TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000029108 |
| rosa_multiflora | Rmu_sc0001400.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00312560 |
| rosa_wichuraiana | Rw1G014080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 383 |
| AccBSI | CCGCTC | 1 cut(s) | 493 |
| AciI | CCGC | 1 cut(s) | 493 |
| AcuI | CTGAAG | 2 cut(s) | 265, 280 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 407 |
| AgsI | TTSAA | 8 cut(s) | 118, 230, 275, 359, 393, 464, 533, 678 |
| AhlI | ACTAGT | 1 cut(s) | 100 |
| AjnI | CCWGG | 1 cut(s) | 484 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 586, 613, 618, 640, 645, 672 |
| AluBI | AGCT | 4 cut(s) | 66, 160, 182, 269 |
| AluI | AGCT | 4 cut(s) | 66, 160, 182, 269 |
| Alw26I | GTCTC | 1 cut(s) | 952 |
| AoxI | GGCC | 2 cut(s) | 13, 375 |
| ApeKI | GCWGC | 1 cut(s) | 668 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1000 |
| AspS9I | GGNCC | 1 cut(s) | 376 |
| AsuHPI | GGTGA | 5 cut(s) | 326, 465, 818, 891, 1026 |
| BauI | CACGAG | 1 cut(s) | 512 |
| BbsI | GAAGAC | 1 cut(s) | 1053 |
| BbvI | GCAGC | 1 cut(s) | 655 |
| BccI | CCATC | 2 cut(s) | 646, 797 |
| BciT130I | CCWGG | 1 cut(s) | 486 |
| BcoDI | GTCTC | 1 cut(s) | 952 |
| BcuI | ACTAGT | 1 cut(s) | 100 |
| BfaI | CTAG | 3 cut(s) | 53, 101, 1063 |
| BisI | GCNGC | 1 cut(s) | 669 |
| BlsI | GCNGC | 1 cut(s) | 670 |
| Bme1390I | CCNGG | 1 cut(s) | 486 |
| BmgT120I | GGNCC | 1 cut(s) | 376 |
| BmrFI | CCNGG | 1 cut(s) | 486 |
| BmsI | GCATC | 2 cut(s) | 414, 615 |
| BpiI | GAAGAC | 1 cut(s) | 1053 |
| BpmI | CTGGAG | 1 cut(s) | 507 |
| BpuEI | CTTGAG | 1 cut(s) | 88 |
| Bsa29I | ATCGAT | 1 cut(s) | 583 |
| BsaBI | GATNNNNATC | 2 cut(s) | 153, 740 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 407 |
| Bse1I | ACTGG | 3 cut(s) | 333, 614, 641 |
| Bse8I | GATNNNNATC | 2 cut(s) | 153, 740 |
| BseBI | CCWGG | 1 cut(s) | 486 |
| BseCI | ATCGAT | 1 cut(s) | 583 |
| BseGI | GGATG | 6 cut(s) | 13, 523, 627, 654, 832, 876 |
| BseJI | GATNNNNATC | 2 cut(s) | 153, 740 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 407 |
| BseMII | CTCAG | 1 cut(s) | 947 |
| BseNI | ACTGG | 3 cut(s) | 333, 614, 641 |
| BseXI | GCAGC | 1 cut(s) | 655 |
| BshFI | GGCC | 2 cut(s) | 15, 377 |
| BshVI | ATCGAT | 1 cut(s) | 583 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 407 |
| BsmAI | GTCTC | 1 cut(s) | 952 |
| BsmI | GAATGC | 2 cut(s) | 99, 343 |
| BsnI | GGCC | 2 cut(s) | 15, 377 |
| Bsp143I | GATC | 2 cut(s) | 580, 584 |
| BspACI | CCGC | 1 cut(s) | 493 |
| BspANI | GGCC | 2 cut(s) | 15, 377 |
| BspCNI | CTCAG | 1 cut(s) | 946 |
| BspDI | ATCGAT | 1 cut(s) | 583 |
| BspHI | TCATGA | 1 cut(s) | 771 |
| BsrBI | CCGCTC | 1 cut(s) | 493 |
| BsrI | ACTGG | 3 cut(s) | 333, 614, 641 |
| BssMI | GATC | 2 cut(s) | 580, 584 |
| BssSI | CACGAG | 1 cut(s) | 512 |
| Bst2BI | CACGAG | 1 cut(s) | 512 |
| Bst2UI | CCWGG | 1 cut(s) | 486 |
| Bst4CI | ACNGT | 2 cut(s) | 504, 863 |
| Bst6I | CTCTTC | 5 cut(s) | 102, 119, 284, 445, 839 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 338, 707 |
| BstC8I | GCNNGC | 1 cut(s) | 291 |
| BstDEI | CTNAG | 2 cut(s) | 136, 933 |
| BstF5I | GGATG | 6 cut(s) | 13, 523, 627, 654, 832, 876 |
| BstKTI | GATC | 2 cut(s) | 583, 587 |
| BstMAI | GTCTC | 1 cut(s) | 952 |
| BstMBI | GATC | 2 cut(s) | 580, 584 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 338, 374, 707 |
| BstNI | CCWGG | 1 cut(s) | 486 |
| BstNSI | RCATGY | 1 cut(s) | 293 |
| BstSCI | CCNGG | 1 cut(s) | 484 |
| BstV1I | GCAGC | 1 cut(s) | 655 |
| BstV2I | GAAGAC | 1 cut(s) | 1053 |
| Bsu15I | ATCGAT | 1 cut(s) | 583 |
| BsuRI | GGCC | 2 cut(s) | 15, 377 |
| BsuTUI | ATCGAT | 1 cut(s) | 583 |
| BtgZI | GCGATG | 1 cut(s) | 816 |
| BtsCI | GGATG | 6 cut(s) | 13, 523, 627, 654, 832, 876 |
| BtsI | GCAGTG | 1 cut(s) | 339 |
| BtsIMutI | CAGTG | 2 cut(s) | 339, 859 |
| Cac8I | GCNNGC | 1 cut(s) | 291 |
| CciI | TCATGA | 1 cut(s) | 771 |
| Cfr13I | GGNCC | 1 cut(s) | 376 |
| ClaI | ATCGAT | 1 cut(s) | 583 |
| CviAII | CATG | 3 cut(s) | 290, 428, 772 |
| CviJI | RGCY | 8 cut(s) | 15, 66, 160, 182, 269, 307, 377, 400 |
| CviKI_1 | RGCY | 8 cut(s) | 15, 66, 160, 182, 269, 307, 377, 400 |
| DdeI | CTNAG | 2 cut(s) | 136, 933 |
| DpnI | GATC | 2 cut(s) | 582, 586 |
| DpnII | GATC | 2 cut(s) | 580, 584 |
| Eam1104I | CTCTTC | 5 cut(s) | 102, 119, 284, 445, 839 |
| EarI | CTCTTC | 5 cut(s) | 102, 119, 284, 445, 839 |
| Eco147I | AGGCCT | 1 cut(s) | 15 |
| Eco32I | GATATC | 1 cut(s) | 742 |
| Eco57I | CTGAAG | 2 cut(s) | 265, 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 376 |
| EcoRII | CCWGG | 1 cut(s) | 484 |
| EcoRV | GATATC | 1 cut(s) | 742 |
| EcoT22I | ATGCAT | 1 cut(s) | 429 |
| FaeI | CATG | 3 cut(s) | 293, 431, 775 |
| FatI | CATG | 3 cut(s) | 289, 427, 771 |
| Fnu4HI | GCNGC | 1 cut(s) | 669 |
| FokI | GGATG | 6 cut(s) | 20, 530, 634, 661, 839, 883 |
| Fsp4HI | GCNGC | 1 cut(s) | 669 |
| FspBI | CTAG | 3 cut(s) | 53, 101, 1063 |
| GluI | GCNGC | 1 cut(s) | 669 |
| GsuI | CTGGAG | 1 cut(s) | 507 |
| HaeIII | GGCC | 2 cut(s) | 15, 377 |
| Hin1II | CATG | 3 cut(s) | 293, 431, 775 |
| HindIII | AAGCTT | 1 cut(s) | 64 |
| HinfI | GANTC | 4 cut(s) | 118, 154, 470, 852 |
| HphI | GGTGA | 5 cut(s) | 326, 465, 818, 891, 1026 |
| Hpy166II | GTNNAC | 2 cut(s) | 991, 1034 |
| Hpy188I | TCNGA | 6 cut(s) | 123, 299, 594, 621, 648, 1045 |
| Hpy188III | TCNNGA | 8 cut(s) | 53, 143, 260, 272, 733, 772, 943, 1007 |
| Hpy8I | GTNNAC | 2 cut(s) | 991, 1034 |
| HpyAV | CCTTC | 3 cut(s) | 5, 83, 304 |
| HpyCH4III | ACNGT | 2 cut(s) | 504, 863 |
| HpyCH4V | TGCA | 6 cut(s) | 97, 341, 368, 427, 701, 968 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 338, 374, 707 |
| HpyF3I | CTNAG | 2 cut(s) | 136, 933 |
| Hsp92II | CATG | 3 cut(s) | 293, 431, 775 |
| Kzo9I | GATC | 2 cut(s) | 580, 584 |
| LmnI | GCTCC | 1 cut(s) | 495 |
| LpnPI | CCDG | 9 cut(s) | 314, 471, 498, 627, 654, 746, 920, 954, 984 |
| Lsp1109I | GCAGC | 1 cut(s) | 655 |
| LweI | GCATC | 2 cut(s) | 414, 615 |
| MaeI | CTAG | 3 cut(s) | 53, 101, 1063 |
| MaeIII | GTNAC | 3 cut(s) | 73, 897, 912 |
| MalI | GATC | 2 cut(s) | 582, 586 |
| MbiI | CCGCTC | 1 cut(s) | 493 |
| MboI | GATC | 2 cut(s) | 580, 584 |
| MboII | GAAGA | 6 cut(s) | 119, 136, 271, 462, 856, 1058 |
| MluCI | AATT | 6 cut(s) | 176, 192, 251, 348, 696, 705 |
| MlyI | GAGTC | 1 cut(s) | 861 |
| MmeI | TCCRAC | 1 cut(s) | 46 |
| Mph1103I | ATGCAT | 1 cut(s) | 429 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1000 |
| MseI | TTAA | 3 cut(s) | 254, 540, 905 |
| MslI | CAYNNNNRTG | 1 cut(s) | 516 |
| MspR9I | CCNGG | 1 cut(s) | 486 |
| Mva1269I | GAATGC | 2 cut(s) | 99, 343 |
| MvaI | CCWGG | 1 cut(s) | 486 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 338, 374, 707 |
| NdeII | GATC | 2 cut(s) | 580, 584 |
| NlaIII | CATG | 3 cut(s) | 293, 431, 775 |
| NmuCI | GTSAC | 2 cut(s) | 73, 897 |
| NsiI | ATGCAT | 1 cut(s) | 429 |
| NspI | RCATGY | 1 cut(s) | 293 |
| PaeI | GCATGC | 1 cut(s) | 293 |
| PagI | TCATGA | 1 cut(s) | 771 |
| PceI | AGGCCT | 1 cut(s) | 15 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 625 |
| PctI | GAATGC | 2 cut(s) | 99, 343 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1000 |
| PfeI | GAWTC | 3 cut(s) | 118, 154, 470 |
| PkrI | GCNGC | 1 cut(s) | 670 |
| PleI | GAGTC | 1 cut(s) | 860 |
| PpsI | GAGTC | 1 cut(s) | 860 |
| PsiI | TTATAA | 1 cut(s) | 383 |
| Psp6I | CCWGG | 1 cut(s) | 484 |
| PspGI | CCWGG | 1 cut(s) | 484 |
| PspPI | GGNCC | 1 cut(s) | 376 |
| RseI | CAYNNNNRTG | 1 cut(s) | 516 |
| SaqAI | TTAA | 3 cut(s) | 254, 540, 905 |
| SatI | GCNGC | 1 cut(s) | 669 |
| Sau3AI | GATC | 2 cut(s) | 580, 584 |
| Sau96I | GGNCC | 1 cut(s) | 376 |
| SchI | GAGTC | 1 cut(s) | 861 |
| ScrFI | CCNGG | 1 cut(s) | 486 |
| SfaNI | GCATC | 2 cut(s) | 414, 615 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 516 |
| SmlI | CTYRAG | 1 cut(s) | 67 |
| SmoI | CTYRAG | 1 cut(s) | 67 |
| SpeI | ACTAGT | 1 cut(s) | 100 |
| SphI | GCATGC | 1 cut(s) | 293 |
| Sse9I | AATT | 6 cut(s) | 176, 192, 251, 348, 696, 705 |
| SseBI | AGGCCT | 1 cut(s) | 15 |
| SsiI | CCGC | 1 cut(s) | 493 |
| SspMI | CTAG | 3 cut(s) | 53, 101, 1063 |
| StuI | AGGCCT | 1 cut(s) | 15 |
| StyD4I | CCNGG | 1 cut(s) | 484 |
| TaaI | ACNGT | 2 cut(s) | 504, 863 |
| TaqI | TCGA | 3 cut(s) | 246, 422, 583 |
| TasI | AATT | 6 cut(s) | 176, 192, 251, 348, 696, 705 |
| TfiI | GAWTC | 3 cut(s) | 118, 154, 470 |
| Tru1I | TTAA | 3 cut(s) | 254, 540, 905 |
| Tru9I | TTAA | 3 cut(s) | 254, 540, 905 |
| TscAI | CASTG | 2 cut(s) | 339, 866 |
| TseFI | GTSAC | 2 cut(s) | 73, 897 |
| TseI | GCWGC | 1 cut(s) | 668 |
| Tsp45I | GTSAC | 2 cut(s) | 73, 897 |
| TspDTI | ATGAA | 4 cut(s) | 24, 279, 788, 887 |
| TspGWI | ACGGA | 1 cut(s) | 1014 |
| TspRI | CASTG | 2 cut(s) | 339, 866 |
| XbaI | TCTAGA | 1 cut(s) | 52 |
| XceI | RCATGY | 1 cut(s) | 293 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1000 |
| XspI | CTAG | 3 cut(s) | 53, 101, 1063 |
| Zsp2I | ATGCAT | 1 cut(s) | 429 |