
Bpu1102I	GCTNAGC	1 cut(s)	728
Bpu14I	TTCGAA	1 cut(s)	474
BpuMI	CCSGG	1 cut(s)	484
Bsa29I	ATCGAT	1 cut(s)	969
BsaAI	YACGTR	1 cut(s)	1849
BsaBI	GATNNNNATC	1 cut(s)	280
BsaHI	GRCGYC	1 cut(s)	369
BsaJI	CCNNGG	4 cut(s)	214, 483, 531, 1568
BsaXI	ACNNNNNCTCC	4 cut(s)	236, 266, 1236, 1266
Bsc4I	CCNNNNNNNGG	5 cut(s)	145, 272, 1028, 1274, 1328
Bse1I	ACTGG	1 cut(s)	579
Bse3DI	GCAATG	2 cut(s)	678, 802
Bse8I	GATNNNNATC	1 cut(s)	280
BseBI	CCWGG	4 cut(s)	215, 353, 1099, 1739
BseCI	ATCGAT	1 cut(s)	969
BseDI	CCNNGG	4 cut(s)	214, 483, 531, 1568
BseGI	GGATG	5 cut(s)	47, 207, 508, 541, 1660
BseJI	GATNNNNATC	1 cut(s)	280
BseLI	CCNNNNNNNGG	5 cut(s)	145, 272, 1028, 1274, 1328
BseMI	GCAATG	2 cut(s)	678, 802
BseMII	CTCAG	6 cut(s)	516, 742, 905, 1421, 1677, 1839
BseNI	ACTGG	1 cut(s)	579
BseRI	GAGGAG	2 cut(s)	1290, 1399
BseXI	GCAGC	5 cut(s)	240, 388, 391, 724, 1511
BseYI	CCCAGC	2 cut(s)	307, 723
Bsh1236I	CGCG	3 cut(s)	413, 533, 1149
BshFI	GGCC	5 cut(s)	482, 530, 620, 722, 1398
BshVI	ATCGAT	1 cut(s)	969
BsiHKAI	GWGCWC	1 cut(s)	586
BsiSI	CCGG	1 cut(s)	483
BslFI	GGGAC	3 cut(s)	134, 248, 473
BslI	CCNNNNNNNGG	5 cut(s)	145, 272, 1028, 1274, 1328
BsmAI	GTCTC	3 cut(s)	241, 1241, 1693
BsmBI	CGTCTC	1 cut(s)	241
BsmFI	GGGAC	3 cut(s)	134, 248, 473
BsmI	GAATGC	1 cut(s)	820
BsnI	GGCC	5 cut(s)	482, 530, 620, 722, 1398
Bsp119I	TTCGAA	1 cut(s)	474
Bsp1286I	GDGCHC	3 cut(s)	586, 1577, 1624
Bsp143I	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
Bsp1720I	GCTNAGC	1 cut(s)	728
BspACI	CCGC	9 cut(s)	413, 531, 533, 542, 605, 1071, 1147, 1729, 1822
BspANI	GGCC	5 cut(s)	482, 530, 620, 722, 1398
BspCNI	CTCAG	6 cut(s)	517, 741, 904, 1420, 1678, 1838
BspDI	ATCGAT	1 cut(s)	969
BspFNI	CGCG	3 cut(s)	413, 533, 1149
BspLI	GGNNCC	4 cut(s)	150, 306, 481, 1267
BspMAI	CTGCAG	2 cut(s)	230, 591
BspMI	ACCTGC	1 cut(s)	1671
BspPI	GGATC	5 cut(s)	368, 524, 1013, 1313, 1467
BspQI	GCTCTTC	1 cut(s)	1806
BspT104I	TTCGAA	1 cut(s)	474
BsrBI	CCGCTC	1 cut(s)	1824
BsrDI	GCAATG	2 cut(s)	678, 802
BsrI	ACTGG	1 cut(s)	579
BssECI	CCNNGG	4 cut(s)	214, 483, 531, 1568
BssMI	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
BssNAI	GTATAC	1 cut(s)	1337
BssNI	GRCGYC	1 cut(s)	369
BssT1I	CCWWGG	1 cut(s)	1568
Bst1107I	GTATAC	1 cut(s)	1337
Bst2UI	CCWGG	4 cut(s)	215, 353, 1099, 1739
Bst4CI	ACNGT	7 cut(s)	550, 571, 1083, 1252, 1435, 1735, 1765
Bst6I	CTCTTC	1 cut(s)	1806
BstACI	GRCGYC	1 cut(s)	369
BstAPI	GCANNNNNTGC	2 cut(s)	797, 1508
BstBAI	YACGTR	1 cut(s)	1849
BstBI	TTCGAA	1 cut(s)	474
BstC8I	GCNNGC	4 cut(s)	221, 384, 793, 834
BstDEI	CTNAG	6 cut(s)	525, 728, 891, 1407, 1686, 1825
BstDSI	CCRYGG	1 cut(s)	531
BstF5I	GGATG	5 cut(s)	47, 207, 508, 541, 1660
BstFNI	CGCG	3 cut(s)	413, 533, 1149
BstHHI	GCGC	1 cut(s)	1151
BstKTI	GATC	7 cut(s)	363, 519, 897, 1021, 1321, 1462, 1831
BstMAI	GTCTC	3 cut(s)	241, 1241, 1693
BstMBI	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
BstMWI	GCNNNNNNNGC	9 cut(s)	225, 410, 530, 539, 746, 797, 928, 1508, 1667
BstNI	CCWGG	4 cut(s)	215, 353, 1099, 1739
BstSCI	CCNGG	5 cut(s)	213, 351, 482, 1097, 1737
BstSFI	CTRYAG	3 cut(s)	226, 587, 1152
BstUI	CGCG	3 cut(s)	413, 533, 1149
BstV1I	GCAGC	5 cut(s)	240, 388, 391, 724, 1511
BstX2I	RGATCY	2 cut(s)	1459, 1828
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstYI	RGATCY	2 cut(s)	1459, 1828
BstZ17I	GTATAC	1 cut(s)	1337
Bsu15I	ATCGAT	1 cut(s)	969
BsuI	GTATCC	2 cut(s)	538, 1541
BsuRI	GGCC	5 cut(s)	482, 530, 620, 722, 1398
BsuTUI	ATCGAT	1 cut(s)	969
BtgI	CCRYGG	1 cut(s)	531
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	5 cut(s)	47, 207, 508, 541, 1660
BtsI	GCAGTG	1 cut(s)	519
BtsIMutI	CAGTG	4 cut(s)	519, 586, 840, 1431
BveI	ACCTGC	1 cut(s)	1671
Cac8I	GCNNGC	4 cut(s)	221, 384, 793, 834
CaiI	CAGNNNCTG	1 cut(s)	1433
CfoI	GCGC	1 cut(s)	1151
Cfr42I	CCGCGG	1 cut(s)	534
ClaI	ATCGAT	1 cut(s)	969
CseI	GACGC	1 cut(s)	358
CsiI	ACCWGGT	1 cut(s)	1097
Csp6I	GTAC	1 cut(s)	575
CviAII	CATG	5 cut(s)	434, 663, 1208, 1480, 1717
CviQI	GTAC	1 cut(s)	575
DdeI	CTNAG	6 cut(s)	525, 728, 891, 1407, 1686, 1825
DpnI	GATC	7 cut(s)	362, 518, 896, 1020, 1320, 1461, 1830
DpnII	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
DraI	TTTAAA	3 cut(s)	1143, 1186, 1794
DriI	GACNNNNNGTC	1 cut(s)	1706
EaeI	YGGCCR	1 cut(s)	618
Eam1104I	CTCTTC	1 cut(s)	1806
Eam1105I	GACNNNNNGTC	1 cut(s)	1706
EarI	CTCTTC	1 cut(s)	1806
Eco130I	CCWWGG	1 cut(s)	1568
Eco24I	GRGCYC	2 cut(s)	1577, 1624
Eco32I	GATATC	2 cut(s)	594, 973
Eco47I	GGWCC	8 cut(s)	148, 304, 349, 763, 941, 1265, 1565, 1735
Eco72I	CACGTG	1 cut(s)	1849
EcoO109I	RGGNCCY	2 cut(s)	148, 763
EcoRI	GAATTC	1 cut(s)	1198
EcoRII	CCWGG	4 cut(s)	213, 351, 1097, 1737
EcoRV	GATATC	2 cut(s)	594, 973
EcoT14I	CCWWGG	1 cut(s)	1568
EcoT38I	GRGCYC	2 cut(s)	1577, 1624
ErhI	CCWWGG	1 cut(s)	1568
Esp3I	CGTCTC	1 cut(s)	241
FaeI	CATG	5 cut(s)	437, 666, 1211, 1483, 1720
FaqI	GGGAC	3 cut(s)	134, 248, 473
FatI	CATG	5 cut(s)	433, 662, 1207, 1479, 1716
FauI	CCCGC	2 cut(s)	1078, 1829
FblI	GTMKAC	2 cut(s)	243, 1336
Fnu4HI	GCNGC	8 cut(s)	229, 380, 402, 414, 531, 606, 738, 1500
FokI	GGATG	5 cut(s)	34, 194, 515, 548, 1667
FriOI	GRGCYC	2 cut(s)	1577, 1624
Fsp4HI	GCNGC	8 cut(s)	229, 380, 402, 414, 531, 606, 738, 1500
FspBI	CTAG	3 cut(s)	159, 819, 1607
GlaI	GCGC	1 cut(s)	1150
GluI	GCNGC	8 cut(s)	229, 380, 402, 414, 531, 606, 738, 1500
GsaI	CCCAGC	2 cut(s)	311, 727
GsuI	CTGGAG	2 cut(s)	1263, 1293
HaeIII	GGCC	5 cut(s)	482, 530, 620, 722, 1398
HapII	CCGG	1 cut(s)	483
HgaI	GACGC	1 cut(s)	358
HhaI	GCGC	1 cut(s)	1151
Hin1I	GRCGYC	1 cut(s)	369
Hin1II	CATG	5 cut(s)	437, 666, 1211, 1483, 1720
Hin6I	GCGC	1 cut(s)	1149
HinP1I	GCGC	1 cut(s)	1149
HincII	GTYRAC	1 cut(s)	1374
HindII	GTYRAC	1 cut(s)	1374
HindIII	AAGCTT	2 cut(s)	298, 830
HinfI	GANTC	3 cut(s)	658, 1123, 1225
HpaII	CCGG	1 cut(s)	483
HphI	GGTGA	4 cut(s)	667, 704, 1174, 1708
Hpy166II	GTNNAC	3 cut(s)	244, 1337, 1374
Hpy188III	TCNNGA	6 cut(s)	159, 1127, 1272, 1409, 1531, 1541
Hpy8I	GTNNAC	3 cut(s)	244, 1337, 1374
Hpy99I	CGWCG	2 cut(s)	36, 368
HpyAV	CCTTC	7 cut(s)	125, 175, 193, 439, 470, 871, 1538
HpyCH4III	ACNGT	7 cut(s)	550, 571, 1083, 1252, 1435, 1735, 1765
HpyCH4IV	ACGT	2 cut(s)	314, 1848
HpyF10VI	GCNNNNNNNGC	9 cut(s)	225, 410, 530, 539, 746, 797, 928, 1508, 1667
HpyF3I	CTNAG	6 cut(s)	525, 728, 891, 1407, 1686, 1825
HpySE526I	ACGT	2 cut(s)	314, 1848
Hsp92I	GRCGYC	1 cut(s)	369
Hsp92II	CATG	5 cut(s)	437, 666, 1211, 1483, 1720
HspAI	GCGC	1 cut(s)	1149
KspI	CCGCGG	1 cut(s)	534
Kzo9I	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
LguI	GCTCTTC	1 cut(s)	1806
Lsp1109I	GCAGC	5 cut(s)	240, 388, 391, 724, 1511
LweI	GCATC	1 cut(s)	1120
MabI	ACCWGGT	1 cut(s)	1097
MaeI	CTAG	3 cut(s)	159, 819, 1607
MaeII	ACGT	2 cut(s)	314, 1848
MaeIII	GTNAC	2 cut(s)	994, 1864
MalI	GATC	7 cut(s)	362, 518, 896, 1020, 1320, 1461, 1830
MbiI	CCGCTC	1 cut(s)	1824
MboI	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
MboII	GAAGA	5 cut(s)	622, 880, 1298, 1629, 1823
MflI	RGATCY	2 cut(s)	1459, 1828
MhlI	GDGCHC	3 cut(s)	586, 1577, 1624
MlsI	TGGCCA	1 cut(s)	620
MluCI	AATT	9 cut(s)	103, 154, 258, 774, 1023, 1166, 1198, 1473, 1647
MluNI	TGGCCA	1 cut(s)	620
MmeI	TCCRAC	2 cut(s)	1015, 1243
Mox20I	TGGCCA	1 cut(s)	620
MroXI	GAANNNNTTC	1 cut(s)	1764
MscI	TGGCCA	1 cut(s)	620
MseI	TTAA	7 cut(s)	66, 825, 1142, 1185, 1236, 1646, 1793
MslI	CAYNNNNRTG	1 cut(s)	1484
Msp20I	TGGCCA	1 cut(s)	620
MspA1I	CMGCKG	2 cut(s)	533, 650
MspI	CCGG	1 cut(s)	483
MspR9I	CCNGG	5 cut(s)	215, 353, 484, 1099, 1739
Mva1269I	GAATGC	1 cut(s)	820
MvaI	CCWGG	4 cut(s)	215, 353, 1099, 1739
MvnI	CGCG	3 cut(s)	413, 533, 1149
MwoI	GCNNNNNNNGC	9 cut(s)	225, 410, 530, 539, 746, 797, 928, 1508, 1667
NciI	CCSGG	1 cut(s)	484
NdeII	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
NlaIII	CATG	5 cut(s)	437, 666, 1211, 1483, 1720
NlaIV	GGNNCC	4 cut(s)	150, 306, 481, 1267
NmeAIII	GCCGAG	1 cut(s)	1465
NmuCI	GTSAC	1 cut(s)	1864
NspV	TTCGAA	1 cut(s)	474
PciSI	GCTCTTC	1 cut(s)	1806
PctI	GAATGC	1 cut(s)	820
PdmI	GAANNNNTTC	1 cut(s)	1764
PfeI	GAWTC	3 cut(s)	658, 1123, 1225
PkrI	GCNGC	8 cut(s)	230, 381, 403, 415, 532, 607, 739, 1501
PmaCI	CACGTG	1 cut(s)	1849
PmlI	CACGTG	1 cut(s)	1849
Ppu21I	YACGTR	1 cut(s)	1849
PpuMI	RGGWCCY	2 cut(s)	148, 763
PshBI	ATTAAT	1 cut(s)	1646
PsiI	TTATAA	1 cut(s)	1295
Psp5II	RGGWCCY	2 cut(s)	148, 763
Psp6I	CCWGG	4 cut(s)	213, 351, 1097, 1737
PspCI	CACGTG	1 cut(s)	1849
PspFI	CCCAGC	2 cut(s)	307, 723
PspGI	CCWGG	4 cut(s)	213, 351, 1097, 1737
PspN4I	GGNNCC	4 cut(s)	150, 306, 481, 1267
PspPPI	RGGWCCY	2 cut(s)	148, 763
PstI	CTGCAG	2 cut(s)	230, 591
PstNI	CAGNNNCTG	1 cut(s)	1433
PsuI	RGATCY	2 cut(s)	1459, 1828
PvuII	CAGCTG	1 cut(s)	650
RsaI	GTAC	1 cut(s)	576
RsaNI	GTAC	1 cut(s)	575
RseI	CAYNNNNRTG	1 cut(s)	1484
SacII	CCGCGG	1 cut(s)	534
SapI	GCTCTTC	1 cut(s)	1806
SaqAI	TTAA	7 cut(s)	66, 825, 1142, 1185, 1236, 1646, 1793
SatI	GCNGC	8 cut(s)	229, 380, 402, 414, 531, 606, 738, 1500
Sau3AI	GATC	7 cut(s)	360, 516, 894, 1018, 1318, 1459, 1828
ScrFI	CCNGG	5 cut(s)	215, 353, 484, 1099, 1739
SduI	GDGCHC	3 cut(s)	586, 1577, 1624
SexAI	ACCWGGT	1 cut(s)	1097
SfaNI	GCATC	1 cut(s)	1120
SfcI	CTRYAG	3 cut(s)	226, 587, 1152
Sfr303I	CCGCGG	1 cut(s)	534
SfuI	TTCGAA	1 cut(s)	474
SgrBI	CCGCGG	1 cut(s)	534
SinI	GGWCC	8 cut(s)	148, 304, 349, 763, 941, 1265, 1565, 1735
SmiI	ATTTAAAT	1 cut(s)	1186
SmiMI	CAYNNNNRTG	1 cut(s)	1484
Sse9I	AATT	9 cut(s)	103, 154, 258, 774, 1023, 1166, 1198, 1473, 1647
SsiI	CCGC	9 cut(s)	413, 531, 533, 542, 605, 1071, 1147, 1729, 1822
SspI	AATATT	2 cut(s)	1393, 1644
SspMI	CTAG	3 cut(s)	159, 819, 1607
StyD4I	CCNGG	5 cut(s)	213, 351, 482, 1097, 1737
StyI	CCWWGG	1 cut(s)	1568
SwaI	ATTTAAAT	1 cut(s)	1186
TaaI	ACNGT	7 cut(s)	550, 571, 1083, 1252, 1435, 1735, 1765
TaiI	ACGT	2 cut(s)	317, 1851
TaqI	TCGA	3 cut(s)	474, 969, 1710
TasI	AATT	9 cut(s)	103, 154, 258, 774, 1023, 1166, 1198, 1473, 1647
TauI	GCSGC	3 cut(s)	416, 533, 608
TfiI	GAWTC	3 cut(s)	658, 1123, 1225
Tru1I	TTAA	7 cut(s)	66, 825, 1142, 1185, 1236, 1646, 1793
Tru9I	TTAA	7 cut(s)	66, 825, 1142, 1185, 1236, 1646, 1793
TscAI	CASTG	4 cut(s)	526, 586, 847, 1438
TseFI	GTSAC	1 cut(s)	1864
TseI	GCWGC	5 cut(s)	228, 379, 401, 737, 1499
Tsp45I	GTSAC	1 cut(s)	1864
TspDTI	ATGAA	5 cut(s)	175, 422, 890, 978, 1671
TspGWI	ACGGA	2 cut(s)	20, 229
TspRI	CASTG	4 cut(s)	526, 586, 847, 1438
VpaK11BI	GGWCC	8 cut(s)	148, 304, 349, 763, 941, 1265, 1565, 1735
VspI	ATTAAT	1 cut(s)	1646
XapI	RAATTY	3 cut(s)	154, 1166, 1198
XbaI	TCTAGA	1 cut(s)	158
XmiI	GTMKAC	2 cut(s)	243, 1336
XmnI	GAANNNNTTC	1 cut(s)	1764
XspI	CTAG	3 cut(s)	159, 819, 1607

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.