Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0016882

Physical Location & Seq

Genomic Coordinates Forward (+)

32775776 .. 32777903

Gene Structure 2128 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024176

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGTTAACCAAGGGAAACACAATACCAAGCTTACTGTGCAGCTGTCTCTTCATCCTTACTTGCCTAGATCATCTCTGCACTTCCCAAAAGCCATGCCCGGACTGTGGCTCCCTTAAAGTCCCATATCCGCTAAGCACAAACCCCGGTTGTGGTGATCCGGACTACTCTCTCAAATGTGACCCCTTCTCTAAGAAACTCTATGTCCCCGCCCTTAATGGAAGTTACTATCTTGTGCTTCAAATTATGGCCTCGCACCAGCGTATGGTGGTACAACCATCCCCATGGCTGCCAGGAAATGAGTGTGTTACTCGAGACATGGTGGTGAGTGAAGGCCTCTGGTTAAACCAGTCACTTCCTTTCAACATCACTTCATCAAACACCATCTTTCTCTTCAACTGCTCTCCGCGGCTCTTGGTTTCTCCTCTGAATTGCACTCCCTCTAGTCTTTGTCACCGCTACTTGGAAAGCTCGGGGCATGTTGACACACAACGAGCACTCAAGTGTGAGAGCACCCTCAACCTTTGCTGCACATTTGTTGCTGGTGGAACACCTTCAGCATACAAGATTCGGCTTCACAGTTCAGGTTGCAAAGCCTTTAGAAGCGTTCTTCATTTGGACGTAAACAAGCCTGTTGATCAATGGCAAGATGGATTGGAAGTTCAATGGGCTCCTCCACTTGAACCGGTTTGTAGTGCACAGCCTGATTGTTCTAGCACTTCTAAATGTTCACTTACTGCCACAAATGGCCGCTCTCGCTGCTTCTGCAACAAGGGCTACTACTGGGATCAAGTTCTGACAACTTGTGTGAAGAACAAGAGAAACACCAAAGCTAGCCTGAGTTTAAAGGTCTCAGTTGGGGTAATCTCCTTTTTCGTTCTAGCTGTGGTTATATCCATAATTACAGTAAAACGGGCCTGCAGATTGTCTGAGCAGGAAAAGCTTATAAAAACGAGAGAAGACATGTTGAAGAGCAATGATAAGAAATCAGCTAGAATGTTTCACTTGAAAGAAGTTAAGAAAGCCACTAATGGATTCTCTAAAGACCGAATTTTAGGGAGTGGTGGTTTTGGAGAAGTGTACAAAGGCGAGCTTGAAGATGGGACTATAGTGGCTGTGAAGTCTGCTAAAGTGGGAAACATAAAGAGCACAGAACAAGTATTAAATGAAGTTGGGATTCTATCCCAAGTCAATCACAAGAACCTGGTCAGACTCTTGGGTTACTGCATGGAAGCCGAACAGCCACTGATGCTCTATGAGTACATTTCAAATGGGACACTTAGTGAGCATTTACATGGTAAGTTTTCCACGTTTCTTGAATGGAAAACGAGGCTGAGAATTGCTTTACAAACTGCGGAAGCATTGGGATACTTACATTCTGCTGCTCACACTCCCATCTACCATAGAGATGTCAAGTCAACCAATATATTACTCGATGATGAATTCAATGCAAAAGTATCAGATTTCGGGCTCTCCAGGTTGGCTCTTCCTGGGTTGAGTCATGTCTCAACTTGTGCTCAGGGTACATTGGGGTACTTAGACCCTGAGTATTACAAAAACTACCAATTGACTGATAAAAGTGATGTTTATAGTTATGGGGTTGTGATGCTTGAGCTTTTGACATCACAGAAAGCCATTGATTTCTCGCGTGGCGAAGATGATGTGAATCTAGTCATTTATGTGAGCGTAAGAGCCAGCAATGGTGCGATTATGGAAGTTGTGGATCAGCGGCTGCTTAGAGATAAAGAGCCTCCAGGGAATGTTGTGGGAAGTGTAAAGGCTTTCTTAGATCTTGCTCTTGCTTGTCTGAGGGAAAAGAAGGGAGATAGACCAACCATGAAGGATGTTGTTCAAGAACTCCAGTGCATAATCCAAAATTCAGATCCAGAAGTGCTTCATAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

634

Amino Acids

70.14

Weight (kDa)

8.33

Isoelectric Point (pI)

33.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	32 - 90	1.7e-07	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	346 - 617	6.5e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	348 - 619	1.5e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016882)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g17330
malus_domestica	MD12G1102000.v1.1 MD14G1096100.v1.1
prunus_persica	Prupe.7G122200_v2.0.a1
pyrus_communis	pycom14g09410
rosa_chinensis	RchiOBHm_Chr3g0471461
rosa_laevigata	RLG00000024176
rosa_multiflora	Rmu_sc0006582.1_g000008
rosa_roxburghii	Rroxscaffold_6G00409930
rosa_rugosa	Rorug03G0117900
rosa_samantha	Rh3AG167800 Rh3BG193300 Rh3DG182200
rosa_wichuraiana	Rw3G015810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	944
AccB7I	CCANNNNNTGG	1 cut(s)	262
AccBSI	CCGCTC	1 cut(s)	750
AccII	CGCG	2 cut(s)	406, 1645
AccIII	TCCGGA	1 cut(s)	157
AciI	CCGC	8 cut(s)	128, 207, 404, 406, 454, 748, 1352, 1726
AclWI	GGATC	4 cut(s)	149, 792, 1728, 1874
AcoI	YGGCCR	1 cut(s)	745
AcsI	RAATTY	3 cut(s)	1047, 1439, 1873
AcuI	CTGAAG	1 cut(s)	537
AdeI	CACNNNGTG	1 cut(s)	1280
AfaI	GTAC	5 cut(s)	270, 1079, 1259, 1522, 1532
AfiI	CCNNNNNNNGG	4 cut(s)	104, 149, 262, 460
AflIII	ACRYGT	1 cut(s)	960
AgeI	ACCGGT	1 cut(s)	682
AjnI	CCWGG	5 cut(s)	289, 1200, 1472, 1486, 1750
AleI	CACNNNNGTG	1 cut(s)	499
AloI	GAACNNNNNNTCC	2 cut(s)	642, 674
AluBI	AGCT	9 cut(s)	30, 42, 468, 830, 881, 940, 989, 1090, 1612
AluI	AGCT	9 cut(s)	30, 42, 468, 830, 881, 940, 989, 1090, 1612
Alw21I	GWGCWC	5 cut(s)	496, 512, 697, 1148, 1516
Alw26I	GTCTC	4 cut(s)	50, 306, 853, 1507
Alw44I	GTGCAC	1 cut(s)	693
AlwI	GGATC	4 cut(s)	149, 792, 1728, 1874
AlwNI	CAGNNNCTG	2 cut(s)	1243, 1729
Ama87I	CYCGRG	2 cut(s)	309, 469
Aor13HI	TCCGGA	1 cut(s)	157
AoxI	GGCC	4 cut(s)	246, 331, 745, 912
ApaLI	GTGCAC	1 cut(s)	693
ApeKI	GCWGC	6 cut(s)	39, 286, 525, 756, 1379, 1729
ApoI	RAATTY	3 cut(s)	1047, 1439, 1873
AsiGI	ACCGGT	1 cut(s)	682
Asp700I	GAANNNNTTC	2 cut(s)	550, 1890
AspS9I	GGNCC	1 cut(s)	912
AsuC2I	CCSGG	2 cut(s)	98, 144
AsuHPI	GGTGA	3 cut(s)	164, 334, 443
AsuNHI	GCTAGC	1 cut(s)	830
AvaI	CYCGRG	2 cut(s)	309, 469
BaeGI	GKGCMC	1 cut(s)	697
BanII	GRGCYC	2 cut(s)	670, 1470
BbsI	GAAGAC	1 cut(s)	963
Bbv12I	GWGCWC	5 cut(s)	496, 512, 697, 1148, 1516
BbvI	GCAGC	6 cut(s)	51, 273, 512, 743, 1366, 1716
BccI	CCATC	5 cut(s)	283, 389, 641, 1091, 1400
BciT130I	CCWGG	5 cut(s)	291, 1202, 1474, 1488, 1752
BciVI	GTATCC	1 cut(s)	1358
BclI	TGATCA	1 cut(s)	634
BcnI	CCSGG	2 cut(s)	98, 144
BcoDI	GTCTC	4 cut(s)	50, 306, 853, 1507
BfaI	CTAG	7 cut(s)	65, 441, 711, 831, 878, 990, 1667
BfmI	CTRYAG	2 cut(s)	916, 1104
BfuI	GTATCC	1 cut(s)	1358
BglII	AGATCT	1 cut(s)	1786
BisI	GCNGC	9 cut(s)	40, 287, 407, 526, 748, 757, 1380, 1727, 1730
BlpI	GCTNAGC	1 cut(s)	131
BlsI	GCNGC	9 cut(s)	41, 288, 408, 527, 749, 758, 1381, 1728, 1731
Bme1390I	CCNGG	7 cut(s)	98, 144, 291, 1202, 1474, 1488, 1752
BmeT110I	CYCGRG	2 cut(s)	309, 469
BmgT120I	GGNCC	1 cut(s)	912
BmiI	GGNNCC	2 cut(s)	109, 669
BmrFI	CCNGG	7 cut(s)	98, 144, 291, 1202, 1474, 1488, 1752
BmrI	ACTGGG	1 cut(s)	790
BmsI	GCATC	2 cut(s)	1236, 1593
BmtI	GCTAGC	1 cut(s)	834
BmuI	ACTGGG	1 cut(s)	790
BpiI	GAAGAC	1 cut(s)	963
BpmI	CTGGAG	3 cut(s)	1456, 1734, 1841
Bpu10I	CCTNAGC	1 cut(s)	1515
Bpu1102I	GCTNAGC	1 cut(s)	131
BpuEI	CTTGAG	2 cut(s)	482, 1628
BpuMI	CCSGG	2 cut(s)	98, 144
BsaBI	GATNNNNATC	1 cut(s)	1662
BsaI	GGTCTC	1 cut(s)	853
BsaJI	CCNNGG	6 cut(s)	9, 142, 281, 404, 1487, 1751
BsaWI	WCCGGW	2 cut(s)	157, 682
BsaXI	ACNNNNNCTCC	4 cut(s)	92, 122, 1048, 1078
Bsc4I	CCNNNNNNNGG	4 cut(s)	104, 149, 262, 460
Bse118I	RCCGGY	1 cut(s)	682
Bse1I	ACTGG	3 cut(s)	346, 785, 1858
Bse3DI	GCAATG	2 cut(s)	979, 1702
Bse8I	GATNNNNATC	1 cut(s)	1662
BseAI	TCCGGA	1 cut(s)	157
BseBI	CCWGG	5 cut(s)	291, 1202, 1474, 1488, 1752
BseDI	CCNNGG	6 cut(s)	9, 142, 281, 404, 1487, 1751
BseGI	GGATG	3 cut(s)	51, 275, 1846
BseJI	GATNNNNATC	1 cut(s)	1662
BseLI	CCNNNNNNNGG	4 cut(s)	104, 149, 262, 460
BseMI	GCAATG	2 cut(s)	979, 1702
BseMII	CTCAG	7 cut(s)	827, 864, 918, 1322, 1529, 1533, 1796
BseNI	ACTGG	3 cut(s)	346, 785, 1858
BseRI	GAGGAG	2 cut(s)	411, 660
BseSI	GKGCMC	1 cut(s)	697
BseXI	GCAGC	6 cut(s)	51, 273, 512, 743, 1366, 1716
BsgI	GTGCAG	3 cut(s)	58, 61, 511
Bsh1236I	CGCG	2 cut(s)	406, 1645
BshFI	GGCC	4 cut(s)	248, 333, 747, 914
BshTI	ACCGGT	1 cut(s)	682
BsiHKAI	GWGCWC	5 cut(s)	496, 512, 697, 1148, 1516
BsiHKCI	CYCGRG	2 cut(s)	309, 469
BsiSI	CCGG	4 cut(s)	98, 144, 158, 683
BslFI	GGGAC	4 cut(s)	104, 188, 1114, 1285
BslI	CCNNNNNNNGG	4 cut(s)	104, 149, 262, 460
BsmAI	GTCTC	4 cut(s)	50, 306, 853, 1507
BsmFI	GGGAC	4 cut(s)	104, 188, 1114, 1285
BsnI	GGCC	4 cut(s)	248, 333, 747, 914
Bso31I	GGTCTC	1 cut(s)	853
BsoBI	CYCGRG	2 cut(s)	309, 469
Bsp1286I	GDGCHC	7 cut(s)	496, 512, 670, 697, 1148, 1470, 1516
Bsp13I	TCCGGA	1 cut(s)	157
Bsp1407I	TGTACA	1 cut(s)	1077
Bsp143I	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
Bsp1720I	GCTNAGC	1 cut(s)	131
Bsp19I	CCATGG	1 cut(s)	281
BspACI	CCGC	8 cut(s)	128, 207, 404, 406, 454, 748, 1352, 1726
BspANI	GGCC	4 cut(s)	248, 333, 747, 914
BspCNI	CTCAG	7 cut(s)	828, 863, 919, 1323, 1528, 1534, 1797
BspEI	TCCGGA	1 cut(s)	157
BspFNI	CGCG	2 cut(s)	406, 1645
BspLI	GGNNCC	2 cut(s)	109, 669
BspMAI	CTGCAG	1 cut(s)	920
BspOI	GCTAGC	1 cut(s)	834
BspPI	GGATC	4 cut(s)	149, 792, 1728, 1874
BspQI	GCTCTTC	2 cut(s)	962, 1488
BspTNI	GGTCTC	1 cut(s)	853
BsrBI	CCGCTC	1 cut(s)	750
BsrDI	GCAATG	2 cut(s)	979, 1702
BsrFI	RCCGGY	1 cut(s)	682
BsrGI	TGTACA	1 cut(s)	1077
BsrI	ACTGG	3 cut(s)	346, 785, 1858
BssAI	RCCGGY	1 cut(s)	682
BssECI	CCNNGG	6 cut(s)	9, 142, 281, 404, 1487, 1751
BssMI	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
BssT1I	CCWWGG	2 cut(s)	9, 281
Bst2UI	CCWGG	5 cut(s)	291, 1202, 1474, 1488, 1752
Bst4CI	ACNGT	4 cut(s)	36, 104, 578, 904
Bst6I	CTCTTC	4 cut(s)	53, 395, 962, 1488
BstAUI	TGTACA	1 cut(s)	1077
BstC8I	GCNNGC	4 cut(s)	832, 916, 1088, 1693
BstDSI	CCRYGG	2 cut(s)	281, 404
BstF5I	GGATG	3 cut(s)	51, 275, 1846
BstFNI	CGCG	2 cut(s)	406, 1645
BstKTI	GATC	7 cut(s)	70, 157, 637, 787, 1723, 1789, 1882
BstMAI	GTCTC	4 cut(s)	50, 306, 853, 1507
BstMBI	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 753, 756, 762, 771, 937, 1246
BstNI	CCWGG	5 cut(s)	291, 1202, 1474, 1488, 1752
BstNSI	RCATGY	2 cut(s)	479, 964
BstSCI	CCNGG	7 cut(s)	96, 142, 289, 1200, 1472, 1486, 1750
BstSFI	CTRYAG	2 cut(s)	916, 1104
BstSLI	GKGCMC	1 cut(s)	697
BstUI	CGCG	2 cut(s)	406, 1645
BstV1I	GCAGC	6 cut(s)	51, 273, 512, 743, 1366, 1716
BstV2I	GAAGAC	1 cut(s)	963
BstX2I	RGATCY	2 cut(s)	1786, 1879
BstXI	CCANNNNNNTGG	1 cut(s)	282
BstYI	RGATCY	2 cut(s)	1786, 1879
BsuI	GTATCC	1 cut(s)	1358
BsuRI	GGCC	4 cut(s)	248, 333, 747, 914
BtgI	CCRYGG	2 cut(s)	281, 404
BtsCI	GGATG	3 cut(s)	51, 275, 1846
BtsIMutI	CAGTG	2 cut(s)	1241, 1865
Cac8I	GCNNGC	4 cut(s)	832, 916, 1088, 1693
CaiI	CAGNNNCTG	2 cut(s)	1243, 1729
Cfr10I	RCCGGY	1 cut(s)	682
Cfr13I	GGNCC	1 cut(s)	912
Cfr42I	CCGCGG	1 cut(s)	407
CsiI	ACCWGGT	1 cut(s)	1200
Csp6I	GTAC	5 cut(s)	269, 1078, 1258, 1521, 1531
CspAI	ACCGGT	1 cut(s)	682
CspCI	CAANNNNNGTGG	2 cut(s)	1294, 1329
CviAII	CATG	9 cut(s)	93, 282, 316, 476, 961, 1225, 1292, 1499, 1834
CviQI	GTAC	5 cut(s)	269, 1078, 1258, 1521, 1531
DpnI	GATC	7 cut(s)	69, 156, 636, 786, 1722, 1788, 1881
DpnII	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
DraI	TTTAAA	1 cut(s)	843
DraIII	CACNNNGTG	1 cut(s)	1280
EaeI	YGGCCR	1 cut(s)	745
Eam1104I	CTCTTC	4 cut(s)	53, 395, 962, 1488
EarI	CTCTTC	4 cut(s)	53, 395, 962, 1488
Eco130I	CCWWGG	2 cut(s)	9, 281
Eco147I	AGGCCT	1 cut(s)	333
Eco24I	GRGCYC	2 cut(s)	670, 1470
Eco31I	GGTCTC	1 cut(s)	853
Eco57I	CTGAAG	1 cut(s)	537
Eco88I	CYCGRG	2 cut(s)	309, 469
EcoRI	GAATTC	1 cut(s)	1439
EcoRII	CCWGG	5 cut(s)	289, 1200, 1472, 1486, 1750
EcoT14I	CCWWGG	2 cut(s)	9, 281
EcoT38I	GRGCYC	2 cut(s)	670, 1470
ErhI	CCWWGG	2 cut(s)	9, 281
FaeI	CATG	9 cut(s)	96, 285, 319, 479, 964, 1228, 1295, 1502, 1837
FalI	AAGNNNNNCTT	4 cut(s)	1074, 1106, 1766, 1798
FaqI	GGGAC	4 cut(s)	104, 188, 1114, 1285
FatI	CATG	9 cut(s)	92, 281, 315, 475, 960, 1224, 1291, 1498, 1833
FauI	CCCGC	1 cut(s)	214
FbaI	TGATCA	1 cut(s)	634
Fnu4HI	GCNGC	9 cut(s)	40, 287, 407, 526, 748, 757, 1380, 1727, 1730
FokI	GGATG	3 cut(s)	38, 262, 1853
FriOI	GRGCYC	2 cut(s)	670, 1470
Fsp4HI	GCNGC	9 cut(s)	40, 287, 407, 526, 748, 757, 1380, 1727, 1730
FspBI	CTAG	7 cut(s)	65, 441, 711, 831, 878, 990, 1667
GluI	GCNGC	9 cut(s)	40, 287, 407, 526, 748, 757, 1380, 1727, 1730
GsuI	CTGGAG	3 cut(s)	1456, 1734, 1841
HaeIII	GGCC	4 cut(s)	248, 333, 747, 914
HapII	CCGG	4 cut(s)	98, 144, 158, 683
Hin1II	CATG	9 cut(s)	96, 285, 319, 479, 964, 1228, 1295, 1502, 1837
HincII	GTYRAC	3 cut(s)	6, 481, 1416
HindII	GTYRAC	3 cut(s)	6, 481, 1416
HindIII	AAGCTT	2 cut(s)	28, 938
HinfI	GANTC	6 cut(s)	565, 1032, 1174, 1209, 1495, 1663
HpaI	GTTAAC	1 cut(s)	6
HpaII	CCGG	4 cut(s)	98, 144, 158, 683
HphI	GGTGA	3 cut(s)	164, 334, 443
Hpy166II	GTNNAC	7 cut(s)	6, 481, 622, 695, 728, 1078, 1416
Hpy188I	TCNGA	7 cut(s)	426, 795, 928, 1208, 1459, 1806, 1879
Hpy188III	TCNNGA	5 cut(s)	158, 311, 1313, 1850, 1883
Hpy8I	GTNNAC	7 cut(s)	6, 481, 622, 695, 728, 1078, 1416
HpyAV	CCTTC	5 cut(s)	193, 323, 561, 1810, 1831
HpyCH4III	ACNGT	4 cut(s)	36, 104, 578, 904
HpyCH4IV	ACGT	2 cut(s)	618, 1307
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 753, 756, 762, 771, 937, 1246
HpySE526I	ACGT	2 cut(s)	618, 1307
Hsp92II	CATG	9 cut(s)	96, 285, 319, 479, 964, 1228, 1295, 1502, 1837
Kpn2I	TCCGGA	1 cut(s)	157
Ksp22I	TGATCA	1 cut(s)	634
KspAI	GTTAAC	1 cut(s)	6
KspI	CCGCGG	1 cut(s)	407
Kzo9I	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
LguI	GCTCTTC	2 cut(s)	962, 1488
LmnI	GCTCC	2 cut(s)	113, 673
Lsp1109I	GCAGC	6 cut(s)	51, 273, 512, 743, 1366, 1716
LweI	GCATC	2 cut(s)	1236, 1593
MabI	ACCWGGT	1 cut(s)	1200
MaeI	CTAG	7 cut(s)	65, 441, 711, 831, 878, 990, 1667
MaeII	ACGT	2 cut(s)	618, 1307
MaeIII	GTNAC	6 cut(s)	176, 221, 304, 348, 449, 1217
MalI	GATC	7 cut(s)	69, 156, 636, 786, 1722, 1788, 1881
MbiI	CCGCTC	1 cut(s)	750
MboI	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
MboII	GAAGA	9 cut(s)	40, 382, 599, 820, 968, 979, 1106, 1475, 1664
MfeI	CAATTG	1 cut(s)	1562
MflI	RGATCY	2 cut(s)	1786, 1879
MhlI	GDGCHC	7 cut(s)	496, 512, 670, 697, 1148, 1470, 1516
MluCI	AATT	9 cut(s)	240, 427, 897, 1047, 1335, 1439, 1562, 1873, 1897
MlyI	GAGTC	2 cut(s)	1203, 1504
MnlI	CCTC	9 cut(s)	259, 344, 432, 448, 524, 681, 1320, 1758, 1800
MroI	TCCGGA	1 cut(s)	157
MroXI	GAANNNNTTC	2 cut(s)	550, 1890
MseI	TTAA	8 cut(s)	5, 114, 213, 341, 842, 1014, 1160, 1900
MslI	CAYNNNNRTG	6 cut(s)	280, 320, 499, 1290, 1404, 1676
MspA1I	CMGCKG	3 cut(s)	42, 406, 1726
MspI	CCGG	4 cut(s)	98, 144, 158, 683
MspR9I	CCNGG	7 cut(s)	98, 144, 291, 1202, 1474, 1488, 1752
MunI	CAATTG	1 cut(s)	1562
MvaI	CCWGG	5 cut(s)	291, 1202, 1474, 1488, 1752
MvnI	CGCG	2 cut(s)	406, 1645
MwoI	GCNNNNNNNGC	7 cut(s)	36, 753, 756, 762, 771, 937, 1246
NciI	CCSGG	2 cut(s)	98, 144
NcoI	CCATGG	1 cut(s)	281
NdeII	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
NheI	GCTAGC	1 cut(s)	830
NlaIII	CATG	9 cut(s)	96, 285, 319, 479, 964, 1228, 1295, 1502, 1837
NlaIV	GGNNCC	2 cut(s)	109, 669
NmuCI	GTSAC	3 cut(s)	176, 348, 449
NspI	RCATGY	2 cut(s)	479, 964
OliI	CACNNNNGTG	1 cut(s)	499
PaeR7I	CTCGAG	1 cut(s)	309
PceI	AGGCCT	1 cut(s)	333
PciI	ACATGT	1 cut(s)	960
PciSI	GCTCTTC	2 cut(s)	962, 1488
PdmI	GAANNNNTTC	2 cut(s)	550, 1890
PfeI	GAWTC	4 cut(s)	565, 1032, 1174, 1663
PflMI	CCANNNNNTGG	1 cut(s)	262
PinAI	ACCGGT	1 cut(s)	682
PkrI	GCNGC	9 cut(s)	41, 288, 408, 527, 749, 758, 1381, 1728, 1731
PleI	GAGTC	2 cut(s)	1203, 1503
PpsI	GAGTC	2 cut(s)	1203, 1503
PscI	ACATGT	1 cut(s)	960
PsiI	TTATAA	1 cut(s)	944
Psp6I	CCWGG	5 cut(s)	289, 1200, 1472, 1486, 1750
PspGI	CCWGG	5 cut(s)	289, 1200, 1472, 1486, 1750
PspN4I	GGNNCC	2 cut(s)	109, 669
PspPI	GGNCC	1 cut(s)	912
PstI	CTGCAG	1 cut(s)	920
PstNI	CAGNNNCTG	2 cut(s)	1243, 1729
PsuI	RGATCY	2 cut(s)	1786, 1879
PvuII	CAGCTG	1 cut(s)	42
RsaI	GTAC	5 cut(s)	270, 1079, 1259, 1522, 1532
RsaNI	GTAC	5 cut(s)	269, 1078, 1258, 1521, 1531
RseI	CAYNNNNRTG	6 cut(s)	280, 320, 499, 1290, 1404, 1676
SacII	CCGCGG	1 cut(s)	407
SapI	GCTCTTC	2 cut(s)	962, 1488
SaqAI	TTAA	8 cut(s)	5, 114, 213, 341, 842, 1014, 1160, 1900
SatI	GCNGC	9 cut(s)	40, 287, 407, 526, 748, 757, 1380, 1727, 1730
Sau3AI	GATC	7 cut(s)	67, 154, 634, 784, 1720, 1786, 1879
Sau96I	GGNCC	1 cut(s)	912
SchI	GAGTC	2 cut(s)	1203, 1504
ScrFI	CCNGG	7 cut(s)	98, 144, 291, 1202, 1474, 1488, 1752
SduI	GDGCHC	7 cut(s)	496, 512, 670, 697, 1148, 1470, 1516
SexAI	ACCWGGT	1 cut(s)	1200
SfaNI	GCATC	2 cut(s)	1236, 1593
SfcI	CTRYAG	2 cut(s)	916, 1104
Sfr274I	CTCGAG	1 cut(s)	309
Sfr303I	CCGCGG	1 cut(s)	407
SgrBI	CCGCGG	1 cut(s)	407
SlaI	CTCGAG	1 cut(s)	309
SmiMI	CAYNNNNRTG	6 cut(s)	280, 320, 499, 1290, 1404, 1676
SmlI	CTYRAG	3 cut(s)	309, 497, 1607
SmoI	CTYRAG	3 cut(s)	309, 497, 1607
Sse9I	AATT	9 cut(s)	240, 427, 897, 1047, 1335, 1439, 1562, 1873, 1897
SseBI	AGGCCT	1 cut(s)	333
SsiI	CCGC	8 cut(s)	128, 207, 404, 406, 454, 748, 1352, 1726
SspMI	CTAG	7 cut(s)	65, 441, 711, 831, 878, 990, 1667
StuI	AGGCCT	1 cut(s)	333
StyD4I	CCNGG	7 cut(s)	96, 142, 289, 1200, 1472, 1486, 1750
StyI	CCWWGG	2 cut(s)	9, 281
TaaI	ACNGT	4 cut(s)	36, 104, 578, 904
TaiI	ACGT	2 cut(s)	621, 1310
TaqI	TCGA	2 cut(s)	310, 1431
TaqII	GACCGA	1 cut(s)	1059
TasI	AATT	9 cut(s)	240, 427, 897, 1047, 1335, 1439, 1562, 1873, 1897
TatI	WGTACW	2 cut(s)	1077, 1257
TauI	GCSGC	3 cut(s)	409, 750, 1729
TfiI	GAWTC	4 cut(s)	565, 1032, 1174, 1663
Tru1I	TTAA	8 cut(s)	5, 114, 213, 341, 842, 1014, 1160, 1900
Tru9I	TTAA	8 cut(s)	5, 114, 213, 341, 842, 1014, 1160, 1900
TscAI	CASTG	2 cut(s)	1248, 1865
TseFI	GTSAC	3 cut(s)	176, 348, 449
TseI	GCWGC	6 cut(s)	39, 286, 525, 756, 1379, 1729
Tsp45I	GTSAC	3 cut(s)	176, 348, 449
TspDTI	ATGAA	7 cut(s)	40, 360, 599, 1179, 1452, 1850, 1883
TspRI	CASTG	2 cut(s)	1248, 1865
Van91I	CCANNNNNTGG	1 cut(s)	262
VneI	GTGCAC	1 cut(s)	693
XapI	RAATTY	3 cut(s)	1047, 1439, 1873
XceI	RCATGY	2 cut(s)	479, 964
XhoI	CTCGAG	1 cut(s)	309
XmnI	GAANNNNTTC	2 cut(s)	550, 1890
XspI	CTAG	7 cut(s)	65, 441, 711, 831, 878, 990, 1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.