Rorug05G0160200

flavanone 4-reductase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000322
Physical Location & Seq
Reverse (-)
14919488 .. 14923295
3808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0160200.1

Sequence Viewer

Length: 2169 bp
ATGCCAGAGTTTCATACCTACAAAGTTGCTAATGCCCAGAAAATGTTATTCAAAGCTCTGCTTCTCTTCCTTCTCTTCCGATTTTGCGAATCCAGGGACACCATAACATGGAACCAAGAACAATTGAAGGATGATGGTGGAGTTTTAGTGTCCAAACAGAGCAAGTTCGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCTACCGGTATGTTGGAATCTGGTATTCTCAGACTAGAGTACCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTCTGGTATGCTCAAAATAAACGGGTATGGAGAACTAGTCCTTTATGCTTATAACATGGAGAGCACTCCTATTTGGTCTACTAATGTGTCGCGGTCGGTTCAAAATGTTAACACAAGCACTTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGTGTTCCAGGATGATAATAATGAAAACTTTTTATGGCAAAGTTTTGATCATCCCACAGATACTTTAATTCCAGGTATGAAAGTTGGGGTGAATTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGCAATTGGGGACTATACCTTAAGGCTCTATCCAAATCAGATTGCATCCCCCGAATTTTTTATGTACAAGGGTTTGAGAAAGTATTGGCGAAGTCCAGGGCCAACGACTAGTGCGGTCACTAATCAAGAGGAAACTTATTATTCCATGGATGACACCAATGCAATTACAAGAATAACACTGTCTGATTCTGTGGAACGGCGCCTTACATGGGATGACGGTGGCCTTCAATGGAAGGAAGAATTTTCTGCACCGAAGTCCCGGTGTGACTGGTATGGACAGTGTGGTGCCAACAGCAAATGTTTCCCTGACAATGTTCGGCAGTTTGAGTGCGACTGTTTACCAGGGTATGAGCCTAGTTCTATAAATGATTGGAATCAGAAAAATGGGTCGGGTGGATGTGTGAGTAAGCGAGTTGGTGTATCAAAGTGCGGGAATAGAGATGGGTTTGTTAATGTGGCAAGAGTTAGTTGTCCAGACGCATCGATAGCATCACGGTTGAGAACAGGTATGAGTGCCAAAGAGTGTGAGCAGGACTGCTTAAGAAATTGTTCTTGCACCGCATATATGACCATTGACAATGAAGGACTTGTGGATTGCTTGACATGGTATGATGTCTTGATGGACATTTTAGAGTTCACAGAGTTTGGACACGATTTCTACGTTCGTGTGGATCACATCGAATTAACTGAGAATGCTAGAAAATCAAAAGGTTTCTTGGAAAGAAGGGGTATGCTGGTTATTCCAATACTCTGTGCTCTGCTAGCATTGGTACTAATCATTATGTGCGCCTGCTCGTGGCACAAGAAAAGGAGGAATACAACGGAATTTGTGGAGGCGGATGAACTGGAGGAAACCAAGAGACACCCCGAATTGCAATTTTTTGATTTGAACACACTAATGTCAGCCACAGATAACTTCTCTCATGTCAATGAACTTGGCCAAGGTGGTTTTGGCTCTGTTTATAAGGGTCAGTTACCAAATGAGCAAAAGGTAGCTGTAAAAAGGTTGTCTAAAACATCAGGACAAGGGACTGAAGAATTCAAAAATGAAGTTGCACTTATAGCAGGACTTCAACACCGCAATCTTGTAAAGCTCTTAGGCTGCTGTATAAAGGGGGAAGAACGGATGTTAGTCCTGGAATACATGCCGAACAAAAGCTTGGACTCATTTCTCTTTGATCACCGAAGGCGGTCCTTCTTGGATTGGGAAAAGCGTTTTGAAATTATCAACGGGATTGCTCGTGGAATTCTGTATCTTCACCAAGACTCAAGATTGAGGATCATCCATAGAGATCTAAAAACCAGCAATGTTCTTCTAGATTCTGAAATGAACCCAAAAATTTCCGACTTTGGCATGGCAAGAATATTTGATGGTGACCAAGTTCAGAATAAAACGAACCGAGTTGTTGGAACATATGGCTACATGTCACCAGAGTATGCAGTGTTTGGCAGATTTTCTACTAAATCAGATGTCTTTAGTTTTGGGATCATATTGTTAGAGGTTGTATCTGGCAAAAGAAACAATGGTTTTTCACAAGAGGATCCTTCCATGAACTTGATAAGACATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Epimerase

Protein Analysis

722

Amino Acids

82.37

Weight (kDa)

6.14

Isoelectric Point (pI)

46.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 84 - 194 6.3e-37 D-mannose binding lectin
S_locus_glycop PF00954 239 - 318 2.7e-13 S-locus glycoprotein domain
PAN_2 PF08276 342 - 408 6.2e-15 PAN-like domain
Pkinase PF00069 506 - 706 4.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 508 - 704 6e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000322)

Species Orthologous Gene IDs
rosa_rugosa Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 345, 1560
AccB1I GGYRCC 2 cut(s) 795, 881
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 1 cut(s) 371
AccII CGCG 1 cut(s) 385
AciI CCGC 7 cut(s) 385, 710, 1026, 1155, 1433, 1675, 1786
AclWI GGATC 5 cut(s) 1275, 1883, 2090, 2132, 2145
AcoI YGGCCR 1 cut(s) 1534
AcsI RAATTY 7 cut(s) 193, 650, 836, 1421, 1634, 1842, 1935
AcuI CTGAAG 2 cut(s) 166, 1650
AcyI GRCGYC 1 cut(s) 796
AfaI GTAC 3 cut(s) 240, 662, 1368
AfiI CCNNNNNNNGG 4 cut(s) 108, 602, 805, 1392
AflII CTTAAG 2 cut(s) 616, 1135
AflIII ACRYGT 2 cut(s) 2019, 2161
AgeI ACCGGT 1 cut(s) 204
AgsI TTSAA 8 cut(s) 52, 127, 395, 824, 1486, 1639, 1670, 1817
AhlI ACTAGT 2 cut(s) 328, 704
AjnI CCWGG 6 cut(s) 92, 456, 520, 691, 937, 1731
AjuI GAANNNNNNNTTGG 2 cut(s) 1739, 1771
AluBI AGCT 6 cut(s) 56, 201, 427, 1592, 1690, 1755
AluI AGCT 6 cut(s) 56, 201, 427, 1592, 1690, 1755
Alw21I GWGCWC 2 cut(s) 359, 1354
Alw26I GTCTC 1 cut(s) 1450
AlwI GGATC 5 cut(s) 1275, 1883, 2090, 2132, 2145
AoxI GGCC 3 cut(s) 695, 817, 1534
ApeKI GCWGC 1 cut(s) 1698
ApoI RAATTY 7 cut(s) 193, 650, 836, 1421, 1634, 1842, 1935
AsiGI ACCGGT 1 cut(s) 204
Asp700I GAANNNNTTC 1 cut(s) 1144
AspLEI GCGC 2 cut(s) 798, 1385
AspS9I GGNCC 2 cut(s) 695, 1788
AsuC2I CCSGG 2 cut(s) 189, 856
AsuHPI GGTGA 5 cut(s) 550, 1769, 1847, 1982, 2016
AsuII TTCGAA 1 cut(s) 168
AsuNHI GCTAGC 1 cut(s) 1357
AvaII GGWCC 1 cut(s) 1788
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BalI TGGCCA 1 cut(s) 1536
BamHI GGATCC 1 cut(s) 2137
BanI GGYRCC 2 cut(s) 795, 881
BauI CACGAG 2 cut(s) 1390, 1836
Bbv12I GWGCWC 2 cut(s) 359, 1354
BbvI GCAGC 1 cut(s) 1685
BccI CCATC 5 cut(s) 128, 290, 1031, 1210, 1961
BceAI ACGGC 1 cut(s) 809
BciT130I CCWGG 6 cut(s) 94, 458, 522, 693, 939, 1733
BclI TGATCA 2 cut(s) 496, 1774
BcnI CCSGG 2 cut(s) 189, 856
BcoDI GTCTC 1 cut(s) 1450
BcuI ACTAGT 2 cut(s) 328, 704
BfaI CTAG 9 cut(s) 198, 234, 329, 446, 705, 951, 1293, 1358, 1913
BfoI RGCGCY 1 cut(s) 799
BfrI CTTAAG 2 cut(s) 616, 1135
BglII AGATCT 1 cut(s) 1888
BisI GCNGC 1 cut(s) 1699
BlsI GCNGC 1 cut(s) 1700
Bme1390I CCNGG 8 cut(s) 94, 189, 458, 522, 693, 856, 939, 1733
Bme18I GGWCC 1 cut(s) 1788
BmgT120I GGNCC 2 cut(s) 695, 1788
BmiI GGNNCC 4 cut(s) 113, 797, 883, 2139
BmrFI CCNGG 8 cut(s) 94, 189, 458, 522, 693, 856, 939, 1733
BmrI ACTGGG 1 cut(s) 561
BmsI GCATC 3 cut(s) 650, 1085, 1094
BmtI GCTAGC 1 cut(s) 1361
BmuI ACTGGG 1 cut(s) 561
BpmI CTGGAG 1 cut(s) 1463
Bpu14I TTCGAA 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 1849
BpuMI CCSGG 2 cut(s) 189, 856
Bsa29I ATCGAT 1 cut(s) 1079
BsaBI GATNNNNATC 1 cut(s) 969
BsaHI GRCGYC 1 cut(s) 796
BsaJI CCNNGG 6 cut(s) 93, 187, 692, 741, 938, 1537
BsaWI WCCGGW 1 cut(s) 204
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 315, 345
Bsc4I CCNNNNNNNGG 4 cut(s) 108, 602, 805, 1392
Bse118I RCCGGY 1 cut(s) 204
Bse1I ACTGG 3 cut(s) 556, 869, 1446
Bse3DI GCAATG 1 cut(s) 1909
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 6 cut(s) 94, 458, 522, 693, 939, 1733
BseCI ATCGAT 1 cut(s) 1079
BseDI CCNNGG 6 cut(s) 93, 187, 692, 741, 938, 1537
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 4 cut(s) 108, 602, 805, 1392
BseMI GCAATG 1 cut(s) 1909
BseMII CTCAG 2 cut(s) 242, 1275
BseNI ACTGG 3 cut(s) 556, 869, 1446
BseXI GCAGC 1 cut(s) 1685
BsgI GTGCAG 2 cut(s) 405, 828
Bsh1236I CGCG 1 cut(s) 385
Bsh1285I CGRYCG 1 cut(s) 389
BshFI GGCC 3 cut(s) 697, 819, 1536
BshNI GGYRCC 2 cut(s) 795, 881
BshTI ACCGGT 1 cut(s) 204
BshVI ATCGAT 1 cut(s) 1079
BsiEI CGRYCG 1 cut(s) 389
BsiHKAI GWGCWC 2 cut(s) 359, 1354
BsiSI CCGG 3 cut(s) 189, 205, 856
BslFI GGGAC 4 cut(s) 110, 620, 838, 1639
BslI CCNNNNNNNGG 4 cut(s) 108, 602, 805, 1392
BsmAI GTCTC 1 cut(s) 1450
BsmFI GGGAC 4 cut(s) 110, 620, 838, 1639
BsmI GAATGC 1 cut(s) 1294
BsnI GGCC 3 cut(s) 697, 819, 1536
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 2 cut(s) 359, 1354
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
Bsp19I CCATGG 1 cut(s) 741
BspACI CCGC 7 cut(s) 385, 710, 1026, 1155, 1433, 1675, 1786
BspANI GGCC 3 cut(s) 697, 819, 1536
BspCNI CTCAG 2 cut(s) 241, 1276
BspDI ATCGAT 1 cut(s) 1079
BspFNI CGCG 1 cut(s) 385
BspLI GGNNCC 4 cut(s) 113, 797, 883, 2139
BspOI GCTAGC 1 cut(s) 1361
BspPI GGATC 5 cut(s) 1275, 1883, 2090, 2132, 2145
BspT104I TTCGAA 1 cut(s) 168
BspT107I GGYRCC 2 cut(s) 795, 881
BspTI CTTAAG 2 cut(s) 616, 1135
BsrDI GCAATG 1 cut(s) 1909
BsrFI RCCGGY 1 cut(s) 204
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 3 cut(s) 556, 869, 1446
BssAI RCCGGY 1 cut(s) 204
BssECI CCNNGG 6 cut(s) 93, 187, 692, 741, 938, 1537
BssMI GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
BssNI GRCGYC 1 cut(s) 796
BssSI CACGAG 2 cut(s) 1390, 1836
BssT1I CCWWGG 2 cut(s) 741, 1537
Bst2BI CACGAG 2 cut(s) 1390, 1836
Bst2UI CCWGG 6 cut(s) 94, 458, 522, 693, 939, 1733
Bst4CI ACNGT 6 cut(s) 253, 777, 815, 876, 932, 1092
Bst6I CTCTTC 2 cut(s) 71, 80
BstACI GRCGYC 1 cut(s) 796
BstAFI CTTAAG 2 cut(s) 616, 1135
BstAUI TGTACA 1 cut(s) 660
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 2 cut(s) 1359, 1387
BstDEI CTNAG 3 cut(s) 228, 1284, 1693
BstDSI CCRYGG 1 cut(s) 741
BstEII GGTNACC 1 cut(s) 1970
BstFNI CGCG 1 cut(s) 385
BstH2I RGCGCY 1 cut(s) 799
BstHHI GCGC 2 cut(s) 798, 1385
BstKTI GATC 7 cut(s) 499, 1270, 1777, 1878, 1891, 2085, 2140
BstMAI GTCTC 1 cut(s) 1450
BstMBI GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
BstMCI CGRYCG 1 cut(s) 389
BstMWI GCNNNNNNNGC 3 cut(s) 1082, 1358, 1658
BstNI CCWGG 6 cut(s) 94, 458, 522, 693, 939, 1733
BstNSI RCATGY 3 cut(s) 1744, 2023, 2165
BstPI GGTNACC 1 cut(s) 1970
BstSCI CCNGG 8 cut(s) 92, 187, 456, 520, 691, 854, 937, 1731
BstUI CGCG 1 cut(s) 385
BstV1I GCAGC 1 cut(s) 1685
BstX2I RGATCY 2 cut(s) 1888, 2137
BstYI RGATCY 2 cut(s) 1888, 2137
Bsu15I ATCGAT 1 cut(s) 1079
BsuRI GGCC 3 cut(s) 697, 819, 1536
BsuTUI ATCGAT 1 cut(s) 1079
BtgI CCRYGG 1 cut(s) 741
BtsI GCAGTG 1 cut(s) 2043
BtsIMutI CAGTG 4 cut(s) 258, 773, 881, 2043
Cac8I GCNNGC 2 cut(s) 1359, 1387
CfoI GCGC 2 cut(s) 798, 1385
Cfr10I RCCGGY 1 cut(s) 204
Cfr13I GGNCC 2 cut(s) 695, 1788
ClaI ATCGAT 1 cut(s) 1079
CseI GACGC 1 cut(s) 1082
Csp6I GTAC 3 cut(s) 239, 661, 1367
CspAI ACCGGT 1 cut(s) 204
CviQI GTAC 3 cut(s) 239, 661, 1367
DdeI CTNAG 3 cut(s) 228, 1284, 1693
DinI GGCGCC 1 cut(s) 797
DpnI GATC 7 cut(s) 498, 1269, 1776, 1877, 1890, 2084, 2139
DpnII GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
EaeI YGGCCR 1 cut(s) 1534
Eam1104I CTCTTC 2 cut(s) 71, 80
EarI CTCTTC 2 cut(s) 71, 80
EciI GGCGGA 1 cut(s) 1448
Eco130I CCWWGG 2 cut(s) 741, 1537
Eco47I GGWCC 1 cut(s) 1788
Eco57I CTGAAG 2 cut(s) 166, 1650
Eco91I GGTNACC 1 cut(s) 1970
EcoO65I GGTNACC 1 cut(s) 1970
EcoRI GAATTC 2 cut(s) 1634, 1842
EcoRII CCWGG 6 cut(s) 92, 456, 520, 691, 937, 1731
EcoT14I CCWWGG 2 cut(s) 741, 1537
EgeI GGCGCC 1 cut(s) 797
EheI GGCGCC 1 cut(s) 797
ErhI CCWWGG 2 cut(s) 741, 1537
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 1638, 1670
FaqI GGGAC 4 cut(s) 110, 620, 838, 1639
FauI CCCGC 1 cut(s) 1019
FauNDI CATATG 1 cut(s) 2011
FbaI TGATCA 2 cut(s) 496, 1774
FblI GTMKAC 1 cut(s) 371
Fnu4HI GCNGC 1 cut(s) 1699
Fsp4HI GCNGC 1 cut(s) 1699
FspBI CTAG 9 cut(s) 198, 234, 329, 446, 705, 951, 1293, 1358, 1913
GlaI GCGC 2 cut(s) 797, 1384
GluI GCNGC 1 cut(s) 1699
GsuI CTGGAG 1 cut(s) 1463
HaeII RGCGCY 1 cut(s) 799
HaeIII GGCC 3 cut(s) 697, 819, 1536
HapII CCGG 3 cut(s) 189, 205, 856
HgaI GACGC 1 cut(s) 1082
HhaI GCGC 2 cut(s) 798, 1385
Hin1I GRCGYC 1 cut(s) 796
Hin6I GCGC 2 cut(s) 796, 1383
HinP1I GCGC 2 cut(s) 796, 1383
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 1753
HinfI GANTC 7 cut(s) 89, 216, 782, 970, 1760, 1862, 1916
HpaI GTTAAC 1 cut(s) 403
HpaII CCGG 3 cut(s) 189, 205, 856
HphI GGTGA 5 cut(s) 550, 1769, 1847, 1982, 2016
Hpy166II GTNNAC 4 cut(s) 372, 403, 935, 1233
Hpy188I TCNGA 9 cut(s) 80, 231, 636, 781, 975, 1921, 1942, 1983, 2065
Hpy188III TCNNGA 6 cut(s) 722, 1070, 1213, 1617, 1866, 1913
Hpy8I GTNNAC 4 cut(s) 372, 403, 935, 1233
HpyAV CCTTC 9 cut(s) 80, 121, 823, 830, 1172, 1314, 1776, 1801, 2151
HpyCH4III ACNGT 6 cut(s) 253, 777, 815, 876, 932, 1092
HpyCH4IV ACGT 1 cut(s) 1257
HpyF10VI GCNNNNNNNGC 3 cut(s) 1082, 1358, 1658
HpyF3I CTNAG 3 cut(s) 228, 1284, 1693
HpySE526I ACGT 1 cut(s) 1257
Hsp92I GRCGYC 1 cut(s) 796
HspAI GCGC 2 cut(s) 796, 1383
KasI GGCGCC 1 cut(s) 795
Ksp22I TGATCA 2 cut(s) 496, 1774
KspAI GTTAAC 1 cut(s) 403
Kzo9I GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
Lsp1109I GCAGC 1 cut(s) 1685
LweI GCATC 3 cut(s) 650, 1085, 1094
MaeI CTAG 9 cut(s) 198, 234, 329, 446, 705, 951, 1293, 1358, 1913
MaeII ACGT 1 cut(s) 1257
MaeIII GTNAC 6 cut(s) 582, 712, 860, 1569, 1970, 2022
MalI GATC 7 cut(s) 498, 1269, 1776, 1877, 1890, 2084, 2139
MboI GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
MboII GAAGA 8 cut(s) 58, 67, 172, 845, 1643, 1727, 1844, 1901
MfeI CAATTG 2 cut(s) 122, 600
MflI RGATCY 2 cut(s) 1888, 2137
MhlI GDGCHC 2 cut(s) 359, 1354
MlsI TGGCCA 1 cut(s) 1536
MluNI TGGCCA 1 cut(s) 1536
Mly113I GGCGCC 1 cut(s) 796
MlyI GAGTC 2 cut(s) 1754, 1856
MmeI TCCRAC 3 cut(s) 193, 1965, 1984
MnlI CCTC 8 cut(s) 304, 718, 1401, 1423, 1438, 1866, 2089, 2128
Mox20I TGGCCA 1 cut(s) 1536
MroXI GAANNNNTTC 1 cut(s) 1144
MscI TGGCCA 1 cut(s) 1536
MseI TTAA 7 cut(s) 402, 515, 569, 617, 1047, 1136, 1280
MslI CAYNNNNRTG 2 cut(s) 1493, 1524
Msp20I TGGCCA 1 cut(s) 1536
MspCI CTTAAG 2 cut(s) 616, 1135
MspI CCGG 3 cut(s) 189, 205, 856
MspR9I CCNGG 8 cut(s) 94, 189, 458, 522, 693, 856, 939, 1733
MunI CAATTG 2 cut(s) 122, 600
Mva1269I GAATGC 1 cut(s) 1294
MvaI CCWGG 6 cut(s) 94, 458, 522, 693, 939, 1733
MvnI CGCG 1 cut(s) 385
MwoI GCNNNNNNNGC 3 cut(s) 1082, 1358, 1658
NarI GGCGCC 1 cut(s) 796
NciI CCSGG 2 cut(s) 189, 856
NcoI CCATGG 1 cut(s) 741
NdeI CATATG 1 cut(s) 2011
NdeII GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
NheI GCTAGC 1 cut(s) 1357
NlaIV GGNNCC 4 cut(s) 113, 797, 883, 2139
NmuCI GTSAC 5 cut(s) 582, 712, 860, 1970, 2022
NspI RCATGY 3 cut(s) 1744, 2023, 2165
NspV TTCGAA 1 cut(s) 168
PciI ACATGT 2 cut(s) 2019, 2161
PcsI WCGNNNNNNNCGW 1 cut(s) 1254
PctI GAATGC 1 cut(s) 1294
PdmI GAANNNNTTC 1 cut(s) 1144
PfeI GAWTC 5 cut(s) 89, 216, 782, 970, 1916
PflMI CCANNNNNTGG 1 cut(s) 108
PfoI TCCNGGA 2 cut(s) 456, 1731
PinAI ACCGGT 1 cut(s) 204
PkrI GCNGC 1 cut(s) 1700
PleI GAGTC 2 cut(s) 1754, 1856
PluTI GGCGCC 1 cut(s) 799
PpsI GAGTC 2 cut(s) 1754, 1856
PscI ACATGT 2 cut(s) 2019, 2161
PsiI TTATAA 2 cut(s) 345, 1560
Psp6I CCWGG 6 cut(s) 92, 456, 520, 691, 937, 1731
PspEI GGTNACC 1 cut(s) 1970
PspGI CCWGG 6 cut(s) 92, 456, 520, 691, 937, 1731
PspN4I GGNNCC 4 cut(s) 113, 797, 883, 2139
PspPI GGNCC 2 cut(s) 695, 1788
PsuI RGATCY 2 cut(s) 1888, 2137
RsaI GTAC 3 cut(s) 240, 662, 1368
RsaNI GTAC 3 cut(s) 239, 661, 1367
RseI CAYNNNNRTG 2 cut(s) 1493, 1524
SaqAI TTAA 7 cut(s) 402, 515, 569, 617, 1047, 1136, 1280
SatI GCNGC 1 cut(s) 1699
Sau3AI GATC 7 cut(s) 496, 1267, 1774, 1875, 1888, 2082, 2137
Sau96I GGNCC 2 cut(s) 695, 1788
SchI GAGTC 2 cut(s) 1754, 1856
ScrFI CCNGG 8 cut(s) 94, 189, 458, 522, 693, 856, 939, 1733
SduI GDGCHC 2 cut(s) 359, 1354
SfaNI GCATC 3 cut(s) 650, 1085, 1094
SfoI GGCGCC 1 cut(s) 797
SfuI TTCGAA 1 cut(s) 168
SinI GGWCC 1 cut(s) 1788
SmiMI CAYNNNNRTG 2 cut(s) 1493, 1524
SmlI CTYRAG 3 cut(s) 616, 1135, 1864
SmoI CTYRAG 3 cut(s) 616, 1135, 1864
SpeI ACTAGT 2 cut(s) 328, 704
SsiI CCGC 7 cut(s) 385, 710, 1026, 1155, 1433, 1675, 1786
SspDI GGCGCC 1 cut(s) 795
SspI AATATT 1 cut(s) 1962
SspMI CTAG 9 cut(s) 198, 234, 329, 446, 705, 951, 1293, 1358, 1913
StyD4I CCNGG 8 cut(s) 92, 187, 456, 520, 691, 854, 937, 1731
StyI CCWWGG 2 cut(s) 741, 1537
TaaI ACNGT 6 cut(s) 253, 777, 815, 876, 932, 1092
TaiI ACGT 1 cut(s) 1260
TaqI TCGA 3 cut(s) 168, 1079, 1275
TatI WGTACW 1 cut(s) 660
TfiI GAWTC 5 cut(s) 89, 216, 782, 970, 1916
Tru1I TTAA 7 cut(s) 402, 515, 569, 617, 1047, 1136, 1280
Tru9I TTAA 7 cut(s) 402, 515, 569, 617, 1047, 1136, 1280
TscAI CASTG 4 cut(s) 258, 780, 881, 2043
TseFI GTSAC 5 cut(s) 582, 712, 860, 1970, 2022
TseI GCWGC 1 cut(s) 1698
Tsp45I GTSAC 5 cut(s) 582, 712, 860, 1970, 2022
TspDTI ATGAA 8 cut(s) 486, 542, 1191, 1452, 1542, 1659, 1940, 2162
TspGWI ACGGA 2 cut(s) 1433, 1735
TspRI CASTG 4 cut(s) 258, 780, 881, 2043
Van91I CCANNNNNTGG 1 cut(s) 108
Vha464I CTTAAG 2 cut(s) 616, 1135
VpaK11BI GGWCC 1 cut(s) 1788
XapI RAATTY 7 cut(s) 193, 650, 836, 1421, 1634, 1842, 1935
XbaI TCTAGA 1 cut(s) 1912
XceI RCATGY 3 cut(s) 1744, 2023, 2165
XcmI CCANNNNNNNNNTGG 1 cut(s) 1544
XmiI GTMKAC 1 cut(s) 371
XmnI GAANNNNTTC 1 cut(s) 1144
XspI CTAG 9 cut(s) 198, 234, 329, 446, 705, 951, 1293, 1358, 1913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.