ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 16 |
| Acc36I | ACCTGC | 1 cut(s) | 16 |
| AccII | CGCG | 1 cut(s) | 870 |
| AciI | CCGC | 4 cut(s) | 355, 464, 502, 868 |
| AclI | AACGTT | 1 cut(s) | 99 |
| AfaI | GTAC | 1 cut(s) | 315 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 508, 873 |
| AflII | CTTAAG | 1 cut(s) | 506 |
| AgsI | TTSAA | 9 cut(s) | 68, 382, 569, 632, 641, 659, 677, 826, 854 |
| AluBI | AGCT | 4 cut(s) | 51, 123, 373, 461 |
| AluI | AGCT | 4 cut(s) | 51, 123, 373, 461 |
| AoxI | GGCC | 2 cut(s) | 299, 432 |
| ApeKI | GCWGC | 3 cut(s) | 4, 48, 461 |
| AspS9I | GGNCC | 1 cut(s) | 700 |
| AsuHPI | GGTGA | 2 cut(s) | 40, 536 |
| AvaII | GGWCC | 1 cut(s) | 700 |
| BanII | GRGCYC | 1 cut(s) | 211 |
| BbvI | GCAGC | 3 cut(s) | 16, 60, 448 |
| BccI | CCATC | 1 cut(s) | 164 |
| BceAI | ACGGC | 1 cut(s) | 347 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 108, 142 |
| BciVI | GTATCC | 2 cut(s) | 351, 583 |
| BclI | TGATCA | 1 cut(s) | 30 |
| BfaI | CTAG | 2 cut(s) | 789, 834 |
| BfmI | CTRYAG | 3 cut(s) | 46, 82, 198 |
| BfrI | CTTAAG | 1 cut(s) | 506 |
| BfuAI | ACCTGC | 1 cut(s) | 16 |
| BfuI | GTATCC | 2 cut(s) | 351, 583 |
| BglII | AGATCT | 1 cut(s) | 679 |
| BisI | GCNGC | 4 cut(s) | 5, 49, 462, 502 |
| BlsI | GCNGC | 4 cut(s) | 6, 50, 463, 503 |
| Bme18I | GGWCC | 1 cut(s) | 700 |
| BmgT120I | GGNCC | 1 cut(s) | 700 |
| BmrI | ACTGGG | 2 cut(s) | 81, 114 |
| BmsI | GCATC | 2 cut(s) | 342, 489 |
| BmuI | ACTGGG | 2 cut(s) | 81, 114 |
| BsaJI | CCNNGG | 1 cut(s) | 410 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 107, 137 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 508, 873 |
| Bse118I | RCCGGY | 1 cut(s) | 247 |
| Bse1I | ACTGG | 2 cut(s) | 76, 109 |
| Bse3DI | GCAATG | 1 cut(s) | 702 |
| BseDI | CCNNGG | 1 cut(s) | 410 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 508, 873 |
| BseMI | GCAATG | 1 cut(s) | 702 |
| BseMII | CTCAG | 1 cut(s) | 362 |
| BseNI | ACTGG | 2 cut(s) | 76, 109 |
| BseRI | GAGGAG | 2 cut(s) | 629, 632 |
| BseXI | GCAGC | 3 cut(s) | 16, 60, 448 |
| Bsh1236I | CGCG | 1 cut(s) | 870 |
| BshFI | GGCC | 2 cut(s) | 301, 434 |
| BsiSI | CCGG | 1 cut(s) | 248 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 508, 873 |
| BsnI | GGCC | 2 cut(s) | 301, 434 |
| Bsp1286I | GDGCHC | 1 cut(s) | 211 |
| Bsp1407I | TGTACA | 1 cut(s) | 313 |
| Bsp143I | GATC | 2 cut(s) | 30, 679 |
| BspACI | CCGC | 4 cut(s) | 355, 464, 502, 868 |
| BspANI | GGCC | 2 cut(s) | 301, 434 |
| BspCNI | CTCAG | 1 cut(s) | 361 |
| BspFNI | CGCG | 1 cut(s) | 870 |
| BspMAI | CTGCAG | 1 cut(s) | 50 |
| BspMI | ACCTGC | 1 cut(s) | 16 |
| BspTI | CTTAAG | 1 cut(s) | 506 |
| BsrDI | GCAATG | 1 cut(s) | 702 |
| BsrFI | RCCGGY | 1 cut(s) | 247 |
| BsrGI | TGTACA | 1 cut(s) | 313 |
| BsrI | ACTGG | 2 cut(s) | 76, 109 |
| BssAI | RCCGGY | 1 cut(s) | 247 |
| BssECI | CCNNGG | 1 cut(s) | 410 |
| BssMI | GATC | 2 cut(s) | 30, 679 |
| BssT1I | CCWWGG | 1 cut(s) | 410 |
| Bst6I | CTCTTC | 2 cut(s) | 433, 654 |
| BstAFI | CTTAAG | 1 cut(s) | 506 |
| BstAUI | TGTACA | 1 cut(s) | 313 |
| BstC8I | GCNNGC | 1 cut(s) | 375 |
| BstDEI | CTNAG | 2 cut(s) | 303, 348 |
| BstFNI | CGCG | 1 cut(s) | 870 |
| BstKTI | GATC | 2 cut(s) | 33, 682 |
| BstMBI | GATC | 2 cut(s) | 30, 679 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 458 |
| BstSFI | CTRYAG | 3 cut(s) | 46, 82, 198 |
| BstUI | CGCG | 1 cut(s) | 870 |
| BstV1I | GCAGC | 3 cut(s) | 16, 60, 448 |
| BstX2I | RGATCY | 1 cut(s) | 679 |
| BstYI | RGATCY | 1 cut(s) | 679 |
| BsuI | GTATCC | 2 cut(s) | 351, 583 |
| BsuRI | GGCC | 2 cut(s) | 301, 434 |
| BtsI | GCAGTG | 1 cut(s) | 43 |
| BtsIMutI | CAGTG | 1 cut(s) | 43 |
| BveI | ACCTGC | 1 cut(s) | 16 |
| Cac8I | GCNNGC | 1 cut(s) | 375 |
| Cfr10I | RCCGGY | 1 cut(s) | 247 |
| Cfr13I | GGNCC | 1 cut(s) | 700 |
| Csp6I | GTAC | 1 cut(s) | 314 |
| CviAII | CATG | 4 cut(s) | 55, 167, 364, 710 |
| CviQI | GTAC | 1 cut(s) | 314 |
| DdeI | CTNAG | 2 cut(s) | 303, 348 |
| DpnI | GATC | 2 cut(s) | 32, 681 |
| DpnII | GATC | 2 cut(s) | 30, 679 |
| Eam1104I | CTCTTC | 2 cut(s) | 433, 654 |
| EarI | CTCTTC | 2 cut(s) | 433, 654 |
| Eco130I | CCWWGG | 1 cut(s) | 410 |
| Eco24I | GRGCYC | 1 cut(s) | 211 |
| Eco47I | GGWCC | 1 cut(s) | 700 |
| EcoT14I | CCWWGG | 1 cut(s) | 410 |
| EcoT38I | GRGCYC | 1 cut(s) | 211 |
| ErhI | CCWWGG | 1 cut(s) | 410 |
| FaeI | CATG | 4 cut(s) | 58, 170, 367, 713 |
| FatI | CATG | 4 cut(s) | 54, 166, 363, 709 |
| FauI | CCCGC | 1 cut(s) | 875 |
| FauNDI | CATATG | 2 cut(s) | 20, 213 |
| FbaI | TGATCA | 1 cut(s) | 30 |
| Fnu4HI | GCNGC | 4 cut(s) | 5, 49, 462, 502 |
| FriOI | GRGCYC | 1 cut(s) | 211 |
| Fsp4HI | GCNGC | 4 cut(s) | 5, 49, 462, 502 |
| FspBI | CTAG | 2 cut(s) | 789, 834 |
| GluI | GCNGC | 4 cut(s) | 5, 49, 462, 502 |
| HaeIII | GGCC | 2 cut(s) | 301, 434 |
| HapII | CCGG | 1 cut(s) | 248 |
| Hin1II | CATG | 4 cut(s) | 58, 170, 367, 713 |
| HindIII | AAGCTT | 1 cut(s) | 371 |
| HinfI | GANTC | 4 cut(s) | 273, 346, 779, 785 |
| HpaII | CCGG | 1 cut(s) | 248 |
| HphI | GGTGA | 2 cut(s) | 40, 536 |
| Hpy188I | TCNGA | 2 cut(s) | 351, 784 |
| Hpy188III | TCNNGA | 3 cut(s) | 161, 484, 789 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyAV | CCTTC | 3 cut(s) | 506, 563, 635 |
| HpyCH4IV | ACGT | 1 cut(s) | 99 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 48, 695, 713 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 458 |
| HpyF3I | CTNAG | 2 cut(s) | 303, 348 |
| HpySE526I | ACGT | 1 cut(s) | 99 |
| Hsp92II | CATG | 4 cut(s) | 58, 170, 367, 713 |
| Ksp22I | TGATCA | 1 cut(s) | 30 |
| Kzo9I | GATC | 2 cut(s) | 30, 679 |
| LmnI | GCTCC | 1 cut(s) | 128 |
| LpnPI | CCDG | 7 cut(s) | 11, 19, 57, 90, 139, 261, 448 |
| Lsp1109I | GCAGC | 3 cut(s) | 16, 60, 448 |
| LweI | GCATC | 2 cut(s) | 342, 489 |
| MaeI | CTAG | 2 cut(s) | 789, 834 |
| MaeII | ACGT | 1 cut(s) | 99 |
| MaeIII | GTNAC | 4 cut(s) | 100, 113, 161, 754 |
| MalI | GATC | 2 cut(s) | 32, 681 |
| MboI | GATC | 2 cut(s) | 30, 679 |
| MflI | RGATCY | 1 cut(s) | 679 |
| MhlI | GDGCHC | 1 cut(s) | 211 |
| MluCI | AATT | 5 cut(s) | 63, 156, 224, 253, 627 |
| MlyI | GAGTC | 1 cut(s) | 340 |
| MmeI | TCCRAC | 1 cut(s) | 450 |
| MseI | TTAA | 4 cut(s) | 240, 252, 497, 507 |
| MslI | CAYNNNNRTG | 1 cut(s) | 708 |
| MspCI | CTTAAG | 1 cut(s) | 506 |
| MspI | CCGG | 1 cut(s) | 248 |
| MvnI | CGCG | 1 cut(s) | 870 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 458 |
| NdeI | CATATG | 2 cut(s) | 20, 213 |
| NdeII | GATC | 2 cut(s) | 30, 679 |
| NlaIII | CATG | 4 cut(s) | 58, 170, 367, 713 |
| NmuCI | GTSAC | 1 cut(s) | 161 |
| PaqCI | CACCTGC | 1 cut(s) | 16 |
| PfeI | GAWTC | 3 cut(s) | 273, 779, 785 |
| PflFI | GACNNNGTC | 1 cut(s) | 14 |
| PkrI | GCNGC | 4 cut(s) | 6, 50, 463, 503 |
| PleI | GAGTC | 1 cut(s) | 340 |
| PpsI | GAGTC | 1 cut(s) | 340 |
| Psp1406I | AACGTT | 1 cut(s) | 99 |
| PspPI | GGNCC | 1 cut(s) | 700 |
| PstI | CTGCAG | 1 cut(s) | 50 |
| PsuI | RGATCY | 1 cut(s) | 679 |
| PsyI | GACNNNGTC | 1 cut(s) | 14 |
| RsaI | GTAC | 1 cut(s) | 315 |
| RsaNI | GTAC | 1 cut(s) | 314 |
| RseI | CAYNNNNRTG | 1 cut(s) | 708 |
| SaqAI | TTAA | 4 cut(s) | 240, 252, 497, 507 |
| SatI | GCNGC | 4 cut(s) | 5, 49, 462, 502 |
| Sau3AI | GATC | 2 cut(s) | 30, 679 |
| Sau96I | GGNCC | 1 cut(s) | 700 |
| SchI | GAGTC | 1 cut(s) | 340 |
| SduI | GDGCHC | 1 cut(s) | 211 |
| SfaNI | GCATC | 2 cut(s) | 342, 489 |
| SfcI | CTRYAG | 3 cut(s) | 46, 82, 198 |
| SinI | GGWCC | 1 cut(s) | 700 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 708 |
| SmlI | CTYRAG | 1 cut(s) | 506 |
| SmoI | CTYRAG | 1 cut(s) | 506 |
| Sse9I | AATT | 5 cut(s) | 63, 156, 224, 253, 627 |
| SsiI | CCGC | 4 cut(s) | 355, 464, 502, 868 |
| SspMI | CTAG | 2 cut(s) | 789, 834 |
| StyI | CCWWGG | 1 cut(s) | 410 |
| TaiI | ACGT | 1 cut(s) | 102 |
| TaqI | TCGA | 1 cut(s) | 483 |
| TasI | AATT | 5 cut(s) | 63, 156, 224, 253, 627 |
| TatI | WGTACW | 1 cut(s) | 313 |
| TauI | GCSGC | 1 cut(s) | 504 |
| TfiI | GAWTC | 3 cut(s) | 273, 779, 785 |
| Tru1I | TTAA | 4 cut(s) | 240, 252, 497, 507 |
| Tru9I | TTAA | 4 cut(s) | 240, 252, 497, 507 |
| TscAI | CASTG | 1 cut(s) | 50 |
| TseFI | GTSAC | 1 cut(s) | 161 |
| TseI | GCWGC | 3 cut(s) | 4, 48, 461 |
| Tsp45I | GTSAC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 5 cut(s) | 43, 206, 666, 753, 873 |
| TspRI | CASTG | 1 cut(s) | 50 |
| Tth111I | GACNNNGTC | 1 cut(s) | 14 |
| Vha464I | CTTAAG | 1 cut(s) | 506 |
| VpaK11BI | GGWCC | 1 cut(s) | 700 |
| XbaI | TCTAGA | 1 cut(s) | 788 |
| XspI | CTAG | 2 cut(s) | 789, 834 |