Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 285 |
| AccIII | TCCGGA | 1 cut(s) | 232 |
| AciI | CCGC | 1 cut(s) | 390 |
| AclWI | GGATC | 2 cut(s) | 138, 224 |
| AcoI | YGGCCR | 1 cut(s) | 238 |
| AcsI | RAATTY | 1 cut(s) | 74 |
| AcuI | CTGAAG | 1 cut(s) | 198 |
| AfeI | AGCGCT | 1 cut(s) | 257 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 285 |
| AgsI | TTSAA | 1 cut(s) | 405 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 171, 203 |
| Alw26I | GTCTC | 2 cut(s) | 19, 304 |
| AlwI | GGATC | 2 cut(s) | 138, 224 |
| Aor13HI | TCCGGA | 1 cut(s) | 232 |
| Aor51HI | AGCGCT | 1 cut(s) | 257 |
| AoxI | GGCC | 1 cut(s) | 238 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| AspLEI | GCGC | 1 cut(s) | 258 |
| BalI | TGGCCA | 1 cut(s) | 240 |
| BccI | CCATC | 3 cut(s) | 27, 230, 370 |
| BceAI | ACGGC | 1 cut(s) | 403 |
| BcoDI | GTCTC | 2 cut(s) | 19, 304 |
| BfmI | CTRYAG | 1 cut(s) | 26 |
| BfoI | RGCGCY | 1 cut(s) | 259 |
| BsaI | GGTCTC | 2 cut(s) | 19, 304 |
| BsaWI | WCCGGW | 1 cut(s) | 232 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 285 |
| Bse1I | ACTGG | 1 cut(s) | 87 |
| Bse3DI | GCAATG | 1 cut(s) | 152 |
| BseAI | TCCGGA | 1 cut(s) | 232 |
| BseGI | GGATG | 2 cut(s) | 220, 241 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 285 |
| BseMI | GCAATG | 1 cut(s) | 152 |
| BseMII | CTCAG | 1 cut(s) | 294 |
| BseNI | ACTGG | 1 cut(s) | 87 |
| BshFI | GGCC | 1 cut(s) | 240 |
| BsiSI | CCGG | 1 cut(s) | 233 |
| BslFI | GGGAC | 1 cut(s) | 180 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 285 |
| BsmAI | GTCTC | 2 cut(s) | 19, 304 |
| BsmFI | GGGAC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 240 |
| Bso31I | GGTCTC | 2 cut(s) | 19, 304 |
| Bsp13I | TCCGGA | 1 cut(s) | 232 |
| Bsp143I | GATC | 3 cut(s) | 130, 229, 335 |
| BspACI | CCGC | 1 cut(s) | 390 |
| BspANI | GGCC | 1 cut(s) | 240 |
| BspCNI | CTCAG | 1 cut(s) | 295 |
| BspEI | TCCGGA | 1 cut(s) | 232 |
| BspPI | GGATC | 2 cut(s) | 138, 224 |
| BspTNI | GGTCTC | 2 cut(s) | 19, 304 |
| BsrDI | GCAATG | 1 cut(s) | 152 |
| BsrI | ACTGG | 1 cut(s) | 87 |
| BssMI | GATC | 3 cut(s) | 130, 229, 335 |
| Bst4CI | ACNGT | 2 cut(s) | 58, 325 |
| Bst6I | CTCTTC | 1 cut(s) | 345 |
| BstC8I | GCNNGC | 1 cut(s) | 254 |
| BstDEI | CTNAG | 1 cut(s) | 303 |
| BstF5I | GGATG | 2 cut(s) | 220, 241 |
| BstH2I | RGCGCY | 1 cut(s) | 259 |
| BstHHI | GCGC | 1 cut(s) | 258 |
| BstKTI | GATC | 3 cut(s) | 133, 232, 338 |
| BstMAI | GTCTC | 2 cut(s) | 19, 304 |
| BstMBI | GATC | 3 cut(s) | 130, 229, 335 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 253 |
| BstSFI | CTRYAG | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 240 |
| BtsCI | GGATG | 2 cut(s) | 220, 241 |
| BtsIMutI | CAGTG | 1 cut(s) | 174 |
| Cac8I | GCNNGC | 1 cut(s) | 254 |
| CfoI | GCGC | 1 cut(s) | 258 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviJI | RGCY | 5 cut(s) | 6, 147, 240, 285, 317 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 147, 240, 285, 317 |
| DdeI | CTNAG | 1 cut(s) | 303 |
| DpnI | GATC | 3 cut(s) | 132, 231, 337 |
| DpnII | GATC | 3 cut(s) | 130, 229, 335 |
| EaeI | YGGCCR | 1 cut(s) | 238 |
| Eam1104I | CTCTTC | 1 cut(s) | 345 |
| EarI | CTCTTC | 1 cut(s) | 345 |
| Eco31I | GGTCTC | 2 cut(s) | 19, 304 |
| Eco47III | AGCGCT | 1 cut(s) | 257 |
| Eco57I | CTGAAG | 1 cut(s) | 198 |
| EcoT22I | ATGCAT | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 6 cut(s) | 90, 120, 135, 150, 293, 415 |
| FaqI | GGGAC | 1 cut(s) | 180 |
| FatI | CATG | 1 cut(s) | 133 |
| FokI | GGATG | 2 cut(s) | 227, 248 |
| GlaI | GCGC | 1 cut(s) | 257 |
| HaeII | RGCGCY | 1 cut(s) | 259 |
| HaeIII | GGCC | 1 cut(s) | 240 |
| HapII | CCGG | 1 cut(s) | 233 |
| HhaI | GCGC | 1 cut(s) | 258 |
| Hin1II | CATG | 1 cut(s) | 137 |
| Hin6I | GCGC | 1 cut(s) | 256 |
| HinP1I | GCGC | 1 cut(s) | 256 |
| HinfI | GANTC | 1 cut(s) | 401 |
| HpaII | CCGG | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 1 cut(s) | 385 |
| Hpy188I | TCNGA | 2 cut(s) | 304, 340 |
| Hpy188III | TCNNGA | 1 cut(s) | 233 |
| Hpy8I | GTNNAC | 1 cut(s) | 385 |
| HpyAV | CCTTC | 1 cut(s) | 289 |
| HpyCH4III | ACNGT | 2 cut(s) | 58, 325 |
| HpyCH4V | TGCA | 4 cut(s) | 152, 157, 209, 247 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 253 |
| HpyF3I | CTNAG | 1 cut(s) | 303 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| HspAI | GCGC | 1 cut(s) | 256 |
| Kpn2I | TCCGGA | 1 cut(s) | 232 |
| Kzo9I | GATC | 3 cut(s) | 130, 229, 335 |
| LpnPI | CCDG | 6 cut(s) | 68, 81, 129, 246, 271, 303 |
| MalI | GATC | 3 cut(s) | 132, 231, 337 |
| MboI | GATC | 3 cut(s) | 130, 229, 335 |
| MboII | GAAGA | 3 cut(s) | 135, 191, 362 |
| MlsI | TGGCCA | 1 cut(s) | 240 |
| MluCI | AATT | 1 cut(s) | 74 |
| MluNI | TGGCCA | 1 cut(s) | 240 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 8 cut(s) | 4, 157, 186, 192, 340, 342, 353, 403 |
| Mox20I | TGGCCA | 1 cut(s) | 240 |
| Mph1103I | ATGCAT | 1 cut(s) | 154 |
| MroI | TCCGGA | 1 cut(s) | 232 |
| MscI | TGGCCA | 1 cut(s) | 240 |
| MseI | TTAA | 1 cut(s) | 39 |
| Msp20I | TGGCCA | 1 cut(s) | 240 |
| MspI | CCGG | 1 cut(s) | 233 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 253 |
| NdeII | GATC | 3 cut(s) | 130, 229, 335 |
| NlaIII | CATG | 1 cut(s) | 137 |
| NsiI | ATGCAT | 1 cut(s) | 154 |
| PfeI | GAWTC | 1 cut(s) | 401 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 285 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| Sau3AI | GATC | 3 cut(s) | 130, 229, 335 |
| SetI | ASST | 5 cut(s) | 15, 197, 300, 334, 364 |
| SfcI | CTRYAG | 1 cut(s) | 26 |
| Sse9I | AATT | 1 cut(s) | 74 |
| SsiI | CCGC | 1 cut(s) | 390 |
| TaaI | ACNGT | 2 cut(s) | 58, 325 |
| TaqI | TCGA | 4 cut(s) | 224, 328, 334, 345 |
| TasI | AATT | 1 cut(s) | 74 |
| TfiI | GAWTC | 1 cut(s) | 401 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TscAI | CASTG | 1 cut(s) | 181 |
| TspDTI | ATGAA | 3 cut(s) | 105, 308, 324 |
| TspRI | CASTG | 1 cut(s) | 181 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 285 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 30 |
| Zsp2I | ATGCAT | 1 cut(s) | 154 |