Rw1G014080

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0022972
Physical Location & Seq
Forward (+)
31390690 .. 31392875
2186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G014080.1

Sequence Viewer

Length: 1926 bp
ATGGTCGTCAAGGAAATCTCATCCACACTGCCAAATGGAACATCTTTAGATGTGGCAATGCATACGGTTGGAATGGGTTCTCGTGTACGAGAAATGTGTAAACTTTTAAAGATTGGGGAAAATTTGGTCCATGTGGTCGGGATATGGGGAATGGGGGGGATTGGCAAGACAACAATTGCTAAATCAGTTTATAATTCAATTGCCCGTAAGTTTGAAGGAACTTGTTTTTTGGCCAATGTTAGAGAAATGTCAGAGTTGCATGAAGGCCTTGCCCGACTACAAGAGACTCTACTTATTGACATTCTAGAGGACAGAAGCTTGAGAGTGACCAATGTTTACGAAGGTATGCAACTAATAGAAGAAAAGTTGAGTCGTAAAAGGGTTCTGTTAGTTCTTGATGACGTGAATCAGGGCAATCAGTTGGACATATTAGCTCAAACCACTTGGTTTGGTCAAGGTAGTAGAATTATCATCACAACAAGAGATAGGCATCTGTTAGCGGTTCATCGAGCTGAAACCATATACCGGGTCGATGTATTAAATGATGATGAAGCTCTTGAACTCTTCAGTTGGCATGCCTTCGGAGGACAGCCATTTGGTGATTATAAAGAACTGGCAATGAATGCAATAGAGTATGCTTATGGTCTTCCATTACTTTTGATAGTTTTAGGTAGTCATCTACGTGGTGGAAGTCCAGATAAATGGAAAGAGACTTTGCATTCCAAAAGAGCCCGTTACATTAGGGTTGAAGATGTGCTTAGACGAAGCTATGATGCATTGGACGATACTGTGAAAATAGCTTTCCTTGACATTGCATGTTTCTTCAAAGGTAAAAAGATGAAATATGTGCAACAAATTCTAGACGATTCTGGACTAGATTTCTCAACCGATGCTATTCAAGAACTAGTAGAAAAGGCCCTTATAACTATTCAAAACCAGCCTCTGGTTGGTGAGGTTATTTTGATGCATGACTTGATAGAGGATATGGGAAAAGATATAGTTCGACAAGAATCACCAGATGAACCTGGAGAGCGTAGTAGATTGTGTTACCACGAGGATGTTGATCATGTTCTGACCACAAAAACAGGAACAGATCAAATCAGAGGCATCATGGTAAAGTTCCCAAAACCAGATGAGATATCTATGTTCTTGTGGCCTGAAAGCTTTTCAAATATGAAAAATTTGAAATTTTTTATAAGTGGTGATGTATGTCTTTCTGGAGATTTTTTTCACTTCGGTCGCTACCAAAATCAAGCCTTTGCCCACCGCCAGGGGAGATGGAATGAGCAATACGACGCAAACGCGCGTAGATCGAAACAGGGAATACACAAATCTAACTCGTCCATGGCAGCCAGTGAACACAGACGGAGGTCTGATGAATATGAACTCAGAGAAGTCGCTCTACTTCTCCCACAACAAGTACCACCTGCCACACGGCCAAATCTAACTCCTCTACGTGTCCGAGAGGCTGGCCCCAGCAACTCCATTACAGAGGAAACGGATTCTCACAATTGTAAGGCTACTGCAGTTGAGGCATCCATAGACCAACCTTCTCCTCCAACACCATCCGACTGTTCTGACATGTCTGACATTGACGTGGAAGACTTGGATTTGGGAAGAGCTATGTCACTCGCTGAGATGAGTTATTCACATGATACCACTATAGATACTGGGTTACTTCTCAATCAGTGCCCGGACCATGCATCTCCACCCTCTATGGTAGACACCATCAGAATGTTGTCAGATGAATTCAAACAACTCCAAATCCGCAAGCGTTTTCTAACGGAGGAAGCAGAATCGATTTCGTCATCAAAGAAACCGAGATTTGACGACCCGCTTGCACTGGTGCCGGTGAACCCTCCAACGTCTCAGCGGCGTAAACGTCGCCTATCTGCAACACCGTCGTCCGGCCTGCACACATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

641

Amino Acids

72.39

Weight (kDa)

5.75

Isoelectric Point (pI)

49.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATPase_2 PF01637 28 - 139 8.6e-06 ATPase domain predominantly from Archaea
NB-ARC PF00931 35 - 194 1.5e-23 NB-ARC domain
WHD_ROQ1 PF23282 266 - 338 5.2e-18 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022972)

Species Orthologous Gene IDs
rosa_laevigata RLG00000029108
rosa_multiflora Rmu_sc0001400.1_g000003
rosa_roxburghii Rroxscaffold_4G00312560
rosa_wichuraiana Rw1G014080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 192, 606, 923, 1196
AarI CACCTGC 1 cut(s) 1435
Acc36I ACCTGC 1 cut(s) 1435
AccB1I GGYRCC 1 cut(s) 1846
AccB7I CCANNNNNTGG 1 cut(s) 943
AccI GTMKAC 1 cut(s) 1722
AccII CGCG 2 cut(s) 1304, 1306
AciI CCGC 5 cut(s) 500, 1267, 1768, 1835, 1873
AcoI YGGCCR 2 cut(s) 231, 1436
AcsI RAATTY 5 cut(s) 121, 855, 1180, 1187, 1748
AcuI CTGAAG 1 cut(s) 550
AfaI GTAC 2 cut(s) 87, 1422
AfiI CCNNNNNNNGG 5 cut(s) 525, 943, 947, 1270, 1907
AflIII ACRYGT 2 cut(s) 1456, 1581
AhlI ACTAGT 1 cut(s) 904
AjiI CACGTC 2 cut(s) 403, 1597
AjnI CCWGG 2 cut(s) 1024, 1269
AluBI AGCT 8 cut(s) 318, 434, 512, 554, 768, 800, 1164, 1622
AluI AGCT 8 cut(s) 318, 434, 512, 554, 768, 800, 1164, 1622
Alw26I GTCTC 3 cut(s) 278, 704, 1872
AlwNI CAGNNNCTG 1 cut(s) 943
AoxI GGCC 7 cut(s) 231, 265, 915, 1154, 1436, 1471, 1909
ApeKI GCWGC 1 cut(s) 1349
ApoI RAATTY 5 cut(s) 121, 855, 1180, 1187, 1748
Asp700I GAANNNNTTC 1 cut(s) 76
AspLEI GCGC 1 cut(s) 1306
AspS9I GGNCC 4 cut(s) 127, 916, 1472, 1696
AsuC2I CCSGG 2 cut(s) 527, 1694
AsuHPI GGTGA 5 cut(s) 611, 962, 1005, 1214, 1864
AvaII GGWCC 2 cut(s) 127, 1696
BaeGI GKGCMC 1 cut(s) 1694
BalI TGGCCA 1 cut(s) 233
BanI GGYRCC 1 cut(s) 1846
BanII GRGCYC 1 cut(s) 733
BarI GAAGNNNNNNTAC 2 cut(s) 1386, 1418
BauI CACGAG 2 cut(s) 81, 1052
BbsI GAAGAC 2 cut(s) 638, 1608
BbvI GCAGC 1 cut(s) 1361
BccI CCATC 3 cut(s) 1272, 1573, 1736
BceAI ACGGC 1 cut(s) 1451
BcgI CGANNNNNNTGC 4 cut(s) 1820, 1854, 1884, 1918
BciT130I CCWGG 2 cut(s) 1026, 1271
BclI TGATCA 1 cut(s) 1063
BcnI CCSGG 2 cut(s) 527, 1694
BcoDI GTCTC 3 cut(s) 278, 704, 1872
BcuI ACTAGT 1 cut(s) 904
BfaI CTAG 4 cut(s) 305, 860, 875, 905
BfmI CTRYAG 2 cut(s) 1524, 1662
BfuAI ACCTGC 1 cut(s) 1435
BisI GCNGC 2 cut(s) 1350, 1874
BlsI GCNGC 2 cut(s) 1351, 1875
Bme1390I CCNGG 4 cut(s) 527, 1026, 1271, 1694
Bme18I GGWCC 2 cut(s) 127, 1696
BmgBI CACGTC 2 cut(s) 403, 1597
BmgT120I GGNCC 4 cut(s) 127, 916, 1472, 1696
BmiI GGNNCC 2 cut(s) 1474, 1848
BmrFI CCNGG 4 cut(s) 527, 1026, 1271, 1694
BmrI ACTGGG 1 cut(s) 1680
BmsI GCATC 7 cut(s) 499, 763, 880, 954, 1116, 1544, 1712
BmuI ACTGGG 1 cut(s) 1680
BoxI GACNNNNGTC 1 cut(s) 1369
BpiI GAAGAC 2 cut(s) 638, 1608
BpmI CTGGAG 2 cut(s) 1047, 1239
BpuEI CTTGAG 1 cut(s) 340
BpuMI CCSGG 2 cut(s) 527, 1694
Bsa29I ATCGAT 1 cut(s) 1799
BsaAI YACGTR 2 cut(s) 683, 1457
BsaBI GATNNNNATC 2 cut(s) 489, 1062
BsaJI CCNNGG 2 cut(s) 1270, 1344
Bsc4I CCNNNNNNNGG 5 cut(s) 525, 943, 947, 1270, 1907
Bse118I RCCGGY 1 cut(s) 1849
Bse1I ACTGG 4 cut(s) 618, 1353, 1675, 1848
Bse3DI GCAATG 3 cut(s) 63, 624, 810
Bse8I GATNNNNATC 2 cut(s) 489, 1062
BseBI CCWGG 2 cut(s) 1026, 1271
BseCI ATCGAT 1 cut(s) 1799
BseDI CCNNGG 2 cut(s) 1270, 1344
BseGI GGATG 4 cut(s) 20, 1063, 1535, 1565
BseJI GATNNNNATC 2 cut(s) 489, 1062
BseLI CCNNNNNNNGG 5 cut(s) 525, 943, 947, 1270, 1907
BseMI GCAATG 3 cut(s) 63, 624, 810
BseMII CTCAG 3 cut(s) 1402, 1626, 1883
BseNI ACTGG 4 cut(s) 618, 1353, 1675, 1848
BseRI GAGGAG 2 cut(s) 1440, 1545
BseSI GKGCMC 1 cut(s) 1694
BseXI GCAGC 1 cut(s) 1361
BseYI CCCAGC 1 cut(s) 1475
BsgI GTGCAG 1 cut(s) 1898
Bsh1236I CGCG 2 cut(s) 1304, 1306
Bsh1285I CGRYCG 1 cut(s) 1240
BshFI GGCC 7 cut(s) 233, 267, 917, 1156, 1438, 1473, 1911
BshNI GGYRCC 1 cut(s) 1846
BshVI ATCGAT 1 cut(s) 1799
BsiEI CGRYCG 1 cut(s) 1240
BsiSI CCGG 4 cut(s) 526, 1694, 1850, 1908
BslI CCNNNNNNNGG 5 cut(s) 525, 943, 947, 1270, 1907
BsmAI GTCTC 3 cut(s) 278, 704, 1872
BsmBI CGTCTC 1 cut(s) 1872
BsmI GAATGC 2 cut(s) 628, 718
BsnI GGCC 7 cut(s) 233, 267, 917, 1156, 1438, 1473, 1911
Bsp1286I GDGCHC 2 cut(s) 733, 1694
Bsp143I GATC 3 cut(s) 1063, 1093, 1310
Bsp19I CCATGG 1 cut(s) 1344
BspACI CCGC 5 cut(s) 500, 1267, 1768, 1835, 1873
BspANI GGCC 7 cut(s) 233, 267, 917, 1156, 1438, 1473, 1911
BspCNI CTCAG 3 cut(s) 1401, 1627, 1882
BspDI ATCGAT 1 cut(s) 1799
BspFNI CGCG 2 cut(s) 1304, 1306
BspLI GGNNCC 2 cut(s) 1474, 1848
BspMAI CTGCAG 1 cut(s) 1528
BspMI ACCTGC 1 cut(s) 1435
BspQI GCTCTTC 1 cut(s) 1612
BspT107I GGYRCC 1 cut(s) 1846
BsrDI GCAATG 3 cut(s) 63, 624, 810
BsrFI RCCGGY 1 cut(s) 1849
BsrI ACTGG 4 cut(s) 618, 1353, 1675, 1848
BssAI RCCGGY 1 cut(s) 1849
BssECI CCNNGG 2 cut(s) 1270, 1344
BssMI GATC 3 cut(s) 1063, 1093, 1310
BssSI CACGAG 2 cut(s) 81, 1052
BssT1I CCWWGG 1 cut(s) 1344
Bst2BI CACGAG 2 cut(s) 81, 1052
Bst2UI CCWGG 2 cut(s) 1026, 1271
Bst4CI ACNGT 4 cut(s) 67, 790, 1574, 1902
Bst6I CTCTTC 2 cut(s) 569, 1612
BstAPI GCANNNNNTGC 1 cut(s) 623
BstBAI YACGTR 2 cut(s) 683, 1457
BstC8I GCNNGC 5 cut(s) 576, 1471, 1772, 1839, 1913
BstDEI CTNAG 4 cut(s) 758, 1388, 1635, 1869
BstDSI CCRYGG 1 cut(s) 1344
BstF5I GGATG 4 cut(s) 20, 1063, 1535, 1565
BstFNI CGCG 2 cut(s) 1304, 1306
BstHHI GCGC 1 cut(s) 1306
BstKTI GATC 3 cut(s) 1066, 1096, 1313
BstMAI GTCTC 3 cut(s) 278, 704, 1872
BstMBI GATC 3 cut(s) 1063, 1093, 1310
BstMCI CGRYCG 1 cut(s) 1240
BstMWI GCNNNNNNNGC 2 cut(s) 623, 1532
BstNI CCWGG 2 cut(s) 1026, 1271
BstNSI RCATGY 3 cut(s) 578, 819, 1585
BstPAI GACNNNNGTC 1 cut(s) 1369
BstSCI CCNGG 4 cut(s) 525, 1024, 1269, 1692
BstSFI CTRYAG 2 cut(s) 1524, 1662
BstSLI GKGCMC 1 cut(s) 1694
BstUI CGCG 2 cut(s) 1304, 1306
BstV1I GCAGC 1 cut(s) 1361
BstV2I GAAGAC 2 cut(s) 638, 1608
BstXI CCANNNNNNTGG 1 cut(s) 702
Bsu15I ATCGAT 1 cut(s) 1799
BsuRI GGCC 7 cut(s) 233, 267, 917, 1156, 1438, 1473, 1911
BsuTUI ATCGAT 1 cut(s) 1799
BtgI CCRYGG 1 cut(s) 1344
BtrI CACGTC 2 cut(s) 403, 1597
BtsCI GGATG 4 cut(s) 20, 1063, 1535, 1565
BtsI GCAGTG 1 cut(s) 26
BtsIMutI CAGTG 4 cut(s) 26, 1360, 1694, 1841
BveI ACCTGC 1 cut(s) 1435
Cac8I GCNNGC 5 cut(s) 576, 1471, 1772, 1839, 1913
CaiI CAGNNNCTG 1 cut(s) 943
CfoI GCGC 1 cut(s) 1306
Cfr10I RCCGGY 1 cut(s) 1849
Cfr13I GGNCC 4 cut(s) 127, 916, 1472, 1696
ClaI ATCGAT 1 cut(s) 1799
CseI GACGC 1 cut(s) 1304
Csp6I GTAC 2 cut(s) 86, 1421
CspCI CAANNNNNGTGG 2 cut(s) 430, 465
CviQI GTAC 2 cut(s) 86, 1421
DdeI CTNAG 4 cut(s) 758, 1388, 1635, 1869
DpnI GATC 3 cut(s) 1065, 1095, 1312
DpnII GATC 3 cut(s) 1063, 1093, 1310
DraI TTTAAA 1 cut(s) 108
EaeI YGGCCR 2 cut(s) 231, 1436
Eam1104I CTCTTC 2 cut(s) 569, 1612
EarI CTCTTC 2 cut(s) 569, 1612
Eco130I CCWWGG 1 cut(s) 1344
Eco147I AGGCCT 1 cut(s) 267
Eco24I GRGCYC 1 cut(s) 733
Eco32I GATATC 1 cut(s) 1140
Eco47I GGWCC 2 cut(s) 127, 1696
Eco57I CTGAAG 1 cut(s) 550
EcoO109I RGGNCCY 1 cut(s) 916
EcoRI GAATTC 1 cut(s) 1748
EcoRII CCWGG 2 cut(s) 1024, 1269
EcoRV GATATC 1 cut(s) 1140
EcoT14I CCWWGG 1 cut(s) 1344
EcoT22I ATGCAT 4 cut(s) 63, 778, 969, 1705
EcoT38I GRGCYC 1 cut(s) 733
ErhI CCWWGG 1 cut(s) 1344
Esp3I CGTCTC 1 cut(s) 1872
FalI AAGNNNNNCTT 2 cut(s) 741, 773
FauI CCCGC 1 cut(s) 1842
FbaI TGATCA 1 cut(s) 1063
FblI GTMKAC 1 cut(s) 1722
Fnu4HI GCNGC 2 cut(s) 1350, 1874
FokI GGATG 4 cut(s) 7, 1070, 1522, 1552
FriOI GRGCYC 1 cut(s) 733
Fsp4HI GCNGC 2 cut(s) 1350, 1874
FspBI CTAG 4 cut(s) 305, 860, 875, 905
GlaI GCGC 1 cut(s) 1305
GluI GCNGC 2 cut(s) 1350, 1874
GsaI CCCAGC 1 cut(s) 1479
GsuI CTGGAG 2 cut(s) 1047, 1239
HaeIII GGCC 7 cut(s) 233, 267, 917, 1156, 1438, 1473, 1911
HapII CCGG 4 cut(s) 526, 1694, 1850, 1908
HgaI GACGC 1 cut(s) 1304
HhaI GCGC 1 cut(s) 1306
Hin6I GCGC 1 cut(s) 1304
HinP1I GCGC 1 cut(s) 1304
HindIII AAGCTT 2 cut(s) 316, 1162
HinfI GANTC 7 cut(s) 286, 370, 406, 866, 1010, 1502, 1796
HpaII CCGG 4 cut(s) 526, 1694, 1850, 1908
HphI GGTGA 5 cut(s) 611, 962, 1005, 1214, 1864
Hpy166II GTNNAC 7 cut(s) 86, 101, 337, 1358, 1723, 1855, 1880
Hpy188III TCNNGA 9 cut(s) 139, 305, 395, 557, 695, 860, 870, 899, 1218
Hpy8I GTNNAC 7 cut(s) 86, 101, 337, 1358, 1723, 1855, 1880
Hpy99I CGWCG 3 cut(s) 1298, 1887, 1906
HpyAV CCTTC 5 cut(s) 209, 257, 335, 589, 1560
HpyCH4III ACNGT 4 cut(s) 67, 790, 1574, 1902
HpyCH4IV ACGT 6 cut(s) 402, 682, 1456, 1596, 1865, 1882
HpyF10VI GCNNNNNNNGC 2 cut(s) 623, 1532
HpyF3I CTNAG 4 cut(s) 758, 1388, 1635, 1869
HpySE526I ACGT 6 cut(s) 402, 682, 1456, 1596, 1865, 1882
HspAI GCGC 1 cut(s) 1304
Ksp22I TGATCA 1 cut(s) 1063
Kzo9I GATC 3 cut(s) 1063, 1093, 1310
LguI GCTCTTC 1 cut(s) 1612
Lsp1109I GCAGC 1 cut(s) 1361
LweI GCATC 7 cut(s) 499, 763, 880, 954, 1116, 1544, 1712
MaeI CTAG 4 cut(s) 305, 860, 875, 905
MaeII ACGT 6 cut(s) 402, 682, 1456, 1596, 1865, 1882
MaeIII GTNAC 5 cut(s) 325, 734, 1046, 1626, 1674
MalI GATC 3 cut(s) 1065, 1095, 1312
MboI GATC 3 cut(s) 1063, 1093, 1310
MboII GAAGA 7 cut(s) 371, 556, 638, 761, 814, 1613, 1629
MfeI CAATTG 3 cut(s) 174, 198, 1510
MhlI GDGCHC 2 cut(s) 733, 1694
MlsI TGGCCA 1 cut(s) 233
MluNI TGGCCA 1 cut(s) 233
MlyI GAGTC 2 cut(s) 280, 379
MmeI TCCRAC 5 cut(s) 49, 402, 1583, 1593, 1886
Mox20I TGGCCA 1 cut(s) 233
Mph1103I ATGCAT 4 cut(s) 63, 778, 969, 1705
MroXI GAANNNNTTC 1 cut(s) 76
MscI TGGCCA 1 cut(s) 233
MseI TTAA 2 cut(s) 107, 539
MslI CAYNNNNRTG 4 cut(s) 681, 1056, 1595, 1733
Msp20I TGGCCA 1 cut(s) 233
MspA1I CMGCKG 1 cut(s) 1873
MspI CCGG 4 cut(s) 526, 1694, 1850, 1908
MspR9I CCNGG 4 cut(s) 527, 1026, 1271, 1694
MunI CAATTG 3 cut(s) 174, 198, 1510
Mva1269I GAATGC 2 cut(s) 628, 718
MvaI CCWGG 2 cut(s) 1026, 1271
MvnI CGCG 2 cut(s) 1304, 1306
MwoI GCNNNNNNNGC 2 cut(s) 623, 1532
NciI CCSGG 2 cut(s) 527, 1694
NcoI CCATGG 1 cut(s) 1344
NdeII GATC 3 cut(s) 1063, 1093, 1310
NlaIV GGNNCC 2 cut(s) 1474, 1848
NmuCI GTSAC 2 cut(s) 325, 1626
NsiI ATGCAT 4 cut(s) 63, 778, 969, 1705
NspI RCATGY 3 cut(s) 578, 819, 1585
PaeI GCATGC 1 cut(s) 578
PaqCI CACCTGC 1 cut(s) 1435
PceI AGGCCT 1 cut(s) 267
PciI ACATGT 1 cut(s) 1581
PciSI GCTCTTC 1 cut(s) 1612
PctI GAATGC 2 cut(s) 628, 718
PdmI GAANNNNTTC 1 cut(s) 76
PfeI GAWTC 5 cut(s) 406, 866, 1010, 1502, 1796
PflMI CCANNNNNTGG 1 cut(s) 943
PkrI GCNGC 2 cut(s) 1351, 1875
PleI GAGTC 2 cut(s) 280, 378
PpsI GAGTC 2 cut(s) 280, 378
Ppu21I YACGTR 2 cut(s) 683, 1457
PscI ACATGT 1 cut(s) 1581
PshAI GACNNNNGTC 1 cut(s) 1369
PsiI TTATAA 4 cut(s) 192, 606, 923, 1196
Psp6I CCWGG 2 cut(s) 1024, 1269
PspFI CCCAGC 1 cut(s) 1475
PspGI CCWGG 2 cut(s) 1024, 1269
PspN4I GGNNCC 2 cut(s) 1474, 1848
PspPI GGNCC 4 cut(s) 127, 916, 1472, 1696
PstI CTGCAG 1 cut(s) 1528
PstNI CAGNNNCTG 1 cut(s) 943
RsaI GTAC 2 cut(s) 87, 1422
RsaNI GTAC 2 cut(s) 86, 1421
RseI CAYNNNNRTG 4 cut(s) 681, 1056, 1595, 1733
SapI GCTCTTC 1 cut(s) 1612
SaqAI TTAA 2 cut(s) 107, 539
SatI GCNGC 2 cut(s) 1350, 1874
Sau3AI GATC 3 cut(s) 1063, 1093, 1310
Sau96I GGNCC 4 cut(s) 127, 916, 1472, 1696
SchI GAGTC 2 cut(s) 280, 379
ScrFI CCNGG 4 cut(s) 527, 1026, 1271, 1694
SduI GDGCHC 2 cut(s) 733, 1694
SfaNI GCATC 7 cut(s) 499, 763, 880, 954, 1116, 1544, 1712
SfcI CTRYAG 2 cut(s) 1524, 1662
SinI GGWCC 2 cut(s) 127, 1696
SmiMI CAYNNNNRTG 4 cut(s) 681, 1056, 1595, 1733
SmlI CTYRAG 1 cut(s) 319
SmoI CTYRAG 1 cut(s) 319
SpeI ACTAGT 1 cut(s) 904
SphI GCATGC 1 cut(s) 578
SseBI AGGCCT 1 cut(s) 267
SsiI CCGC 5 cut(s) 500, 1267, 1768, 1835, 1873
SspMI CTAG 4 cut(s) 305, 860, 875, 905
StuI AGGCCT 1 cut(s) 267
StyD4I CCNGG 4 cut(s) 525, 1024, 1269, 1692
StyI CCWWGG 1 cut(s) 1344
TaaI ACNGT 4 cut(s) 67, 790, 1574, 1902
TaiI ACGT 6 cut(s) 405, 685, 1459, 1599, 1868, 1885
TaqI TCGA 5 cut(s) 508, 531, 1003, 1313, 1799
TaqII GACCGA 1 cut(s) 1226
TauI GCSGC 1 cut(s) 1876
TfiI GAWTC 5 cut(s) 406, 866, 1010, 1502, 1796
Tru1I TTAA 2 cut(s) 107, 539
Tru9I TTAA 2 cut(s) 107, 539
TscAI CASTG 4 cut(s) 33, 1360, 1694, 1848
TseFI GTSAC 2 cut(s) 325, 1626
TseI GCWGC 1 cut(s) 1349
Tsp45I GTSAC 2 cut(s) 325, 1626
TspGWI ACGGA 3 cut(s) 1381, 1514, 1799
TspRI CASTG 4 cut(s) 33, 1360, 1694, 1848
Van91I CCANNNNNTGG 1 cut(s) 943
VpaK11BI GGWCC 2 cut(s) 127, 1696
XapI RAATTY 5 cut(s) 121, 855, 1180, 1187, 1748
XbaI TCTAGA 2 cut(s) 304, 859
XceI RCATGY 3 cut(s) 578, 819, 1585
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XmiI GTMKAC 1 cut(s) 1722
XmnI GAANNNNTTC 1 cut(s) 76
XspI CTAG 4 cut(s) 305, 860, 875, 905
Zsp2I ATGCAT 4 cut(s) 63, 778, 969, 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.