Rh3CG214100

ABC transporter B family member 29

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
19644473 .. 19651809
7337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG214100.1

Sequence Viewer

Length: 1398 bp
ATGAGCCAAAGATTGTTTCTTTCTCTAATCCGTCGTCCTCCATCGCCATCCCTCTCGTTTTACCTTAAACCCAAAACCCTATACCCTATTTCCACCCACCTCCTCAATTACACCCACCTTCTTTCCCAACCCCCAAAACCCCAAAATCAGGTCCCAGATTCTAGACCCATCCACTCCCTCACATCCCTCAAACCCTTCATTCTCTCCGAGAAAAAGCCCATCCTCCTGGGCTGGCTCTGCAGCCTCGTCTCCGTCTACTCTCTCTCCCAAATTGTCCCCAAAATCGGATATTTATCTGCCCAAATCGGAAGTTTGAACCCAGCCACGTTGCAAAATGAGGGCTTGGCTTTGGGGGTTTTGGTCCTGCCGAGGATCGTCGGCGTCTATTGGCAGCAGGCGTTTCTCTGGGAGGCCGCATTGAACGCGGCGTTTCGGGTTCGGGTTCATGTGTGGGAGAAGGTTCTGGAGAGGGACTTGGGGTTTTTCGAAGGGGCCGGGGCGAAGCAGAGTGGGGATGTTGCTTATAGGATCACTGCTGAGGCCTCGGATGTTGCGGATACTGTGTATGCTGTTCTCAATACTGTGGTACCCAGTGCTCTGCAGATATCCGTTATGGCGGCGAAGATGGTGGCCATTAGTCCTGCGTTGTCTGGGATTTCAGCTGTGGTGATTCCATGTATGGCTCTTGTCATTGCTTATCTCGGTGAGAAACTTCGAACAATATCTAACAAGGCCCAGCTCAGCACGGCTGCTCTCTCTGCTTATCTGAATGAGGTCCTCCCTGCAATTCTGTTTGTGAAAGCAAGCAATGCAGAGTTGTGGGAGAATGCTAGGTTTAAGAAGCTTGCTCACACTGACCTCTGTGAGCGTTTGAAAAAGAAGAAAATGAAGGCACTTATTCCTCAGATCATACAGATTATATATTTTGGAGGGCTTTCTATGCTGTGTGTTGGTCCAATGGTGTTGTGTAGTAGCTCAATCAATATCTCTGGCATAGTTTCATTTGTAACATCATTGATTTTTCTCATCGATCCAATTCAGGGTGTTGGAAAAGCATACAATGAGTTGAAGCAAGGTGAACCAGCTATGGAACGGTTGTTTGACCTGACCAGGTTCAAATCAACGATGATGGAGAATCCAGATGCTATTGATTTAAACCGCGCTACAGGGGAGGTGAAATTTTGTGATGTATCATTTAAATATGGAGAGAATTCCCCTCATGTTCTGAATGGATTGAATCTGCATATTAAAGCTGGAGAGACAGTTGCTCTTGTTGGACCCTCTGGAGGAGGAAAGACAACCCTTATAAAACTACTTCTTCAGCTTTATGATCCTTTGTCTGGTGAGATTTTGCTGCTCTATACTAGCTTGGCAAGAAAACTAGAGAAACTAAAATAG

Protein Analysis

465

Amino Acids

50.89

Weight (kDa)

9.37

Isoelectric Point (pI)

31.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 110 - 344 5.7e-20 ABC transporter transmembrane region
ABC_tran PF00005 409 - 459 1.1e-11 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1307
Acc65I GGTACC 1 cut(s) 586
AccB1I GGYRCC 1 cut(s) 586
AccI GTMKAC 1 cut(s) 255
AccII CGCG 2 cut(s) 425, 1161
AciI CCGC 5 cut(s) 414, 425, 554, 617, 1159
AclWI GGATC 4 cut(s) 380, 536, 1025, 1325
AcoI YGGCCR 1 cut(s) 630
AcsI RAATTY 2 cut(s) 1178, 1210
AcuI CTGAAG 1 cut(s) 1304
AcyI GRCGYC 1 cut(s) 381
AfaI GTAC 1 cut(s) 588
AfiI CCNNNNNNNGG 5 cut(s) 148, 284, 1040, 1286, 1340
AgsI TTSAA 6 cut(s) 316, 421, 874, 1069, 1117, 1237
AjnI CCWGG 2 cut(s) 225, 1109
AjuI GAANNNNNNNTTGG 1 cut(s) 32
AluBI AGCT 8 cut(s) 662, 739, 844, 975, 1085, 1253, 1324, 1368
AluI AGCT 8 cut(s) 662, 739, 844, 975, 1085, 1253, 1324, 1368
Alw21I GWGCWC 1 cut(s) 598
Alw26I GTCTC 2 cut(s) 253, 1253
AlwI GGATC 4 cut(s) 380, 536, 1025, 1325
AoxI GGCC 5 cut(s) 411, 492, 540, 630, 732
ApeKI GCWGC 4 cut(s) 240, 391, 749, 1354
ApoI RAATTY 2 cut(s) 1178, 1210
Asp718I GGTACC 1 cut(s) 586
AspLEI GCGC 1 cut(s) 1163
AspS9I GGNCC 7 cut(s) 151, 361, 492, 733, 775, 953, 1277
AsuC2I CCSGG 1 cut(s) 496
AsuHPI GGTGA 5 cut(s) 679, 716, 1088, 1186, 1355
AsuII TTCGAA 2 cut(s) 486, 715
AvaII GGWCC 5 cut(s) 151, 361, 775, 953, 1277
BaeI ACNNNNGTAYC 2 cut(s) 570, 603
BalI TGGCCA 1 cut(s) 632
BanI GGYRCC 1 cut(s) 586
Bbv12I GWGCWC 1 cut(s) 598
BbvCI CCTCAGC 1 cut(s) 537
BbvI GCAGC 4 cut(s) 252, 403, 736, 1341
BccI CCATC 6 cut(s) 49, 55, 176, 227, 619, 1123
BceAI ACGGC 1 cut(s) 762
BciT130I CCWGG 2 cut(s) 227, 1111
BciVI GTATCC 1 cut(s) 550
BcnI CCSGG 1 cut(s) 496
BcoDI GTCTC 2 cut(s) 253, 1253
BfaI CTAG 4 cut(s) 162, 831, 1365, 1382
BfmI CTRYAG 3 cut(s) 238, 599, 1164
BfuI GTATCC 1 cut(s) 550
BisI GCNGC 7 cut(s) 241, 392, 414, 426, 618, 750, 1355
BlpI GCTNAGC 1 cut(s) 740
BlsI GCNGC 7 cut(s) 242, 393, 415, 427, 619, 751, 1356
Bme1390I CCNGG 3 cut(s) 227, 496, 1111
Bme18I GGWCC 5 cut(s) 151, 361, 775, 953, 1277
BmgT120I GGNCC 7 cut(s) 151, 361, 492, 733, 775, 953, 1277
BmiI GGNNCC 4 cut(s) 153, 493, 588, 1279
BmrFI CCNGG 3 cut(s) 227, 496, 1111
BmrI ACTGGG 1 cut(s) 585
BmsI GCATC 1 cut(s) 1132
BmuI ACTGGG 1 cut(s) 585
BpmI CTGGAG 3 cut(s) 485, 1275, 1305
Bpu10I CCTNAGC 1 cut(s) 537
Bpu1102I GCTNAGC 1 cut(s) 740
Bpu14I TTCGAA 2 cut(s) 486, 715
BpuMI CCSGG 1 cut(s) 496
Bsa29I ATCGAT 1 cut(s) 1029
BsaBI GATNNNNATC 1 cut(s) 292
BsaHI GRCGYC 1 cut(s) 381
BsaJI CCNNGG 4 cut(s) 226, 368, 495, 543
BsaXI ACNNNNNCTCC 4 cut(s) 248, 278, 1248, 1278
Bsc4I CCNNNNNNNGG 5 cut(s) 148, 284, 1040, 1286, 1340
Bse1I ACTGG 1 cut(s) 591
Bse3DI GCAATG 2 cut(s) 690, 814
Bse8I GATNNNNATC 1 cut(s) 292
BseBI CCWGG 2 cut(s) 227, 1111
BseCI ATCGAT 1 cut(s) 1029
BseDI CCNNGG 4 cut(s) 226, 368, 495, 543
BseGI GGATG 6 cut(s) 47, 168, 182, 219, 520, 553
BseJI GATNNNNATC 1 cut(s) 292
BseLI CCNNNNNNNGG 5 cut(s) 148, 284, 1040, 1286, 1340
BseMI GCAATG 2 cut(s) 690, 814
BseMII CTCAG 3 cut(s) 528, 754, 917
BseNI ACTGG 1 cut(s) 591
BseRI GAGGAG 2 cut(s) 92, 1302
BseXI GCAGC 4 cut(s) 252, 403, 736, 1341
BseYI CCCAGC 2 cut(s) 319, 735
Bsh1236I CGCG 2 cut(s) 425, 1161
BshFI GGCC 5 cut(s) 413, 494, 542, 632, 734
BshNI GGYRCC 1 cut(s) 586
BshVI ATCGAT 1 cut(s) 1029
BsiHKAI GWGCWC 1 cut(s) 598
BsiSI CCGG 1 cut(s) 495
BslFI GGGAC 3 cut(s) 137, 260, 485
BslI CCNNNNNNNGG 5 cut(s) 148, 284, 1040, 1286, 1340
BsmAI GTCTC 2 cut(s) 253, 1253
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 3 cut(s) 137, 260, 485
BsmI GAATGC 1 cut(s) 832
BsnI GGCC 5 cut(s) 413, 494, 542, 632, 734
Bsp119I TTCGAA 2 cut(s) 486, 715
Bsp1286I GDGCHC 1 cut(s) 598
Bsp143I GATC 5 cut(s) 372, 528, 906, 1030, 1330
Bsp1720I GCTNAGC 1 cut(s) 740
BspACI CCGC 5 cut(s) 414, 425, 554, 617, 1159
BspANI GGCC 5 cut(s) 413, 494, 542, 632, 734
BspCNI CTCAG 3 cut(s) 529, 753, 916
BspDI ATCGAT 1 cut(s) 1029
BspFNI CGCG 2 cut(s) 425, 1161
BspLI GGNNCC 4 cut(s) 153, 493, 588, 1279
BspMAI CTGCAG 2 cut(s) 242, 603
BspPI GGATC 4 cut(s) 380, 536, 1025, 1325
BspT104I TTCGAA 2 cut(s) 486, 715
BspT107I GGYRCC 1 cut(s) 586
BsrDI GCAATG 2 cut(s) 690, 814
BsrI ACTGG 1 cut(s) 591
BssECI CCNNGG 4 cut(s) 226, 368, 495, 543
BssMI GATC 5 cut(s) 372, 528, 906, 1030, 1330
BssNI GRCGYC 1 cut(s) 381
Bst2UI CCWGG 2 cut(s) 227, 1111
Bst4CI ACNGT 4 cut(s) 562, 583, 1095, 1264
BstACI GRCGYC 1 cut(s) 381
BstAPI GCANNNNNTGC 1 cut(s) 809
BstBI TTCGAA 2 cut(s) 486, 715
BstC8I GCNNGC 4 cut(s) 233, 396, 805, 846
BstDEI CTNAG 3 cut(s) 537, 740, 903
BstF5I GGATG 6 cut(s) 47, 168, 182, 219, 520, 553
BstFNI CGCG 2 cut(s) 425, 1161
BstHHI GCGC 1 cut(s) 1163
BstKTI GATC 5 cut(s) 375, 531, 909, 1033, 1333
BstMAI GTCTC 2 cut(s) 253, 1253
BstMBI GATC 5 cut(s) 372, 528, 906, 1030, 1330
BstMWI GCNNNNNNNGC 5 cut(s) 237, 422, 758, 809, 940
BstNI CCWGG 2 cut(s) 227, 1111
BstSCI CCNGG 3 cut(s) 225, 494, 1109
BstSFI CTRYAG 3 cut(s) 238, 599, 1164
BstUI CGCG 2 cut(s) 425, 1161
BstV1I GCAGC 4 cut(s) 252, 403, 736, 1341
BstXI CCANNNNNNTGG 1 cut(s) 226
Bsu15I ATCGAT 1 cut(s) 1029
BsuI GTATCC 1 cut(s) 550
BsuRI GGCC 5 cut(s) 413, 494, 542, 632, 734
BsuTUI ATCGAT 1 cut(s) 1029
BtgZI GCGATG 1 cut(s) 27
BtsCI GGATG 6 cut(s) 47, 168, 182, 219, 520, 553
BtsI GCAGTG 1 cut(s) 531
BtsIMutI CAGTG 3 cut(s) 531, 598, 852
Cac8I GCNNGC 4 cut(s) 233, 396, 805, 846
CfoI GCGC 1 cut(s) 1163
Cfr13I GGNCC 7 cut(s) 151, 361, 492, 733, 775, 953, 1277
ClaI ATCGAT 1 cut(s) 1029
CseI GACGC 1 cut(s) 370
CsiI ACCWGGT 1 cut(s) 1109
Csp6I GTAC 1 cut(s) 587
CviAII CATG 3 cut(s) 446, 675, 1220
CviQI GTAC 1 cut(s) 587
DdeI CTNAG 3 cut(s) 537, 740, 903
DpnI GATC 5 cut(s) 374, 530, 908, 1032, 1332
DpnII GATC 5 cut(s) 372, 528, 906, 1030, 1330
DraI TTTAAA 2 cut(s) 1155, 1198
EaeI YGGCCR 1 cut(s) 630
Eco147I AGGCCT 1 cut(s) 542
Eco32I GATATC 1 cut(s) 606
Eco47I GGWCC 5 cut(s) 151, 361, 775, 953, 1277
Eco57I CTGAAG 1 cut(s) 1304
EcoO109I RGGNCCY 2 cut(s) 151, 775
EcoRI GAATTC 1 cut(s) 1210
EcoRII CCWGG 2 cut(s) 225, 1109
EcoRV GATATC 1 cut(s) 606
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 3 cut(s) 449, 678, 1223
FaqI GGGAC 3 cut(s) 137, 260, 485
FatI CATG 3 cut(s) 445, 674, 1219
FblI GTMKAC 1 cut(s) 255
Fnu4HI GCNGC 7 cut(s) 241, 392, 414, 426, 618, 750, 1355
FokI GGATG 6 cut(s) 34, 155, 169, 206, 527, 560
Fsp4HI GCNGC 7 cut(s) 241, 392, 414, 426, 618, 750, 1355
FspBI CTAG 4 cut(s) 162, 831, 1365, 1382
GlaI GCGC 1 cut(s) 1162
GluI GCNGC 7 cut(s) 241, 392, 414, 426, 618, 750, 1355
GsaI CCCAGC 2 cut(s) 323, 739
GsuI CTGGAG 3 cut(s) 485, 1275, 1305
HaeIII GGCC 5 cut(s) 413, 494, 542, 632, 734
HapII CCGG 1 cut(s) 495
HgaI GACGC 1 cut(s) 370
HhaI GCGC 1 cut(s) 1163
Hin1I GRCGYC 1 cut(s) 381
Hin1II CATG 3 cut(s) 449, 678, 1223
Hin6I GCGC 1 cut(s) 1161
HinP1I GCGC 1 cut(s) 1161
HindIII AAGCTT 1 cut(s) 842
HinfI GANTC 4 cut(s) 158, 670, 1135, 1237
HpaII CCGG 1 cut(s) 495
HphI GGTGA 5 cut(s) 679, 716, 1088, 1186, 1355
Hpy166II GTNNAC 2 cut(s) 256, 1079
Hpy188I TCNGA 7 cut(s) 208, 287, 308, 547, 768, 906, 1227
Hpy188III TCNNGA 4 cut(s) 162, 464, 1139, 1284
Hpy8I GTNNAC 2 cut(s) 256, 1079
Hpy99I CGWCG 2 cut(s) 36, 380
HpyAV CCTTC 5 cut(s) 128, 205, 451, 482, 883
HpyCH4III ACNGT 4 cut(s) 562, 583, 1095, 1264
HpyCH4IV ACGT 1 cut(s) 326
HpyCH4V TGCA 6 cut(s) 240, 331, 601, 785, 812, 1243
HpyF10VI GCNNNNNNNGC 5 cut(s) 237, 422, 758, 809, 940
HpyF3I CTNAG 3 cut(s) 537, 740, 903
HpySE526I ACGT 1 cut(s) 326
Hsp92I GRCGYC 1 cut(s) 381
Hsp92II CATG 3 cut(s) 449, 678, 1223
HspAI GCGC 1 cut(s) 1161
KpnI GGTACC 1 cut(s) 590
Kzo9I GATC 5 cut(s) 372, 528, 906, 1030, 1330
Lsp1109I GCAGC 4 cut(s) 252, 403, 736, 1341
LweI GCATC 1 cut(s) 1132
MabI ACCWGGT 1 cut(s) 1109
MaeI CTAG 4 cut(s) 162, 831, 1365, 1382
MaeII ACGT 1 cut(s) 326
MaeIII GTNAC 1 cut(s) 1006
MalI GATC 5 cut(s) 374, 530, 908, 1032, 1332
MboI GATC 5 cut(s) 372, 528, 906, 1030, 1330
MboII GAAGA 3 cut(s) 634, 892, 1310
MhlI GDGCHC 1 cut(s) 598
MlsI TGGCCA 1 cut(s) 632
MluCI AATT 6 cut(s) 106, 270, 786, 1035, 1178, 1210
MluNI TGGCCA 1 cut(s) 632
MmeI TCCRAC 2 cut(s) 1027, 1255
Mox20I TGGCCA 1 cut(s) 632
MscI TGGCCA 1 cut(s) 632
MseI TTAA 5 cut(s) 66, 837, 1154, 1197, 1248
Msp20I TGGCCA 1 cut(s) 632
MspA1I CMGCKG 1 cut(s) 662
MspI CCGG 1 cut(s) 495
MspR9I CCNGG 3 cut(s) 227, 496, 1111
Mva1269I GAATGC 1 cut(s) 832
MvaI CCWGG 2 cut(s) 227, 1111
MvnI CGCG 2 cut(s) 425, 1161
MwoI GCNNNNNNNGC 5 cut(s) 237, 422, 758, 809, 940
NciI CCSGG 1 cut(s) 496
NdeII GATC 5 cut(s) 372, 528, 906, 1030, 1330
NlaIII CATG 3 cut(s) 449, 678, 1223
NlaIV GGNNCC 4 cut(s) 153, 493, 588, 1279
NmeAIII GCCGAG 1 cut(s) 393
NspV TTCGAA 2 cut(s) 486, 715
PceI AGGCCT 1 cut(s) 542
PctI GAATGC 1 cut(s) 832
PfeI GAWTC 4 cut(s) 158, 670, 1135, 1237
PkrI GCNGC 7 cut(s) 242, 393, 415, 427, 619, 751, 1356
PpuMI RGGWCCY 2 cut(s) 151, 775
PsiI TTATAA 1 cut(s) 1307
Psp5II RGGWCCY 2 cut(s) 151, 775
Psp6I CCWGG 2 cut(s) 225, 1109
PspFI CCCAGC 2 cut(s) 319, 735
PspGI CCWGG 2 cut(s) 225, 1109
PspN4I GGNNCC 4 cut(s) 153, 493, 588, 1279
PspPI GGNCC 7 cut(s) 151, 361, 492, 733, 775, 953, 1277
PspPPI RGGWCCY 2 cut(s) 151, 775
PstI CTGCAG 2 cut(s) 242, 603
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 1 cut(s) 588
RsaNI GTAC 1 cut(s) 587
SaqAI TTAA 5 cut(s) 66, 837, 1154, 1197, 1248
SatI GCNGC 7 cut(s) 241, 392, 414, 426, 618, 750, 1355
Sau3AI GATC 5 cut(s) 372, 528, 906, 1030, 1330
Sau96I GGNCC 7 cut(s) 151, 361, 492, 733, 775, 953, 1277
ScrFI CCNGG 3 cut(s) 227, 496, 1111
SduI GDGCHC 1 cut(s) 598
SexAI ACCWGGT 1 cut(s) 1109
SfaNI GCATC 1 cut(s) 1132
SfcI CTRYAG 3 cut(s) 238, 599, 1164
SfuI TTCGAA 2 cut(s) 486, 715
SinI GGWCC 5 cut(s) 151, 361, 775, 953, 1277
SmiI ATTTAAAT 1 cut(s) 1198
Sse9I AATT 6 cut(s) 106, 270, 786, 1035, 1178, 1210
SseBI AGGCCT 1 cut(s) 542
SsiI CCGC 5 cut(s) 414, 425, 554, 617, 1159
SspMI CTAG 4 cut(s) 162, 831, 1365, 1382
StuI AGGCCT 1 cut(s) 542
StyD4I CCNGG 3 cut(s) 225, 494, 1109
SwaI ATTTAAAT 1 cut(s) 1198
TaaI ACNGT 4 cut(s) 562, 583, 1095, 1264
TaiI ACGT 1 cut(s) 329
TaqI TCGA 3 cut(s) 486, 715, 1029
TasI AATT 6 cut(s) 106, 270, 786, 1035, 1178, 1210
TauI GCSGC 3 cut(s) 416, 428, 620
TfiI GAWTC 4 cut(s) 158, 670, 1135, 1237
Tru1I TTAA 5 cut(s) 66, 837, 1154, 1197, 1248
Tru9I TTAA 5 cut(s) 66, 837, 1154, 1197, 1248
TscAI CASTG 3 cut(s) 538, 598, 859
TseI GCWGC 4 cut(s) 240, 391, 749, 1354
TspDTI ATGAA 4 cut(s) 187, 434, 902, 990
TspGWI ACGGA 3 cut(s) 20, 241, 598
TspRI CASTG 3 cut(s) 538, 598, 859
VpaK11BI GGWCC 5 cut(s) 151, 361, 775, 953, 1277
XapI RAATTY 2 cut(s) 1178, 1210
XbaI TCTAGA 1 cut(s) 161
XmiI GTMKAC 1 cut(s) 255
XspI CTAG 4 cut(s) 162, 831, 1365, 1382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.