Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0007451

Physical Location & Seq

Genomic Coordinates Reverse (-)

19733354 .. 19737745

Gene Structure 4392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG213600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGAGCCAAAGATTGTTTCTTTCTCTAATCCGTCGTCCTCCATCGCCATCCCTCTCGTTTTACCTTAAACCCAAAACCCTATACCCTATTTCCACCCACCTCCTCAATTACACCCACCTTCTTTCCCAACCCCCAAAACCCCAAAATCAGGTCCCAGATTCTAGACCCATCCACTCCCTCACATCCCTCAAACCCTTCATTCTCTCCGAGAAAAAGCCCATCCTCCTGGGCTGGCTCTGCAGCCTCGTCTCCGTCTACTCTCTCTCCCAAATTGTCCCCAAAATCGGATATTTATCTGCCCAAATCGGAAGTTTGGACCCAGCCACGTTGCAAAATGAGGGCTTGGCTTTGGGGGTTTTGGCCCTGGCGAGGATCGTCGGCGTCTATTGGCAGCAGGCGTTTCTATGGGAGGCCGCATTGAGCGCGTCGTTTCGGGTTCGGGTTCATGTGTGGGAGAAGGTTCTGGAGAGGGACTTGGGGTTTTTCGAAGGGGCCGGGGCGAAGCAGAGTGGGGATGTTGCTTATAGGATCACTGCTGAGGCCTCGGATGTTGCGGATACTGTGTATGCTGTTCTCAATACTGTGGTACCCAGTGCTCTGCAGATATCCGTTATGGCGGCGAAGATGGTGGCCATTAGTCCTGTGTTGTCTGGGATTTCAGCTGTGGTGATTCCATGTACGGCTCTTGTCATTGCTTATCTCGGTGAGAAACTTCGAACAATATCTAACAAGGCCCAGCTCAGCACGGCTGCTCTCTCTGCTTATCTGAATGAGGTCCTCCCTGCAATTCTGTTTGTGAAAGCAAGCAATGCAGAGTTGTGGGAGAATGCTAGGTTTAAGAAGCTTGCTCACACTGACCTCTGTGAGCGTTTGAAAAAGAAGAAAATGAAGGCACTTATTCCTCAGATCATACAGATTATATATTTTGGAGGGCTTTCTATGCTGTGTGTTGGTCCAATGGTGTTGTGTAGTAGCTCAATCGATATCTCTGGCATGGTTTCATTTGTAACATCATTGATTTTTCTCATCGATCCAATTCAGGGTGTTGGAAAAGCATACAATGAGTTGAAGCAAGGAGAACCAGCTATGGAACGGTTGTTTGACCTGACCAGGTTCAAATCAACGATGATGGAGAATCCAGATGCTATTGATTTAAACCGCGCTACAGGGGAGGTGAAATTTTGTGATGTATCATTTAAATATGGAGAGAATTCCCCTCATGTTCTGAATGGATTGAATCTGCATATTAAAGCTGGAGAGACAGTTGCTGTTGTTGGACCCTCTGGAGGAGGAAAGACAACCCTTATAAAACTACTTCTTCGGCTTTATGATCCTTTGTCTGGTCGTATACTCATTGATAACCATAACATCAAAAACATCAGGTTGACAAGTTTGAGGAGAAACATTGGCCTCGTTTCTCAGGAAATAACATTATTTTCAGGCACTGTTGCCGAGAACATTGGATATAAGGATCTGATGACAAAAATTGACATGGAAATGGTAGAAAATGCAGCAAGAACTGCAAATGCAGATGAGTTTATCAAGAAACTTCCAGAAGGATACAATACTGACATAGGACCAAGGGGCTCAACTTTGAGTGGAGGTCAGAAGCAAAGACTAGCTATTGCAAGGGCTCTCTATCATAATTCTTCAATATTAATTTTGGATGAAGCTACTTCTGCTTTAGATAGCAGGTCTGAGATTTTGGTGAGACAAGCTGTCGAACGCATGATGGAAAACCGCACGGTCCTGGTTATTGCTCATCGGTTAGAAACCGTTCTGATGGCTAAACGAGTATTCCTTTTAAATGATGGAATACTTGAAGAGCTAACCCGCTCAGATCTTTTGGGTGGTCAGCATGTGTCAATGGGGCTTGTGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

627

Amino Acids

68.77

Weight (kDa)

9.15

Isoelectric Point (pI)

36.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	106 - 344	4.6e-20	ABC transporter transmembrane region
ABC_tran	PF00005	409 - 560	1.1e-35	ABC transporter
SMC_N	PF02463	452 - 599	3.7e-06	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03910
fragaria_vesca	FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080 FvH4_6g19080
malus_domestica	MD12G1026900.v1.1
prunus_persica	Prupe.7G104700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0474121
rosa_laevigata	RLG00000023947
rosa_multiflora	Rmu_sc0004507.1_g000031
rosa_roxburghii	Rroxscaffold_6G00407460
rosa_rugosa	Rorug03G0138800
rosa_samantha	Rh3AG189000 Rh3BG218400 Rh3CG214100 Rh3DG213600
rosa_wichuraiana	Rw3G017280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1307
Acc36I	ACCTGC	1 cut(s)	1683
Acc65I	GGTACC	1 cut(s)	586
AccB1I	GGYRCC	1 cut(s)	586
AccBSI	CCGCTC	1 cut(s)	1836
AccI	GTMKAC	2 cut(s)	255, 1348
AccII	CGCG	2 cut(s)	425, 1161
AciI	CCGC	6 cut(s)	414, 554, 617, 1159, 1741, 1834
AclWI	GGATC	5 cut(s)	380, 536, 1025, 1325, 1479
AcoI	YGGCCR	1 cut(s)	630
AcsI	RAATTY	2 cut(s)	1178, 1210
AcyI	GRCGYC	1 cut(s)	381
AfaI	GTAC	2 cut(s)	588, 679
AfiI	CCNNNNNNNGG	6 cut(s)	148, 284, 369, 1040, 1286, 1340
AgsI	TTSAA	6 cut(s)	874, 1069, 1117, 1237, 1653, 1823
AhdI	GACNNNNNGTC	1 cut(s)	1718
AjnI	CCWGG	4 cut(s)	225, 363, 1109, 1749
AjuI	GAANNNNNNNTTGG	1 cut(s)	32
Alw21I	GWGCWC	1 cut(s)	598
Alw26I	GTCTC	3 cut(s)	253, 1253, 1705
AlwI	GGATC	5 cut(s)	380, 536, 1025, 1325, 1479
AlwNI	CAGNNNCTG	2 cut(s)	1268, 1445
AoxI	GGCC	7 cut(s)	360, 411, 492, 540, 630, 732, 1408
ApeKI	GCWGC	4 cut(s)	240, 391, 749, 1511
ApoI	RAATTY	2 cut(s)	1178, 1210
AseI	ATTAAT	1 cut(s)	1658
Asp700I	GAANNNNTTC	1 cut(s)	1776
Asp718I	GGTACC	1 cut(s)	586
AspLEI	GCGC	2 cut(s)	425, 1163
AsuC2I	CCSGG	1 cut(s)	496
AsuHPI	GGTGA	4 cut(s)	679, 716, 1186, 1720
AsuII	TTCGAA	2 cut(s)	486, 715
AvaII	GGWCC	7 cut(s)	151, 316, 775, 953, 1277, 1577, 1747
BaeI	ACNNNNGTAYC	2 cut(s)	570, 603
BalI	TGGCCA	1 cut(s)	632
BanI	GGYRCC	1 cut(s)	586
BanII	GRGCYC	2 cut(s)	1589, 1636
Bbv12I	GWGCWC	1 cut(s)	598
BbvCI	CCTCAGC	1 cut(s)	537
BbvI	GCAGC	4 cut(s)	252, 403, 736, 1523
BccI	CCATC	9 cut(s)	49, 55, 176, 227, 619, 1123, 1726, 1777, 1805
BceAI	ACGGC	2 cut(s)	696, 762
BciT130I	CCWGG	4 cut(s)	227, 365, 1111, 1751
BciVI	GTATCC	2 cut(s)	550, 1553
BcnI	CCSGG	1 cut(s)	496
BcoDI	GTCTC	3 cut(s)	253, 1253, 1705
BfaI	CTAG	3 cut(s)	162, 831, 1619
BfmI	CTRYAG	3 cut(s)	238, 599, 1164
BfuAI	ACCTGC	1 cut(s)	1683
BfuI	GTATCC	2 cut(s)	550, 1553
BglII	AGATCT	1 cut(s)	1840
BisI	GCNGC	6 cut(s)	241, 392, 414, 618, 750, 1512
BlpI	GCTNAGC	1 cut(s)	740
BlsI	GCNGC	6 cut(s)	242, 393, 415, 619, 751, 1513
Bme1390I	CCNGG	5 cut(s)	227, 365, 496, 1111, 1751
Bme18I	GGWCC	7 cut(s)	151, 316, 775, 953, 1277, 1577, 1747
BmeRI	GACNNNNNGTC	1 cut(s)	1718
BmiI	GGNNCC	5 cut(s)	153, 318, 493, 588, 1279
BmrFI	CCNGG	5 cut(s)	227, 365, 496, 1111, 1751
BmrI	ACTGGG	1 cut(s)	585
BmsI	GCATC	1 cut(s)	1132
BmuI	ACTGGG	1 cut(s)	585
BpmI	CTGGAG	3 cut(s)	485, 1275, 1305
Bpu10I	CCTNAGC	1 cut(s)	537
Bpu1102I	GCTNAGC	1 cut(s)	740
Bpu14I	TTCGAA	2 cut(s)	486, 715
BpuMI	CCSGG	1 cut(s)	496
Bsa29I	ATCGAT	2 cut(s)	981, 1029
BsaBI	GATNNNNATC	1 cut(s)	292
BsaHI	GRCGYC	1 cut(s)	381
BsaJI	CCNNGG	5 cut(s)	226, 363, 495, 543, 1580
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 1248, 1278
Bsc4I	CCNNNNNNNGG	6 cut(s)	148, 284, 369, 1040, 1286, 1340
Bse1I	ACTGG	1 cut(s)	591
Bse3DI	GCAATG	2 cut(s)	690, 814
Bse8I	GATNNNNATC	1 cut(s)	292
BseBI	CCWGG	4 cut(s)	227, 365, 1111, 1751
BseCI	ATCGAT	2 cut(s)	981, 1029
BseDI	CCNNGG	5 cut(s)	226, 363, 495, 543, 1580
BseGI	GGATG	7 cut(s)	47, 168, 182, 219, 520, 553, 1672
BseJI	GATNNNNATC	1 cut(s)	292
BseLI	CCNNNNNNNGG	6 cut(s)	148, 284, 369, 1040, 1286, 1340
BseMI	GCAATG	2 cut(s)	690, 814
BseMII	CTCAG	6 cut(s)	528, 754, 917, 1433, 1689, 1851
BseNI	ACTGG	1 cut(s)	591
BseRI	GAGGAG	3 cut(s)	92, 1302, 1411
BseXI	GCAGC	4 cut(s)	252, 403, 736, 1523
BseYI	CCCAGC	2 cut(s)	319, 735
Bsh1236I	CGCG	2 cut(s)	425, 1161
BshFI	GGCC	7 cut(s)	362, 413, 494, 542, 632, 734, 1410
BshNI	GGYRCC	1 cut(s)	586
BshVI	ATCGAT	2 cut(s)	981, 1029
BsiHKAI	GWGCWC	1 cut(s)	598
BsiSI	CCGG	1 cut(s)	495
BslFI	GGGAC	3 cut(s)	137, 260, 485
BslI	CCNNNNNNNGG	6 cut(s)	148, 284, 369, 1040, 1286, 1340
BsmAI	GTCTC	3 cut(s)	253, 1253, 1705
BsmBI	CGTCTC	1 cut(s)	253
BsmFI	GGGAC	3 cut(s)	137, 260, 485
BsmI	GAATGC	1 cut(s)	832
BsnI	GGCC	7 cut(s)	362, 413, 494, 542, 632, 734, 1410
Bsp119I	TTCGAA	2 cut(s)	486, 715
Bsp1286I	GDGCHC	3 cut(s)	598, 1589, 1636
Bsp143I	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
Bsp1720I	GCTNAGC	1 cut(s)	740
BspACI	CCGC	6 cut(s)	414, 554, 617, 1159, 1741, 1834
BspANI	GGCC	7 cut(s)	362, 413, 494, 542, 632, 734, 1410
BspCNI	CTCAG	6 cut(s)	529, 753, 916, 1432, 1690, 1850
BspDI	ATCGAT	2 cut(s)	981, 1029
BspFNI	CGCG	2 cut(s)	425, 1161
BspLI	GGNNCC	5 cut(s)	153, 318, 493, 588, 1279
BspMAI	CTGCAG	2 cut(s)	242, 603
BspMI	ACCTGC	1 cut(s)	1683
BspPI	GGATC	5 cut(s)	380, 536, 1025, 1325, 1479
BspQI	GCTCTTC	1 cut(s)	1818
BspT104I	TTCGAA	2 cut(s)	486, 715
BspT107I	GGYRCC	1 cut(s)	586
BsrBI	CCGCTC	1 cut(s)	1836
BsrDI	GCAATG	2 cut(s)	690, 814
BsrI	ACTGG	1 cut(s)	591
BssECI	CCNNGG	5 cut(s)	226, 363, 495, 543, 1580
BssMI	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
BssNAI	GTATAC	1 cut(s)	1349
BssNI	GRCGYC	1 cut(s)	381
BssT1I	CCWWGG	1 cut(s)	1580
Bst1107I	GTATAC	1 cut(s)	1349
Bst2UI	CCWGG	4 cut(s)	227, 365, 1111, 1751
Bst4CI	ACNGT	7 cut(s)	562, 583, 1095, 1264, 1447, 1747, 1777
Bst6I	CTCTTC	1 cut(s)	1818
BstACI	GRCGYC	1 cut(s)	381
BstAPI	GCANNNNNTGC	2 cut(s)	809, 1520
BstBI	TTCGAA	2 cut(s)	486, 715
BstC8I	GCNNGC	4 cut(s)	233, 396, 805, 846
BstDEI	CTNAG	6 cut(s)	537, 740, 903, 1419, 1698, 1837
BstF5I	GGATG	7 cut(s)	47, 168, 182, 219, 520, 553, 1672
BstFNI	CGCG	2 cut(s)	425, 1161
BstHHI	GCGC	2 cut(s)	425, 1163
BstKTI	GATC	7 cut(s)	375, 531, 909, 1033, 1333, 1474, 1843
BstMAI	GTCTC	3 cut(s)	253, 1253, 1705
BstMBI	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
BstMWI	GCNNNNNNNGC	7 cut(s)	237, 422, 758, 809, 940, 1520, 1679
BstNI	CCWGG	4 cut(s)	227, 365, 1111, 1751
BstNSI	RCATGY	1 cut(s)	1862
BstSCI	CCNGG	5 cut(s)	225, 363, 494, 1109, 1749
BstSFI	CTRYAG	3 cut(s)	238, 599, 1164
BstUI	CGCG	2 cut(s)	425, 1161
BstV1I	GCAGC	4 cut(s)	252, 403, 736, 1523
BstX2I	RGATCY	2 cut(s)	1471, 1840
BstXI	CCANNNNNNTGG	1 cut(s)	226
BstYI	RGATCY	2 cut(s)	1471, 1840
BstZ17I	GTATAC	1 cut(s)	1349
Bsu15I	ATCGAT	2 cut(s)	981, 1029
BsuI	GTATCC	2 cut(s)	550, 1553
BsuRI	GGCC	7 cut(s)	362, 413, 494, 542, 632, 734, 1410
BsuTUI	ATCGAT	2 cut(s)	981, 1029
BtgZI	GCGATG	1 cut(s)	27
BtsCI	GGATG	7 cut(s)	47, 168, 182, 219, 520, 553, 1672
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	4 cut(s)	531, 598, 852, 1443
BveI	ACCTGC	1 cut(s)	1683
Cac8I	GCNNGC	4 cut(s)	233, 396, 805, 846
CaiI	CAGNNNCTG	2 cut(s)	1268, 1445
CfoI	GCGC	2 cut(s)	425, 1163
ClaI	ATCGAT	2 cut(s)	981, 1029
CseI	GACGC	2 cut(s)	370, 414
CsiI	ACCWGGT	1 cut(s)	1109
Csp6I	GTAC	2 cut(s)	587, 678
CviAII	CATG	7 cut(s)	446, 675, 994, 1220, 1492, 1729, 1859
CviQI	GTAC	2 cut(s)	587, 678
DdeI	CTNAG	6 cut(s)	537, 740, 903, 1419, 1698, 1837
DpnI	GATC	7 cut(s)	374, 530, 908, 1032, 1332, 1473, 1842
DpnII	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
DraI	TTTAAA	3 cut(s)	1155, 1198, 1806
DriI	GACNNNNNGTC	1 cut(s)	1718
EaeI	YGGCCR	1 cut(s)	630
Eam1104I	CTCTTC	1 cut(s)	1818
Eam1105I	GACNNNNNGTC	1 cut(s)	1718
EarI	CTCTTC	1 cut(s)	1818
Eco130I	CCWWGG	1 cut(s)	1580
Eco147I	AGGCCT	1 cut(s)	542
Eco24I	GRGCYC	2 cut(s)	1589, 1636
Eco32I	GATATC	2 cut(s)	606, 985
Eco47I	GGWCC	7 cut(s)	151, 316, 775, 953, 1277, 1577, 1747
EcoO109I	RGGNCCY	2 cut(s)	151, 775
EcoRI	GAATTC	1 cut(s)	1210
EcoRII	CCWGG	4 cut(s)	225, 363, 1109, 1749
EcoRV	GATATC	2 cut(s)	606, 985
EcoT14I	CCWWGG	1 cut(s)	1580
EcoT38I	GRGCYC	2 cut(s)	1589, 1636
ErhI	CCWWGG	1 cut(s)	1580
Esp3I	CGTCTC	1 cut(s)	253
FaeI	CATG	7 cut(s)	449, 678, 997, 1223, 1495, 1732, 1862
FaqI	GGGAC	3 cut(s)	137, 260, 485
FatI	CATG	7 cut(s)	445, 674, 993, 1219, 1491, 1728, 1858
FauI	CCCGC	1 cut(s)	1841
FblI	GTMKAC	2 cut(s)	255, 1348
Fnu4HI	GCNGC	6 cut(s)	241, 392, 414, 618, 750, 1512
FokI	GGATG	7 cut(s)	34, 155, 169, 206, 527, 560, 1679
FriOI	GRGCYC	2 cut(s)	1589, 1636
Fsp4HI	GCNGC	6 cut(s)	241, 392, 414, 618, 750, 1512
FspBI	CTAG	3 cut(s)	162, 831, 1619
GlaI	GCGC	2 cut(s)	424, 1162
GluI	GCNGC	6 cut(s)	241, 392, 414, 618, 750, 1512
GsaI	CCCAGC	2 cut(s)	323, 739
GsuI	CTGGAG	3 cut(s)	485, 1275, 1305
HaeIII	GGCC	7 cut(s)	362, 413, 494, 542, 632, 734, 1410
HapII	CCGG	1 cut(s)	495
HgaI	GACGC	2 cut(s)	370, 414
HhaI	GCGC	2 cut(s)	425, 1163
Hin1I	GRCGYC	1 cut(s)	381
Hin1II	CATG	7 cut(s)	449, 678, 997, 1223, 1495, 1732, 1862
Hin6I	GCGC	2 cut(s)	423, 1161
HinP1I	GCGC	2 cut(s)	423, 1161
HincII	GTYRAC	1 cut(s)	1386
HindII	GTYRAC	1 cut(s)	1386
HindIII	AAGCTT	1 cut(s)	842
HinfI	GANTC	4 cut(s)	158, 670, 1135, 1237
HpaII	CCGG	1 cut(s)	495
HphI	GGTGA	4 cut(s)	679, 716, 1186, 1720
Hpy166II	GTNNAC	3 cut(s)	256, 1349, 1386
Hpy188III	TCNNGA	7 cut(s)	162, 464, 1139, 1284, 1421, 1543, 1553
Hpy8I	GTNNAC	3 cut(s)	256, 1349, 1386
Hpy99I	CGWCG	3 cut(s)	36, 380, 430
HpyAV	CCTTC	6 cut(s)	128, 205, 451, 482, 883, 1550
HpyCH4III	ACNGT	7 cut(s)	562, 583, 1095, 1264, 1447, 1747, 1777
HpyCH4IV	ACGT	1 cut(s)	326
HpyF10VI	GCNNNNNNNGC	7 cut(s)	237, 422, 758, 809, 940, 1520, 1679
HpyF3I	CTNAG	6 cut(s)	537, 740, 903, 1419, 1698, 1837
HpySE526I	ACGT	1 cut(s)	326
Hsp92I	GRCGYC	1 cut(s)	381
Hsp92II	CATG	7 cut(s)	449, 678, 997, 1223, 1495, 1732, 1862
HspAI	GCGC	2 cut(s)	423, 1161
KpnI	GGTACC	1 cut(s)	590
Kzo9I	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
LguI	GCTCTTC	1 cut(s)	1818
Lsp1109I	GCAGC	4 cut(s)	252, 403, 736, 1523
LweI	GCATC	1 cut(s)	1132
MabI	ACCWGGT	1 cut(s)	1109
MaeI	CTAG	3 cut(s)	162, 831, 1619
MaeII	ACGT	1 cut(s)	326
MaeIII	GTNAC	2 cut(s)	1006, 1876
MalI	GATC	7 cut(s)	374, 530, 908, 1032, 1332, 1473, 1842
MbiI	CCGCTC	1 cut(s)	1836
MboI	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
MboII	GAAGA	5 cut(s)	634, 892, 1310, 1641, 1835
MflI	RGATCY	2 cut(s)	1471, 1840
MhlI	GDGCHC	3 cut(s)	598, 1589, 1636
MlsI	TGGCCA	1 cut(s)	632
MluCI	AATT	9 cut(s)	106, 270, 786, 1035, 1178, 1210, 1485, 1645, 1659
MluNI	TGGCCA	1 cut(s)	632
MmeI	TCCRAC	2 cut(s)	1027, 1255
Mox20I	TGGCCA	1 cut(s)	632
MroXI	GAANNNNTTC	1 cut(s)	1776
MscI	TGGCCA	1 cut(s)	632
MseI	TTAA	7 cut(s)	66, 837, 1154, 1197, 1248, 1658, 1805
MslI	CAYNNNNRTG	1 cut(s)	1496
Msp20I	TGGCCA	1 cut(s)	632
MspA1I	CMGCKG	1 cut(s)	662
MspI	CCGG	1 cut(s)	495
MspR9I	CCNGG	5 cut(s)	227, 365, 496, 1111, 1751
Mva1269I	GAATGC	1 cut(s)	832
MvaI	CCWGG	4 cut(s)	227, 365, 1111, 1751
MvnI	CGCG	2 cut(s)	425, 1161
MwoI	GCNNNNNNNGC	7 cut(s)	237, 422, 758, 809, 940, 1520, 1679
NciI	CCSGG	1 cut(s)	496
NdeII	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
NlaIII	CATG	7 cut(s)	449, 678, 997, 1223, 1495, 1732, 1862
NlaIV	GGNNCC	5 cut(s)	153, 318, 493, 588, 1279
NmeAIII	GCCGAG	1 cut(s)	1477
NmuCI	GTSAC	1 cut(s)	1876
NspI	RCATGY	1 cut(s)	1862
NspV	TTCGAA	2 cut(s)	486, 715
PceI	AGGCCT	1 cut(s)	542
PciSI	GCTCTTC	1 cut(s)	1818
PctI	GAATGC	1 cut(s)	832
PdmI	GAANNNNTTC	1 cut(s)	1776
PfeI	GAWTC	4 cut(s)	158, 670, 1135, 1237
PkrI	GCNGC	6 cut(s)	242, 393, 415, 619, 751, 1513
PpuMI	RGGWCCY	2 cut(s)	151, 775
PshBI	ATTAAT	1 cut(s)	1658
PsiI	TTATAA	1 cut(s)	1307
Psp5II	RGGWCCY	2 cut(s)	151, 775
Psp6I	CCWGG	4 cut(s)	225, 363, 1109, 1749
PspFI	CCCAGC	2 cut(s)	319, 735
PspGI	CCWGG	4 cut(s)	225, 363, 1109, 1749
PspN4I	GGNNCC	5 cut(s)	153, 318, 493, 588, 1279
PspPPI	RGGWCCY	2 cut(s)	151, 775
PstI	CTGCAG	2 cut(s)	242, 603
PstNI	CAGNNNCTG	2 cut(s)	1268, 1445
PsuI	RGATCY	2 cut(s)	1471, 1840
PvuII	CAGCTG	1 cut(s)	662
RsaI	GTAC	2 cut(s)	588, 679
RsaNI	GTAC	2 cut(s)	587, 678
RseI	CAYNNNNRTG	1 cut(s)	1496
SapI	GCTCTTC	1 cut(s)	1818
SaqAI	TTAA	7 cut(s)	66, 837, 1154, 1197, 1248, 1658, 1805
SatI	GCNGC	6 cut(s)	241, 392, 414, 618, 750, 1512
Sau3AI	GATC	7 cut(s)	372, 528, 906, 1030, 1330, 1471, 1840
ScrFI	CCNGG	5 cut(s)	227, 365, 496, 1111, 1751
SduI	GDGCHC	3 cut(s)	598, 1589, 1636
SexAI	ACCWGGT	1 cut(s)	1109
SfaNI	GCATC	1 cut(s)	1132
SfcI	CTRYAG	3 cut(s)	238, 599, 1164
SfuI	TTCGAA	2 cut(s)	486, 715
SinI	GGWCC	7 cut(s)	151, 316, 775, 953, 1277, 1577, 1747
SmiI	ATTTAAAT	1 cut(s)	1198
SmiMI	CAYNNNNRTG	1 cut(s)	1496
Sse9I	AATT	9 cut(s)	106, 270, 786, 1035, 1178, 1210, 1485, 1645, 1659
SseBI	AGGCCT	1 cut(s)	542
SsiI	CCGC	6 cut(s)	414, 554, 617, 1159, 1741, 1834
SspI	AATATT	1 cut(s)	1656
SspMI	CTAG	3 cut(s)	162, 831, 1619
StuI	AGGCCT	1 cut(s)	542
StyD4I	CCNGG	5 cut(s)	225, 363, 494, 1109, 1749
StyI	CCWWGG	1 cut(s)	1580
SwaI	ATTTAAAT	1 cut(s)	1198
TaaI	ACNGT	7 cut(s)	562, 583, 1095, 1264, 1447, 1747, 1777
TaiI	ACGT	1 cut(s)	329
TaqI	TCGA	5 cut(s)	486, 715, 981, 1029, 1722
TasI	AATT	9 cut(s)	106, 270, 786, 1035, 1178, 1210, 1485, 1645, 1659
TauI	GCSGC	2 cut(s)	416, 620
TfiI	GAWTC	4 cut(s)	158, 670, 1135, 1237
Tru1I	TTAA	7 cut(s)	66, 837, 1154, 1197, 1248, 1658, 1805
Tru9I	TTAA	7 cut(s)	66, 837, 1154, 1197, 1248, 1658, 1805
TscAI	CASTG	4 cut(s)	538, 598, 859, 1450
TseFI	GTSAC	1 cut(s)	1876
TseI	GCWGC	4 cut(s)	240, 391, 749, 1511
Tsp45I	GTSAC	1 cut(s)	1876
TspDTI	ATGAA	5 cut(s)	187, 434, 902, 990, 1683
TspGWI	ACGGA	3 cut(s)	20, 241, 598
TspRI	CASTG	4 cut(s)	538, 598, 859, 1450
VpaK11BI	GGWCC	7 cut(s)	151, 316, 775, 953, 1277, 1577, 1747
VspI	ATTAAT	1 cut(s)	1658
XapI	RAATTY	2 cut(s)	1178, 1210
XbaI	TCTAGA	1 cut(s)	161
XceI	RCATGY	1 cut(s)	1862
XmiI	GTMKAC	2 cut(s)	255, 1348
XmnI	GAANNNNTTC	1 cut(s)	1776
XspI	CTAG	3 cut(s)	162, 831, 1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.