No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0168191 |
| rosa_laevigata | RLG00000010325 RLG00000033848 |
| rosa_roxburghii | Rroxscaffold_1G00022850 Rroxscaffold_2G00136820 Rroxscaffold_7G00186840 |
| rosa_rugosa | Rorug01G0062700 Rorug05G0103400 Rorug05G0151700 Rorug05G0160200 |
| rosa_samantha | Rh1AG038800 |
| rosa_wichuraiana | Rw6G022200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 213 |
| AciI | CCGC | 1 cut(s) | 52 |
| AcuI | CTGAAG | 1 cut(s) | 147 |
| AfaI | GTAC | 1 cut(s) | 17 |
| AflIII | ACRYGT | 1 cut(s) | 211 |
| AgsI | TTSAA | 2 cut(s) | 266, 283 |
| AluBI | AGCT | 1 cut(s) | 261 |
| AluI | AGCT | 1 cut(s) | 261 |
| Alw26I | GTCTC | 2 cut(s) | 83, 341 |
| ApeKI | GCWGC | 1 cut(s) | 196 |
| AspS9I | GGNCC | 1 cut(s) | 288 |
| AvaII | GGWCC | 1 cut(s) | 288 |
| BaeGI | GKGCMC | 1 cut(s) | 62 |
| BbvI | GCAGC | 1 cut(s) | 183 |
| BcoDI | GTCTC | 2 cut(s) | 83, 341 |
| BisI | GCNGC | 1 cut(s) | 197 |
| BlsI | GCNGC | 1 cut(s) | 198 |
| Bme18I | GGWCC | 1 cut(s) | 288 |
| BmgT120I | GGNCC | 1 cut(s) | 288 |
| BsaBI | GATNNNNATC | 1 cut(s) | 152 |
| Bse8I | GATNNNNATC | 1 cut(s) | 152 |
| BseGI | GGATG | 1 cut(s) | 236 |
| BseJI | GATNNNNATC | 1 cut(s) | 152 |
| BseSI | GKGCMC | 1 cut(s) | 62 |
| BseXI | GCAGC | 1 cut(s) | 183 |
| BsgI | GTGCAG | 1 cut(s) | 236 |
| Bsh1236I | CGCG | 1 cut(s) | 213 |
| BsiSI | CCGG | 1 cut(s) | 200 |
| BsiWI | CGTACG | 1 cut(s) | 15 |
| BsmAI | GTCTC | 2 cut(s) | 83, 341 |
| Bsp1286I | GDGCHC | 1 cut(s) | 62 |
| Bsp143I | GATC | 1 cut(s) | 153 |
| BspACI | CCGC | 1 cut(s) | 52 |
| BspFNI | CGCG | 1 cut(s) | 213 |
| BssMI | GATC | 1 cut(s) | 153 |
| Bst4CI | ACNGT | 3 cut(s) | 43, 141, 193 |
| Bst6I | CTCTTC | 3 cut(s) | 86, 122, 166 |
| BstC8I | GCNNGC | 1 cut(s) | 215 |
| BstF5I | GGATG | 1 cut(s) | 236 |
| BstFNI | CGCG | 1 cut(s) | 213 |
| BstKTI | GATC | 1 cut(s) | 156 |
| BstMAI | GTCTC | 2 cut(s) | 83, 341 |
| BstMBI | GATC | 1 cut(s) | 153 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 267 |
| BstNSI | RCATGY | 1 cut(s) | 58 |
| BstSLI | GKGCMC | 1 cut(s) | 62 |
| BstUI | CGCG | 1 cut(s) | 213 |
| BstV1I | GCAGC | 1 cut(s) | 183 |
| BtsCI | GGATG | 1 cut(s) | 236 |
| BtsI | GCAGTG | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 2 cut(s) | 85, 198 |
| Cac8I | GCNNGC | 1 cut(s) | 215 |
| Cfr13I | GGNCC | 1 cut(s) | 288 |
| Csp6I | GTAC | 1 cut(s) | 16 |
| CviAII | CATG | 1 cut(s) | 55 |
| CviJI | RGCY | 1 cut(s) | 261 |
| CviKI_1 | RGCY | 1 cut(s) | 261 |
| CviQI | GTAC | 1 cut(s) | 16 |
| DpnI | GATC | 1 cut(s) | 155 |
| DpnII | GATC | 1 cut(s) | 153 |
| Eam1104I | CTCTTC | 3 cut(s) | 86, 122, 166 |
| EarI | CTCTTC | 3 cut(s) | 86, 122, 166 |
| Eco47I | GGWCC | 1 cut(s) | 288 |
| Eco57I | CTGAAG | 1 cut(s) | 147 |
| FaeI | CATG | 1 cut(s) | 58 |
| FaiI | YATR | 3 cut(s) | 56, 72, 243 |
| FatI | CATG | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 1 cut(s) | 197 |
| FokI | GGATG | 1 cut(s) | 243 |
| Fsp4HI | GCNGC | 1 cut(s) | 197 |
| GluI | GCNGC | 1 cut(s) | 197 |
| HapII | CCGG | 1 cut(s) | 200 |
| Hin1II | CATG | 1 cut(s) | 58 |
| HinfI | GANTC | 1 cut(s) | 178 |
| HpaII | CCGG | 1 cut(s) | 200 |
| Hpy188I | TCNGA | 2 cut(s) | 177, 288 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 336 |
| HpyAV | CCTTC | 2 cut(s) | 220, 320 |
| HpyCH4III | ACNGT | 3 cut(s) | 43, 141, 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 18 |
| HpyCH4V | TGCA | 2 cut(s) | 46, 217 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 267 |
| HpySE526I | ACGT | 1 cut(s) | 18 |
| Hsp92II | CATG | 1 cut(s) | 58 |
| Kzo9I | GATC | 1 cut(s) | 153 |
| LpnPI | CCDG | 3 cut(s) | 195, 213, 286 |
| Lsp1109I | GCAGC | 1 cut(s) | 183 |
| MaeII | ACGT | 1 cut(s) | 18 |
| MalI | GATC | 1 cut(s) | 155 |
| MboI | GATC | 1 cut(s) | 153 |
| MboII | GAAGA | 5 cut(s) | 73, 93, 139, 153, 235 |
| MhlI | GDGCHC | 1 cut(s) | 62 |
| MluCI | AATT | 1 cut(s) | 292 |
| MluI | ACGCGT | 1 cut(s) | 211 |
| MnlI | CCTC | 3 cut(s) | 72, 106, 111 |
| MspI | CCGG | 1 cut(s) | 200 |
| MvnI | CGCG | 1 cut(s) | 213 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 267 |
| NdeII | GATC | 1 cut(s) | 153 |
| NlaIII | CATG | 1 cut(s) | 58 |
| NspI | RCATGY | 1 cut(s) | 58 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 210 |
| PfeI | GAWTC | 1 cut(s) | 178 |
| Pfl23II | CGTACG | 1 cut(s) | 15 |
| PkrI | GCNGC | 1 cut(s) | 198 |
| PspLI | CGTACG | 1 cut(s) | 15 |
| PspPI | GGNCC | 1 cut(s) | 288 |
| RsaI | GTAC | 1 cut(s) | 17 |
| RsaNI | GTAC | 1 cut(s) | 16 |
| SatI | GCNGC | 1 cut(s) | 197 |
| Sau3AI | GATC | 1 cut(s) | 153 |
| Sau96I | GGNCC | 1 cut(s) | 288 |
| SduI | GDGCHC | 1 cut(s) | 62 |
| SetI | ASST | 4 cut(s) | 21, 263, 275, 359 |
| SgeI | CNNG | 8 cut(s) | 67, 194, 212, 224, 226, 249, 285, 348 |
| SinI | GGWCC | 1 cut(s) | 288 |
| Sse9I | AATT | 1 cut(s) | 292 |
| SsiI | CCGC | 1 cut(s) | 52 |
| TaaI | ACNGT | 3 cut(s) | 43, 141, 193 |
| TaiI | ACGT | 1 cut(s) | 21 |
| TaqI | TCGA | 1 cut(s) | 146 |
| TasI | AATT | 1 cut(s) | 292 |
| TfiI | GAWTC | 1 cut(s) | 178 |
| TscAI | CASTG | 2 cut(s) | 92, 198 |
| TseI | GCWGC | 1 cut(s) | 196 |
| TspDTI | ATGAA | 3 cut(s) | 17, 82, 222 |
| TspRI | CASTG | 2 cut(s) | 92, 198 |
| VpaK11BI | GGWCC | 1 cut(s) | 288 |
| XceI | RCATGY | 1 cut(s) | 58 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 298 |