ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| COX17 | PF05051 | 36 - 80 | 5.5e-21 | Cytochrome C oxidase copper chaperone (COX17) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 76 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 65 |
| AgsI | TTSAA | 1 cut(s) | 235 |
| AjiI | CACGTC | 1 cut(s) | 213 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 74, 106 |
| AluBI | AGCT | 1 cut(s) | 145 |
| AluI | AGCT | 1 cut(s) | 145 |
| AlwI | GGATC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 3 cut(s) | 55, 145, 166 |
| AsuHPI | GGTGA | 1 cut(s) | 185 |
| BbvI | GCAGC | 3 cut(s) | 67, 132, 178 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 138, 172 |
| BglII | AGATCT | 1 cut(s) | 114 |
| BisI | GCNGC | 3 cut(s) | 56, 146, 167 |
| BlsI | GCNGC | 3 cut(s) | 57, 147, 168 |
| BmgBI | CACGTC | 1 cut(s) | 213 |
| BmsI | GCATC | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 1 cut(s) | 36 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseDI | CCNNGG | 1 cut(s) | 36 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseXI | GCAGC | 3 cut(s) | 67, 132, 178 |
| BsgI | GTGCAG | 2 cut(s) | 185, 243 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BsmI | GAATGC | 1 cut(s) | 161 |
| Bsp143I | GATC | 2 cut(s) | 68, 114 |
| BspPI | GGATC | 1 cut(s) | 76 |
| BssECI | CCNNGG | 1 cut(s) | 36 |
| BssMI | GATC | 2 cut(s) | 68, 114 |
| BssT1I | CCWWGG | 1 cut(s) | 36 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 127 |
| BstDEI | CTNAG | 1 cut(s) | 99 |
| BstKTI | GATC | 2 cut(s) | 71, 117 |
| BstMBI | GATC | 2 cut(s) | 68, 114 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 47, 52, 126 |
| BstV1I | GCAGC | 3 cut(s) | 67, 132, 178 |
| BstX2I | RGATCY | 1 cut(s) | 114 |
| BstYI | RGATCY | 1 cut(s) | 114 |
| BtrI | CACGTC | 1 cut(s) | 213 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 127 |
| CviAII | CATG | 1 cut(s) | 170 |
| CviJI | RGCY | 8 cut(s) | 41, 50, 58, 74, 103, 145, 203, 231 |
| CviKI_1 | RGCY | 8 cut(s) | 41, 50, 58, 74, 103, 145, 203, 231 |
| DdeI | CTNAG | 1 cut(s) | 99 |
| DpnI | GATC | 2 cut(s) | 70, 116 |
| DpnII | GATC | 2 cut(s) | 68, 114 |
| Eco130I | CCWWGG | 1 cut(s) | 36 |
| EcoT14I | CCWWGG | 1 cut(s) | 36 |
| EcoT22I | ATGCAT | 1 cut(s) | 161 |
| ErhI | CCWWGG | 1 cut(s) | 36 |
| FaeI | CATG | 1 cut(s) | 173 |
| FaiI | YATR | 2 cut(s) | 171, 207 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 74, 106 |
| FatI | CATG | 1 cut(s) | 169 |
| Fnu4HI | GCNGC | 3 cut(s) | 56, 146, 167 |
| Fsp4HI | GCNGC | 3 cut(s) | 56, 146, 167 |
| GluI | GCNGC | 3 cut(s) | 56, 146, 167 |
| Hin1II | CATG | 1 cut(s) | 173 |
| HphI | GGTGA | 1 cut(s) | 185 |
| Hpy166II | GTNNAC | 1 cut(s) | 8 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 1 cut(s) | 79 |
| Hpy8I | GTNNAC | 1 cut(s) | 8 |
| HpyAV | CCTTC | 1 cut(s) | 227 |
| HpyCH4IV | ACGT | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 5 cut(s) | 55, 159, 166, 188, 224 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 47, 52, 126 |
| HpyF3I | CTNAG | 1 cut(s) | 99 |
| HpySE526I | ACGT | 1 cut(s) | 212 |
| Hsp92II | CATG | 1 cut(s) | 173 |
| Kzo9I | GATC | 2 cut(s) | 68, 114 |
| LpnPI | CCDG | 2 cut(s) | 60, 144 |
| Lsp1109I | GCAGC | 3 cut(s) | 67, 132, 178 |
| LweI | GCATC | 1 cut(s) | 169 |
| MaeII | ACGT | 1 cut(s) | 212 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MalI | GATC | 2 cut(s) | 70, 116 |
| MboI | GATC | 2 cut(s) | 68, 114 |
| MboII | GAAGA | 3 cut(s) | 121, 124, 188 |
| MflI | RGATCY | 1 cut(s) | 114 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 3 cut(s) | 40, 193, 220 |
| Mph1103I | ATGCAT | 1 cut(s) | 161 |
| Mva1269I | GAATGC | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 47, 52, 126 |
| NdeII | GATC | 2 cut(s) | 68, 114 |
| NlaIII | CATG | 1 cut(s) | 173 |
| NmuCI | GTSAC | 1 cut(s) | 76 |
| NsiI | ATGCAT | 1 cut(s) | 161 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 77 |
| PctI | GAATGC | 1 cut(s) | 161 |
| PkrI | GCNGC | 3 cut(s) | 57, 147, 168 |
| PsuI | RGATCY | 1 cut(s) | 114 |
| SatI | GCNGC | 3 cut(s) | 56, 146, 167 |
| Sau3AI | GATC | 2 cut(s) | 68, 114 |
| SetI | ASST | 2 cut(s) | 147, 215 |
| SfaNI | GCATC | 1 cut(s) | 169 |
| StyI | CCWWGG | 1 cut(s) | 36 |
| TaiI | ACGT | 1 cut(s) | 215 |
| TseFI | GTSAC | 1 cut(s) | 76 |
| TseI | GCWGC | 3 cut(s) | 55, 145, 166 |
| Tsp45I | GTSAC | 1 cut(s) | 76 |
| TspDTI | ATGAA | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 1 cut(s) | 161 |