Rorug05G0184600

Bromodomain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000322
Physical Location & Seq
Reverse (-)
17867634 .. 17873677
6044 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0184600.1

Sequence Viewer

Length: 1905 bp
ATGTCAGTGCTTATAGTGACGAGTTTGGGGGATATAGTTGTGGATTTGTACACAGACAGGTGTCCTCTTACTGCCAAGAACTTCTTGAAGCTCTGCAAGATAAAGTATTACAATGGGTGTCTCTTTCACACGGTCCAGAAGGATTTTACTGCACAGACTGGTGACCCAACTGGAACGGGTTCTGGTGGTGATTCAATTTACAAATATTTGTATGGTGATCAGGCTCGCTTTTTTGGTGATGAGATTCATCTTGATTTGAAGCATGCTAAAACAGGCACAATTGCCATGGCCAGTGCTGGAGAGAATCTCAATGCCTCTCAGTTCTATTTTACATTGCGTGATGATCTAGACTATCTCGATGGGAAGCATACAGTTTTTGGGGAGATAGCAGAGGGGTTGGAGACATTGACAAGGATCAATGAGGCTTATGTGGACGAGAGCAACAGACCCTATAAAAATATTAGAATCAAGCATACCTACATATTGGATGATCCTTTTGATGATCCTTCACAACTATCTGAGTTAATTCCTGGAGCCTCGCCGGAAGGCAAACCAAAGGATGAGGTTGATGATAATGTGCGTCTTGAAGATGATTGGGTGCCTATGGATGAAGAATTGGCTCCTGGAGAGCTTGAGGAGCGTCTTCGTGCCAAAGATGCACATTCCAGTGCTGTTGTACTTGAGAGTATAGGGGATATTCCTGATGTTGAGATAAAGCCGCCTGACAATGTGCTTTTTGTTTGTAAGCTGAATCCAGTCACTGAAGATGAGGACTTGTTCACAATTTTCTCACGCTTTGGAACTGTGCAAGCGGCTGACATAATACGTGATTATAAGACTGGAGACAGTTTGTGTTATGCGTTCATAGAATTTGAAACGAAAGAGGCCTGTGAACAAGCATATTTCAAGATGGATAATGCTTTGATTGATGACCGAAGAATTCATGTAGATTTTAGTCAGAGTGTTGCAAGGTTGTGGTCCCAATACAGGCGCAAAGAAGCGGGCAAAGGCAAAGGCTGCTTCAAATGTGGTGCACTTGATCACATTGCCAAGGAGTGCACTGGTGATAATGCCAGTAAACAGCAACCGCAGAAGTACGTATTGAAGAATGATAATGCACAGCGTGGTGGAGGCAACAACTCTAGTTATGAGATGGTATTTGATGGAGATACTCCAGAAAGTCCAAGACAAGAAAAGAGACATCAAGTCCATGATCCAATTAACCGAGTTGAGAACCAAAAGATGAATAGGCAGAGTTCTGAGGACCAAAGGCGGGATCAAGAAAATAAGCACTCAAGTGATAGAGACCGACACAGTGTCAGAGGTAGAGGATACAAAGAGGAATCAAGTCGAGACAGTAGATCAAGTCGATCTGGTGGAAGAAGTCATCGAGATTTTGAAGGGGAAAGGGATGCTGAAAAGCCTAAGGTGAGACAAAGAGACAAAGATGATAAGCTGGATCAACGGGACTATGCAGAGAGAAGACGTGATGGAGATTACAGAAAGAGGAGTGCAGATAGTGATAGAGAGAAGCATAAAGAGAGACGAAGAGACAGAGATGATAATATTGACCAGCAGGAGAGTGGAAAGAGGTATGCAGATGACGGTATGTATGCAGCACAGAGGGGAGATGAAGATTACAGAAAAAGGACTGCAGATGGTGATAGATCCACAGAAAGGAGTAGGGATAGAGAATACAGAAAGAGAAGTGTAGCTAATGGTAGCCCTTCAGAAAAGAGAGACGATGAATTTTATAGAAAGATACGTGCAGAGCACGATAAGCATGCAGAAATGAGGGATGATAGAAACTCTAGGAAGAAATCTGTTGATGACAGACGAGACAAGAGAGATGAACCAGTTCATAAGAGAAGCGCAGGGAGGGAAGATAGAGAACATAGAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0042393 GO:0070577 GO:0140030 GO:0140033
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain

Protein Analysis

634

Amino Acids

73.35

Weight (kDa)

5.88

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 4 - 159 3.1e-44 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RRM_1 PF00076 245 - 315 2.2e-15 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000322)

Species Orthologous Gene IDs
rosa_rugosa Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 834
AccB1I GGYRCC 1 cut(s) 598
AciI CCGC 5 cut(s) 719, 812, 1001, 1088, 1273
AclWI GGATC 7 cut(s) 422, 485, 497, 1208, 1284, 1467, 1662
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 3 cut(s) 869, 939, 1748
AcuI CTGAAG 2 cut(s) 783, 1713
AdeI CACNNNGTG 1 cut(s) 1124
AfaI GTAC 3 cut(s) 50, 678, 1097
AfiI CCNNNNNNNGG 3 cut(s) 987, 1273, 1677
AgsI TTSAA 9 cut(s) 88, 195, 259, 587, 875, 907, 1024, 1105, 1400
AhdI GACNNNNNGTC 2 cut(s) 1205, 1316
AjiI CACGTC 1 cut(s) 1487
AjnI CCWGG 2 cut(s) 529, 622
AleI CACNNNNGTG 1 cut(s) 1296
AluBI AGCT 5 cut(s) 91, 631, 748, 1456, 1715
AluI AGCT 5 cut(s) 91, 631, 748, 1456, 1715
Alw21I GWGCWC 3 cut(s) 1036, 1061, 1776
Alw44I GTGCAC 2 cut(s) 1032, 1057
AlwI GGATC 7 cut(s) 422, 485, 497, 1208, 1284, 1467, 1662
AlwNI CAGNNNCTG 1 cut(s) 761
AoxI GGCC 2 cut(s) 288, 885
ApaLI GTGCAC 2 cut(s) 1032, 1057
ApeKI GCWGC 2 cut(s) 1017, 1616
ApoI RAATTY 3 cut(s) 869, 939, 1748
Asp700I GAANNNNTTC 2 cut(s) 178, 1857
AspLEI GCGC 2 cut(s) 993, 1874
AspS9I GGNCC 3 cut(s) 133, 978, 1264
AsuHPI GGTGA 7 cut(s) 173, 200, 227, 248, 1076, 1441, 1673
AvaII GGWCC 3 cut(s) 133, 978, 1264
AxyI CCTNAGG 1 cut(s) 1425
BaeGI GKGCMC 2 cut(s) 1036, 1061
BalI TGGCCA 1 cut(s) 290
BanI GGYRCC 1 cut(s) 598
BbsI GAAGAC 2 cut(s) 635, 1489
Bbv12I GWGCWC 3 cut(s) 1036, 1061, 1776
BbvI GCAGC 2 cut(s) 1004, 1628
BccI CCATC 6 cut(s) 353, 904, 1147, 1157, 1484, 1652
BcgI CGANNNNNNTGC 2 cut(s) 1766, 1800
BciT130I CCWGG 2 cut(s) 531, 624
BciVI GTATCC 1 cut(s) 1325
BclI TGATCA 2 cut(s) 217, 1039
BfaI CTAG 3 cut(s) 347, 1143, 1812
BfmI CTRYAG 1 cut(s) 1653
BfuI GTATCC 1 cut(s) 1325
BisI GCNGC 4 cut(s) 719, 813, 1018, 1617
BlsI GCNGC 4 cut(s) 720, 814, 1019, 1618
Bme1390I CCNGG 2 cut(s) 531, 624
Bme18I GGWCC 3 cut(s) 133, 978, 1264
BmeRI GACNNNNNGTC 2 cut(s) 1205, 1316
BmgBI CACGTC 1 cut(s) 1487
BmgT120I GGNCC 3 cut(s) 133, 978, 1264
BmiI GGNNCC 4 cut(s) 535, 600, 621, 980
BmrFI CCNGG 2 cut(s) 531, 624
BmsI GCATC 2 cut(s) 646, 1402
BoxI GACNNNNGTC 1 cut(s) 60
BpiI GAAGAC 2 cut(s) 635, 1489
BplI GAGNNNNNCTC 2 cut(s) 291, 323
BpmI CTGGAG 5 cut(s) 318, 552, 645, 861, 1158
BpuEI CTTGAG 3 cut(s) 653, 701, 1279
BsaAI YACGTR 3 cut(s) 827, 1099, 1766
BsaI GGTCTC 1 cut(s) 1299
BsaJI CCNNGG 2 cut(s) 285, 1050
Bsc4I CCNNNNNNNGG 3 cut(s) 987, 1273, 1677
Bse1I ACTGG 9 cut(s) 163, 175, 291, 666, 755, 844, 1066, 1074, 1856
Bse21I CCTNAGG 1 cut(s) 1425
Bse3DI GCAATG 2 cut(s) 332, 1044
BseBI CCWGG 2 cut(s) 531, 624
BseDI CCNNGG 2 cut(s) 285, 1050
BseGI GGATG 5 cut(s) 493, 565, 613, 1417, 1804
BseLI CCNNNNNNNGG 3 cut(s) 987, 1273, 1677
BseMI GCAATG 2 cut(s) 332, 1044
BseMII CTCAG 3 cut(s) 332, 510, 1251
BseNI ACTGG 9 cut(s) 163, 175, 291, 666, 755, 844, 1066, 1074, 1856
BseRI GAGGAG 2 cut(s) 650, 1522
BseSI GKGCMC 2 cut(s) 1036, 1061
BseXI GCAGC 2 cut(s) 1004, 1628
BsgI GTGCAG 3 cut(s) 135, 1533, 1788
BshFI GGCC 2 cut(s) 290, 887
BshNI GGYRCC 1 cut(s) 598
BsiHKAI GWGCWC 3 cut(s) 1036, 1061, 1776
BsiSI CCGG 1 cut(s) 542
BslFI GGGAC 2 cut(s) 964, 1481
BslI CCNNNNNNNGG 3 cut(s) 987, 1273, 1677
BsmBI CGTCTC 2 cut(s) 1537, 1734
BsmFI GGGAC 2 cut(s) 964, 1481
BsnI GGCC 2 cut(s) 290, 887
Bso31I GGTCTC 1 cut(s) 1299
Bsp1286I GDGCHC 3 cut(s) 1036, 1061, 1776
Bsp1407I TGTACA 1 cut(s) 48
Bsp19I CCATGG 1 cut(s) 285
BspACI CCGC 5 cut(s) 719, 812, 1001, 1088, 1273
BspANI GGCC 2 cut(s) 290, 887
BspCNI CTCAG 3 cut(s) 331, 511, 1252
BspLI GGNNCC 4 cut(s) 535, 600, 621, 980
BspMAI CTGCAG 1 cut(s) 1657
BspPI GGATC 7 cut(s) 422, 485, 497, 1208, 1284, 1467, 1662
BspT107I GGYRCC 1 cut(s) 598
BspTNI GGTCTC 1 cut(s) 1299
BsrDI GCAATG 2 cut(s) 332, 1044
BsrGI TGTACA 1 cut(s) 48
BsrI ACTGG 9 cut(s) 163, 175, 291, 666, 755, 844, 1066, 1074, 1856
BssECI CCNNGG 2 cut(s) 285, 1050
BssT1I CCWWGG 2 cut(s) 285, 1050
Bst2UI CCWGG 2 cut(s) 531, 624
Bst4CI ACNGT 7 cut(s) 133, 373, 805, 848, 1316, 1358, 1607
Bst6I CTCTTC 1 cut(s) 1543
BstAPI GCANNNNNTGC 1 cut(s) 1017
BstAUI TGTACA 1 cut(s) 48
BstBAI YACGTR 3 cut(s) 827, 1099, 1766
BstC8I GCNNGC 5 cut(s) 226, 264, 810, 1003, 1785
BstDEI CTNAG 4 cut(s) 318, 519, 1260, 1425
BstDSI CCRYGG 1 cut(s) 285
BstEII GGTNACC 1 cut(s) 161
BstF5I GGATG 5 cut(s) 493, 565, 613, 1417, 1804
BstHHI GCGC 2 cut(s) 993, 1874
BstMWI GCNNNNNNNGC 4 cut(s) 637, 656, 1017, 1780
BstNI CCWGG 2 cut(s) 531, 624
BstNSI RCATGY 2 cut(s) 266, 1787
BstPAI GACNNNNGTC 1 cut(s) 60
BstPI GGTNACC 1 cut(s) 161
BstSCI CCNGG 2 cut(s) 529, 622
BstSFI CTRYAG 1 cut(s) 1653
BstSLI GKGCMC 2 cut(s) 1036, 1061
BstSNI TACGTA 1 cut(s) 1099
BstV1I GCAGC 2 cut(s) 1004, 1628
BstV2I GAAGAC 2 cut(s) 635, 1489
BstX2I RGATCY 1 cut(s) 1667
BstYI RGATCY 1 cut(s) 1667
Bsu36I CCTNAGG 1 cut(s) 1425
BsuI GTATCC 1 cut(s) 1325
BsuRI GGCC 2 cut(s) 290, 887
BtgI CCRYGG 1 cut(s) 285
BtrI CACGTC 1 cut(s) 1487
BtsCI GGATG 5 cut(s) 493, 565, 613, 1417, 1804
BtsIMutI CAGTG 6 cut(s) 12, 298, 673, 759, 1059, 1321
Cac8I GCNNGC 5 cut(s) 226, 264, 810, 1003, 1785
CaiI CAGNNNCTG 1 cut(s) 761
CfoI GCGC 2 cut(s) 993, 1874
Cfr13I GGNCC 3 cut(s) 133, 978, 1264
CseI GACGC 2 cut(s) 569, 629
Csp6I GTAC 3 cut(s) 49, 677, 1096
CviAII CATG 5 cut(s) 263, 286, 944, 1211, 1784
CviQI GTAC 3 cut(s) 49, 677, 1096
DdeI CTNAG 4 cut(s) 318, 519, 1260, 1425
DraIII CACNNNGTG 1 cut(s) 1124
DriI GACNNNNNGTC 2 cut(s) 1205, 1316
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 1 cut(s) 1543
Eam1105I GACNNNNNGTC 2 cut(s) 1205, 1316
EarI CTCTTC 1 cut(s) 1543
Eco105I TACGTA 1 cut(s) 1099
Eco130I CCWWGG 2 cut(s) 285, 1050
Eco147I AGGCCT 1 cut(s) 887
Eco31I GGTCTC 1 cut(s) 1299
Eco47I GGWCC 3 cut(s) 133, 978, 1264
Eco57I CTGAAG 2 cut(s) 783, 1713
Eco81I CCTNAGG 1 cut(s) 1425
Eco91I GGTNACC 1 cut(s) 161
EcoO65I GGTNACC 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 939
EcoRII CCWGG 2 cut(s) 529, 622
EcoT14I CCWWGG 2 cut(s) 285, 1050
ErhI CCWWGG 2 cut(s) 285, 1050
Esp3I CGTCTC 2 cut(s) 1537, 1734
FaeI CATG 5 cut(s) 266, 289, 947, 1214, 1787
FalI AAGNNNNNCTT 2 cut(s) 68, 100
FaqI GGGAC 2 cut(s) 964, 1481
FatI CATG 5 cut(s) 262, 285, 943, 1210, 1783
FauI CCCGC 2 cut(s) 994, 1266
FbaI TGATCA 2 cut(s) 217, 1039
Fnu4HI GCNGC 4 cut(s) 719, 813, 1018, 1617
FokI GGATG 5 cut(s) 500, 572, 620, 1424, 1811
Fsp4HI GCNGC 4 cut(s) 719, 813, 1018, 1617
FspBI CTAG 3 cut(s) 347, 1143, 1812
GlaI GCGC 2 cut(s) 992, 1873
GluI GCNGC 4 cut(s) 719, 813, 1018, 1617
GsuI CTGGAG 5 cut(s) 318, 552, 645, 861, 1158
HaeIII GGCC 2 cut(s) 290, 887
HapII CCGG 1 cut(s) 542
HgaI GACGC 2 cut(s) 569, 629
HhaI GCGC 2 cut(s) 993, 1874
Hin1II CATG 5 cut(s) 266, 289, 947, 1214, 1787
Hin6I GCGC 2 cut(s) 991, 1872
HinP1I GCGC 2 cut(s) 991, 1872
HinfI GANTC 6 cut(s) 191, 244, 304, 465, 751, 1343
HpaII CCGG 1 cut(s) 542
HphI GGTGA 7 cut(s) 173, 200, 227, 248, 1076, 1441, 1673
Hpy166II GTNNAC 7 cut(s) 51, 433, 780, 893, 1034, 1059, 1079
Hpy188I TCNGA 5 cut(s) 520, 960, 1261, 1322, 1732
Hpy8I GTNNAC 7 cut(s) 51, 433, 780, 893, 1034, 1059, 1079
HpyAV CCTTC 6 cut(s) 133, 516, 539, 1394, 1737, 1893
HpyCH4III ACNGT 7 cut(s) 133, 373, 805, 848, 1316, 1358, 1607
HpyCH4IV ACGT 4 cut(s) 826, 1098, 1486, 1765
HpyF10VI GCNNNNNNNGC 4 cut(s) 637, 656, 1017, 1780
HpyF3I CTNAG 4 cut(s) 318, 519, 1260, 1425
HpySE526I ACGT 4 cut(s) 826, 1098, 1486, 1765
Hsp92II CATG 5 cut(s) 266, 289, 947, 1214, 1787
HspAI GCGC 2 cut(s) 991, 1872
Ksp22I TGATCA 2 cut(s) 217, 1039
LmnI GCTCC 3 cut(s) 533, 625, 637
Lsp1109I GCAGC 2 cut(s) 1004, 1628
LweI GCATC 2 cut(s) 646, 1402
MaeI CTAG 3 cut(s) 347, 1143, 1812
MaeII ACGT 4 cut(s) 826, 1098, 1486, 1765
MaeIII GTNAC 3 cut(s) 16, 161, 757
MfeI CAATTG 1 cut(s) 279
MflI RGATCY 1 cut(s) 1667
MhlI GDGCHC 3 cut(s) 1036, 1061, 1776
MlsI TGGCCA 1 cut(s) 290
MluCI AATT 9 cut(s) 195, 279, 525, 614, 783, 869, 939, 1218, 1748
MluNI TGGCCA 1 cut(s) 290
MmeI TCCRAC 1 cut(s) 378
Mox20I TGGCCA 1 cut(s) 290
MroXI GAANNNNTTC 2 cut(s) 178, 1857
MscI TGGCCA 1 cut(s) 290
MseI TTAA 2 cut(s) 524, 1221
MslI CAYNNNNRTG 2 cut(s) 666, 1296
Msp20I TGGCCA 1 cut(s) 290
MspI CCGG 1 cut(s) 542
MspR9I CCNGG 2 cut(s) 531, 624
MunI CAATTG 1 cut(s) 279
MvaI CCWGG 2 cut(s) 531, 624
MwoI GCNNNNNNNGC 4 cut(s) 637, 656, 1017, 1780
NcoI CCATGG 1 cut(s) 285
NlaIII CATG 5 cut(s) 266, 289, 947, 1214, 1787
NlaIV GGNNCC 4 cut(s) 535, 600, 621, 980
NmuCI GTSAC 3 cut(s) 16, 161, 757
NspI RCATGY 2 cut(s) 266, 1787
OliI CACNNNNGTG 1 cut(s) 1296
PaeI GCATGC 2 cut(s) 266, 1787
PceI AGGCCT 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 178, 1857
PfeI GAWTC 6 cut(s) 191, 244, 304, 465, 751, 1343
PfoI TCCNGGA 2 cut(s) 529, 622
PkrI GCNGC 4 cut(s) 720, 814, 1019, 1618
Ppu21I YACGTR 3 cut(s) 827, 1099, 1766
PshAI GACNNNNGTC 1 cut(s) 60
PsiI TTATAA 1 cut(s) 834
Psp6I CCWGG 2 cut(s) 529, 622
PspEI GGTNACC 1 cut(s) 161
PspGI CCWGG 2 cut(s) 529, 622
PspN4I GGNNCC 4 cut(s) 535, 600, 621, 980
PspPI GGNCC 3 cut(s) 133, 978, 1264
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 1 cut(s) 1667
RsaI GTAC 3 cut(s) 50, 678, 1097
RsaNI GTAC 3 cut(s) 49, 677, 1096
RseI CAYNNNNRTG 2 cut(s) 666, 1296
SaqAI TTAA 2 cut(s) 524, 1221
SatI GCNGC 4 cut(s) 719, 813, 1018, 1617
Sau96I GGNCC 3 cut(s) 133, 978, 1264
ScrFI CCNGG 2 cut(s) 531, 624
SduI GDGCHC 3 cut(s) 1036, 1061, 1776
SfaNI GCATC 2 cut(s) 646, 1402
SfcI CTRYAG 1 cut(s) 1653
SinI GGWCC 3 cut(s) 133, 978, 1264
SmiMI CAYNNNNRTG 2 cut(s) 666, 1296
SmlI CTYRAG 3 cut(s) 632, 680, 1294
SmoI CTYRAG 3 cut(s) 632, 680, 1294
SnaBI TACGTA 1 cut(s) 1099
SphI GCATGC 2 cut(s) 266, 1787
Sse9I AATT 9 cut(s) 195, 279, 525, 614, 783, 869, 939, 1218, 1748
SseBI AGGCCT 1 cut(s) 887
SsiI CCGC 5 cut(s) 719, 812, 1001, 1088, 1273
SspI AATATT 3 cut(s) 206, 460, 1567
SspMI CTAG 3 cut(s) 347, 1143, 1812
StuI AGGCCT 1 cut(s) 887
StyD4I CCNGG 2 cut(s) 529, 622
StyI CCWWGG 2 cut(s) 285, 1050
TaaI ACNGT 7 cut(s) 133, 373, 805, 848, 1316, 1358, 1607
TaiI ACGT 4 cut(s) 829, 1101, 1489, 1768
TaqI TCGA 4 cut(s) 357, 1351, 1369, 1390
TaqII GACCGA 2 cut(s) 948, 1323
TasI AATT 9 cut(s) 195, 279, 525, 614, 783, 869, 939, 1218, 1748
TatI WGTACW 2 cut(s) 48, 676
TauI GCSGC 2 cut(s) 721, 815
TfiI GAWTC 6 cut(s) 191, 244, 304, 465, 751, 1343
Tru1I TTAA 2 cut(s) 524, 1221
Tru9I TTAA 2 cut(s) 524, 1221
TscAI CASTG 6 cut(s) 12, 298, 673, 766, 1066, 1321
TseFI GTSAC 3 cut(s) 16, 161, 757
TseI GCWGC 2 cut(s) 1017, 1616
Tsp45I GTSAC 3 cut(s) 16, 161, 757
TspDTI ATGAA 9 cut(s) 236, 624, 853, 932, 1259, 1647, 1761, 1850, 1866
TspRI CASTG 6 cut(s) 12, 298, 673, 766, 1066, 1321
VneI GTGCAC 2 cut(s) 1032, 1057
VpaK11BI GGWCC 3 cut(s) 133, 978, 1264
XapI RAATTY 3 cut(s) 869, 939, 1748
XbaI TCTAGA 1 cut(s) 346
XceI RCATGY 2 cut(s) 266, 1787
XcmI CCANNNNNNNNNTGG 1 cut(s) 1580
XmnI GAANNNNTTC 2 cut(s) 178, 1857
XspI CTAG 3 cut(s) 347, 1143, 1812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.