Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000322

Physical Location & Seq

Genomic Coordinates Forward (+)

7227357 .. 7228784

Gene Structure 1428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0046500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1257 bp

ATGGAGGTGATCCTCGACGGCAGCCTTCCCTCGGAAATTCTTGTCGAGATACTGTCTAGGCTTCCTTTCCAATCACTACGACAATTTCGTTTTGTATGCAAGGTATGCAAGTCATGGCGTACTTTAATATCCAGTTCATATTTTCTTATCAAACACACCAGCGTCACTGTTGGAGATAGAAGCAGGTTAAAGTTCCTATATGGATTAGATCCACCCCGATTCATACACTATGAAGCATTATTGAACAAGGATGGTCCTGTTGCACCTAGGAAACTTGTTGCCCCTATGTGCGTTAAAGAAGATGATAATCGATTTCATTACCACCTTGTGGGTTCCTGCAATGGCTTGATATGTCTATATTGTGAAGATACTCACGAAGAGACCACCGAGGAAGAAGATACCACCGACGAAGTTGTACAACTTCATCTGTGCTCCGTCGACTTGGTCGTATGGAACCCTTGCACTAGAGATGCATGCAGGTTATCAGGACCGACTCTTTTAGGAAGCGTATTTGTAGGAGTTTTTTCGGGATTTGGTTATGATTCCACCACCCAAGATTACAAGGTCATAGTAGAGTTCACAGATTCTGATCCTGATATAAGTGCAAGTGCAAGTCCAACTCGAATTGCCATCTTCTCTCTGAAAACGAGTTCATGGAGACTCGTTGAATGCCAAGAGCATTACGAATTGTTTGGGAACGGGTGCTTAGTAAACGGAACTCTACATTGGTTAGAGACTAAAAATCGTGAGAAAGATTGTCCTTTAACATCGCAAAACATCTGTTCAAGAATCATCTCTTTTGATCTAGCCAAAGAGACATTTCAGGAAGTCGCTACATTAACCAATCTTTTCGACAAAGAATGTGATCATGAGCTCTCTGTGGGAATTGGAACGACAATGGGAAATTGTCTCTTTGTGTATGTTCACGATCGGCACAATCATAATTACAATATGGGTTTTGCCTATACAATATGGGTGATGAAGGAATATGGGATCGAGAAATCTTGGACTAAACTTGTACAGATTCCTTCAGATATGTTTCATGGATATGGGGGTTTTACATGTTATCCGAAGCCTAAATGGATGTTAGAGAATGATGAAGTTTTGATAATCTTGGAAGAGGATGATATGTATGATGAGGTGGCATTATATAATCCCAAGGAAAATACATTCAGGACTGTTCTTCAGGATTATTGCTTTTGGTGGGGTTCGACATTTTACACTGACACTTTAGTTTCACCTAAAAATATCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

418

Amino Acids

48.08

Weight (kDa)

5.01

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	8 - 50	1.3e-06	F-box domain
F-box-like	PF12937	8 - 46	2e-07	F-box-like
FBA_3	PF08268	105 - 394	3e-16	F-box associated beta propeller domain
FBA_1	PF07734	143 - 384	9.1e-21	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000322)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	174, 468
AccB7I	CCANNNNNTGG	1 cut(s)	328
AccI	GTMKAC	1 cut(s)	438
AclWI	GGATC	4 cut(s)	4, 203, 584, 1001
AcsI	RAATTY	1 cut(s)	36
AcuI	CTGAAG	2 cut(s)	1014, 1169
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	3 cut(s)	121, 417, 1020
AfiI	CCNNNNNNNGG	2 cut(s)	31, 328
AflIII	ACRYGT	1 cut(s)	1061
AgsI	TTSAA	3 cut(s)	244, 668, 786
AjuI	GAANNNNNNNTTGG	2 cut(s)	709, 741
AluBI	AGCT	1 cut(s)	874
AluI	AGCT	1 cut(s)	874
Alw21I	GWGCWC	2 cut(s)	434, 876
Alw26I	GTCTC	5 cut(s)	374, 652, 728, 809, 914
AlwI	GGATC	4 cut(s)	4, 203, 584, 1001
AlwNI	CAGNNNCTG	1 cut(s)	587
ApeKI	GCWGC	1 cut(s)	21
ApoI	RAATTY	1 cut(s)	36
AspA2I	CCTAGG	1 cut(s)	266
AspS9I	GGNCC	2 cut(s)	254, 488
AsuHPI	GGTGA	3 cut(s)	19, 988, 1230
AvaII	GGWCC	2 cut(s)	254, 488
AvrII	CCTAGG	1 cut(s)	266
BanII	GRGCYC	1 cut(s)	876
Bbv12I	GWGCWC	2 cut(s)	434, 876
BbvI	GCAGC	1 cut(s)	33
BccI	CCATC	2 cut(s)	245, 638
BceAI	ACGGC	1 cut(s)	34
BclI	TGATCA	1 cut(s)	865
BcoDI	GTCTC	5 cut(s)	374, 652, 728, 809, 914
BfaI	CTAG	4 cut(s)	57, 267, 465, 806
BfuAI	ACCTGC	2 cut(s)	174, 468
BisI	GCNGC	1 cut(s)	22
BlnI	CCTAGG	1 cut(s)	266
BlsI	GCNGC	1 cut(s)	23
Bme18I	GGWCC	2 cut(s)	254, 488
BmgT120I	GGNCC	2 cut(s)	254, 488
BmiI	GGNNCC	2 cut(s)	334, 455
BmsI	GCATC	1 cut(s)	460
Bsa29I	ATCGAT	1 cut(s)	310
BsaBI	GATNNNNATC	2 cut(s)	306, 588
BsaI	GGTCTC	1 cut(s)	374
BsaJI	CCNNGG	4 cut(s)	30, 266, 387, 1158
Bsc4I	CCNNNNNNNGG	2 cut(s)	31, 328
Bse1I	ACTGG	1 cut(s)	132
Bse3DI	GCAATG	1 cut(s)	346
Bse8I	GATNNNNATC	2 cut(s)	306, 588
BseCI	ATCGAT	1 cut(s)	310
BseDI	CCNNGG	4 cut(s)	30, 266, 387, 1158
BseGI	GGATG	3 cut(s)	256, 1089, 1129
BseJI	GATNNNNATC	2 cut(s)	306, 588
BseLI	CCNNNNNNNGG	2 cut(s)	31, 328
BseMI	GCAATG	1 cut(s)	346
BseNI	ACTGG	1 cut(s)	132
BseXI	GCAGC	1 cut(s)	33
Bsh1285I	CGRYCG	1 cut(s)	931
BshVI	ATCGAT	1 cut(s)	310
BsiEI	CGRYCG	1 cut(s)	931
BsiHKAI	GWGCWC	2 cut(s)	434, 876
BslI	CCNNNNNNNGG	2 cut(s)	31, 328
BsmAI	GTCTC	5 cut(s)	374, 652, 728, 809, 914
BsmI	GAATGC	1 cut(s)	674
Bso31I	GGTCTC	1 cut(s)	374
Bsp1286I	GDGCHC	2 cut(s)	434, 876
Bsp1407I	TGTACA	2 cut(s)	415, 1018
Bsp143I	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
BspDI	ATCGAT	1 cut(s)	310
BspHI	TCATGA	1 cut(s)	868
BspLI	GGNNCC	2 cut(s)	334, 455
BspMI	ACCTGC	2 cut(s)	174, 468
BspPI	GGATC	4 cut(s)	4, 203, 584, 1001
BspTNI	GGTCTC	1 cut(s)	374
BsrDI	GCAATG	1 cut(s)	346
BsrGI	TGTACA	2 cut(s)	415, 1018
BsrI	ACTGG	1 cut(s)	132
BssECI	CCNNGG	4 cut(s)	30, 266, 387, 1158
BssMI	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
BssT1I	CCWWGG	2 cut(s)	266, 1158
Bst4CI	ACNGT	3 cut(s)	54, 169, 1180
Bst6I	CTCTTC	2 cut(s)	372, 1113
BstAPI	GCANNNNNTGC	1 cut(s)	105
BstAUI	TGTACA	2 cut(s)	415, 1018
BstC8I	GCNNGC	1 cut(s)	475
BstDEI	CTNAG	1 cut(s)	706
BstF5I	GGATG	3 cut(s)	256, 1089, 1129
BstKTI	GATC	7 cut(s)	12, 211, 592, 805, 868, 931, 996
BstMAI	GTCTC	5 cut(s)	374, 652, 728, 809, 914
BstMBI	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
BstMCI	CGRYCG	1 cut(s)	931
BstMWI	GCNNNNNNNGC	1 cut(s)	105
BstNSI	RCATGY	2 cut(s)	477, 1065
BstV1I	GCAGC	1 cut(s)	33
BstX2I	RGATCY	1 cut(s)	208
BstYI	RGATCY	1 cut(s)	208
Bsu15I	ATCGAT	1 cut(s)	310
BsuTUI	ATCGAT	1 cut(s)	310
BtgZI	GCGATG	1 cut(s)	753
BtsCI	GGATG	3 cut(s)	256, 1089, 1129
BtsIMutI	CAGTG	2 cut(s)	165, 1221
BveI	ACCTGC	2 cut(s)	174, 468
Cac8I	GCNNGC	1 cut(s)	475
CaiI	CAGNNNCTG	1 cut(s)	587
CciI	TCATGA	1 cut(s)	868
Cfr13I	GGNCC	2 cut(s)	254, 488
ClaI	ATCGAT	1 cut(s)	310
CseI	GACGC	1 cut(s)	151
Csp6I	GTAC	3 cut(s)	120, 416, 1019
CviAII	CATG	6 cut(s)	114, 474, 654, 869, 1043, 1062
CviJI	RGCY	6 cut(s)	24, 61, 345, 809, 874, 1075
CviKI_1	RGCY	6 cut(s)	24, 61, 345, 809, 874, 1075
CviQI	GTAC	3 cut(s)	120, 416, 1019
DdeI	CTNAG	1 cut(s)	706
DpnI	GATC	7 cut(s)	11, 210, 591, 804, 867, 930, 995
DpnII	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
DraIII	CACNNNGTG	1 cut(s)	328
Eam1104I	CTCTTC	2 cut(s)	372, 1113
EarI	CTCTTC	2 cut(s)	372, 1113
Ecl136II	GAGCTC	1 cut(s)	874
Eco130I	CCWWGG	2 cut(s)	266, 1158
Eco24I	GRGCYC	1 cut(s)	876
Eco31I	GGTCTC	1 cut(s)	374
Eco47I	GGWCC	2 cut(s)	254, 488
Eco53kI	GAGCTC	1 cut(s)	874
Eco57I	CTGAAG	2 cut(s)	1014, 1169
EcoICRI	GAGCTC	1 cut(s)	874
EcoT14I	CCWWGG	2 cut(s)	266, 1158
EcoT22I	ATGCAT	1 cut(s)	475
EcoT38I	GRGCYC	1 cut(s)	876
ErhI	CCWWGG	2 cut(s)	266, 1158
FaeI	CATG	6 cut(s)	117, 477, 657, 872, 1046, 1065
FatI	CATG	6 cut(s)	113, 473, 653, 868, 1042, 1061
FbaI	TGATCA	1 cut(s)	865
FblI	GTMKAC	1 cut(s)	438
Fnu4HI	GCNGC	1 cut(s)	22
FokI	GGATG	3 cut(s)	263, 1096, 1136
FriOI	GRGCYC	1 cut(s)	876
Fsp4HI	GCNGC	1 cut(s)	22
FspBI	CTAG	4 cut(s)	57, 267, 465, 806
GluI	GCNGC	1 cut(s)	22
HgaI	GACGC	1 cut(s)	151
Hin1II	CATG	6 cut(s)	117, 477, 657, 872, 1046, 1065
HincII	GTYRAC	1 cut(s)	439
HindII	GTYRAC	1 cut(s)	439
HinfI	GANTC	7 cut(s)	219, 493, 542, 584, 660, 789, 1024
HphI	GGTGA	3 cut(s)	19, 988, 1230
Hpy166II	GTNNAC	4 cut(s)	439, 579, 712, 925
Hpy188I	TCNGA	5 cut(s)	34, 589, 642, 1033, 1071
Hpy8I	GTNNAC	4 cut(s)	439, 579, 712, 925
Hpy99I	CGWCG	3 cut(s)	20, 410, 440
HpyAV	CCTTC	3 cut(s)	35, 976, 1038
HpyCH4III	ACNGT	3 cut(s)	54, 169, 1180
HpyCH4V	TGCA	9 cut(s)	99, 108, 263, 339, 462, 473, 477, 605, 611
HpyF10VI	GCNNNNNNNGC	1 cut(s)	105
HpyF3I	CTNAG	1 cut(s)	706
Hsp92II	CATG	6 cut(s)	117, 477, 657, 872, 1046, 1065
Ksp22I	TGATCA	1 cut(s)	865
Kzo9I	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
LmnI	GCTCC	1 cut(s)	437
Lsp1109I	GCAGC	1 cut(s)	33
LweI	GCATC	1 cut(s)	460
MaeI	CTAG	4 cut(s)	57, 267, 465, 806
MaeIII	GTNAC	1 cut(s)	163
MalI	GATC	7 cut(s)	11, 210, 591, 804, 867, 930, 995
MboI	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
MboII	GAAGA	8 cut(s)	311, 377, 389, 404, 407, 625, 1130, 1175
MflI	RGATCY	1 cut(s)	208
MhlI	GDGCHC	2 cut(s)	434, 876
MluCI	AATT	7 cut(s)	36, 83, 624, 686, 885, 904, 943
MlyI	GAGTC	2 cut(s)	487, 654
MmeI	TCCRAC	2 cut(s)	151, 641
MnlI	CCTC	5 cut(s)	23, 40, 382, 1114, 1132
Mph1103I	ATGCAT	1 cut(s)	475
MseI	TTAA	5 cut(s)	125, 188, 294, 764, 839
MslI	CAYNNNNRTG	1 cut(s)	1047
Mva1269I	GAATGC	1 cut(s)	674
MwoI	GCNNNNNNNGC	1 cut(s)	105
NdeII	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
NlaIII	CATG	6 cut(s)	117, 477, 657, 872, 1046, 1065
NlaIV	GGNNCC	2 cut(s)	334, 455
NmuCI	GTSAC	1 cut(s)	163
NsiI	ATGCAT	1 cut(s)	475
NspI	RCATGY	2 cut(s)	477, 1065
PaeI	GCATGC	1 cut(s)	477
PagI	TCATGA	1 cut(s)	868
PciI	ACATGT	1 cut(s)	1061
PcsI	WCGNNNNNNNCGW	2 cut(s)	85, 444
PctI	GAATGC	1 cut(s)	674
PfeI	GAWTC	5 cut(s)	219, 542, 584, 789, 1024
PflFI	GACNNNGTC	1 cut(s)	443
PflMI	CCANNNNNTGG	1 cut(s)	328
PkrI	GCNGC	1 cut(s)	23
Ple19I	CGATCG	1 cut(s)	931
PleI	GAGTC	2 cut(s)	487, 654
PpsI	GAGTC	2 cut(s)	487, 654
PscI	ACATGT	1 cut(s)	1061
Psp124BI	GAGCTC	1 cut(s)	876
PspN4I	GGNNCC	2 cut(s)	334, 455
PspPI	GGNCC	2 cut(s)	254, 488
PstNI	CAGNNNCTG	1 cut(s)	587
PsuI	RGATCY	1 cut(s)	208
PsyI	GACNNNGTC	1 cut(s)	443
PvuI	CGATCG	1 cut(s)	931
RsaI	GTAC	3 cut(s)	121, 417, 1020
RsaNI	GTAC	3 cut(s)	120, 416, 1019
RseI	CAYNNNNRTG	1 cut(s)	1047
SacI	GAGCTC	1 cut(s)	876
SalI	GTCGAC	1 cut(s)	437
SaqAI	TTAA	5 cut(s)	125, 188, 294, 764, 839
SatI	GCNGC	1 cut(s)	22
Sau3AI	GATC	7 cut(s)	9, 208, 589, 802, 865, 928, 993
Sau96I	GGNCC	2 cut(s)	254, 488
SchI	GAGTC	2 cut(s)	487, 654
SduI	GDGCHC	2 cut(s)	434, 876
SfaNI	GCATC	1 cut(s)	460
SinI	GGWCC	2 cut(s)	254, 488
SmiMI	CAYNNNNRTG	1 cut(s)	1047
SphI	GCATGC	1 cut(s)	477
Sse9I	AATT	7 cut(s)	36, 83, 624, 686, 885, 904, 943
SspMI	CTAG	4 cut(s)	57, 267, 465, 806
SstI	GAGCTC	1 cut(s)	876
StyI	CCWWGG	2 cut(s)	266, 1158
TaaI	ACNGT	3 cut(s)	54, 169, 1180
TaqI	TCGA	8 cut(s)	15, 45, 310, 438, 622, 852, 996, 1211
TaqII	GACCGA	1 cut(s)	505
TasI	AATT	7 cut(s)	36, 83, 624, 686, 885, 904, 943
TatI	WGTACW	2 cut(s)	415, 1018
TfiI	GAWTC	5 cut(s)	219, 542, 584, 789, 1024
Tru1I	TTAA	5 cut(s)	125, 188, 294, 764, 839
Tru9I	TTAA	5 cut(s)	125, 188, 294, 764, 839
TscAI	CASTG	2 cut(s)	172, 1228
TseFI	GTSAC	1 cut(s)	163
TseI	GCWGC	1 cut(s)	21
Tsp45I	GTSAC	1 cut(s)	163
TspDTI	ATGAA	9 cut(s)	126, 211, 246, 305, 413, 642, 995, 1031, 1113
TspGWI	ACGGA	2 cut(s)	424, 729
TspRI	CASTG	2 cut(s)	172, 1228
Tth111I	GACNNNGTC	1 cut(s)	443
Van91I	CCANNNNNTGG	1 cut(s)	328
VpaK11BI	GGWCC	2 cut(s)	254, 488
XapI	RAATTY	1 cut(s)	36
XceI	RCATGY	2 cut(s)	477, 1065
XmaJI	CCTAGG	1 cut(s)	266
XmiI	GTMKAC	1 cut(s)	438
XspI	CTAG	4 cut(s)	57, 267, 465, 806
Zsp2I	ATGCAT	1 cut(s)	475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.