ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 243 |
| AciI | CCGC | 2 cut(s) | 181, 209 |
| AclWI | GGATC | 3 cut(s) | 142, 227, 235 |
| AcoI | YGGCCR | 1 cut(s) | 271 |
| AcsI | RAATTY | 1 cut(s) | 257 |
| AcyI | GRCGYC | 1 cut(s) | 338 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AlwI | GGATC | 3 cut(s) | 142, 227, 235 |
| Aor13HI | TCCGGA | 1 cut(s) | 243 |
| AoxI | GGCC | 1 cut(s) | 271 |
| ApoI | RAATTY | 1 cut(s) | 257 |
| AspS9I | GGNCC | 1 cut(s) | 327 |
| AsuHPI | GGTGA | 1 cut(s) | 226 |
| AvaII | GGWCC | 1 cut(s) | 327 |
| BccI | CCATC | 1 cut(s) | 45 |
| BfaI | CTAG | 3 cut(s) | 188, 252, 365 |
| Bme18I | GGWCC | 1 cut(s) | 327 |
| BmgT120I | GGNCC | 1 cut(s) | 327 |
| BsaAI | YACGTR | 1 cut(s) | 90 |
| BsaHI | GRCGYC | 1 cut(s) | 338 |
| BsaJI | CCNNGG | 1 cut(s) | 41 |
| BsaWI | WCCGGW | 1 cut(s) | 243 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| Bse118I | RCCGGY | 1 cut(s) | 273 |
| BseAI | TCCGGA | 1 cut(s) | 243 |
| BseDI | CCNNGG | 1 cut(s) | 41 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseRI | GAGGAG | 1 cut(s) | 173 |
| Bsh1285I | CGRYCG | 1 cut(s) | 74 |
| BshFI | GGCC | 1 cut(s) | 273 |
| BsiEI | CGRYCG | 1 cut(s) | 74 |
| BsiSI | CCGG | 2 cut(s) | 244, 274 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsnI | GGCC | 1 cut(s) | 273 |
| Bsp13I | TCCGGA | 1 cut(s) | 243 |
| Bsp143I | GATC | 3 cut(s) | 134, 232, 240 |
| Bsp19I | CCATGG | 1 cut(s) | 41 |
| BspACI | CCGC | 2 cut(s) | 181, 209 |
| BspANI | GGCC | 1 cut(s) | 273 |
| BspEI | TCCGGA | 1 cut(s) | 243 |
| BspPI | GGATC | 3 cut(s) | 142, 227, 235 |
| BsrFI | RCCGGY | 1 cut(s) | 273 |
| BssAI | RCCGGY | 1 cut(s) | 273 |
| BssECI | CCNNGG | 1 cut(s) | 41 |
| BssMI | GATC | 3 cut(s) | 134, 232, 240 |
| BssNI | GRCGYC | 1 cut(s) | 338 |
| BssT1I | CCWWGG | 1 cut(s) | 41 |
| Bst4CI | ACNGT | 3 cut(s) | 55, 151, 375 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstACI | GRCGYC | 1 cut(s) | 338 |
| BstBAI | YACGTR | 1 cut(s) | 90 |
| BstDSI | CCRYGG | 1 cut(s) | 41 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstKTI | GATC | 3 cut(s) | 137, 235, 243 |
| BstMBI | GATC | 3 cut(s) | 134, 232, 240 |
| BstMCI | CGRYCG | 1 cut(s) | 74 |
| BstX2I | RGATCY | 2 cut(s) | 134, 240 |
| BstYI | RGATCY | 2 cut(s) | 134, 240 |
| BsuRI | GGCC | 1 cut(s) | 273 |
| BtgI | CCRYGG | 1 cut(s) | 41 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| Cfr10I | RCCGGY | 1 cut(s) | 273 |
| Cfr13I | GGNCC | 1 cut(s) | 327 |
| CseI | GACGC | 1 cut(s) | 346 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 76, 111 |
| CviAII | CATG | 1 cut(s) | 42 |
| CviJI | RGCY | 3 cut(s) | 80, 273, 308 |
| CviKI_1 | RGCY | 3 cut(s) | 80, 273, 308 |
| DpnI | GATC | 3 cut(s) | 136, 234, 242 |
| DpnII | GATC | 3 cut(s) | 134, 232, 240 |
| EaeI | YGGCCR | 1 cut(s) | 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| EciI | GGCGGA | 1 cut(s) | 224 |
| Eco130I | CCWWGG | 1 cut(s) | 41 |
| Eco47I | GGWCC | 1 cut(s) | 327 |
| EcoO109I | RGGNCCY | 1 cut(s) | 327 |
| EcoT14I | CCWWGG | 1 cut(s) | 41 |
| ErhI | CCWWGG | 1 cut(s) | 41 |
| FaeI | CATG | 1 cut(s) | 45 |
| FaiI | YATR | 5 cut(s) | 14, 29, 43, 93, 334 |
| FatI | CATG | 1 cut(s) | 41 |
| FokI | GGATG | 1 cut(s) | 24 |
| FspBI | CTAG | 3 cut(s) | 188, 252, 365 |
| HaeIII | GGCC | 1 cut(s) | 273 |
| HapII | CCGG | 2 cut(s) | 244, 274 |
| HgaI | GACGC | 1 cut(s) | 346 |
| Hin1I | GRCGYC | 1 cut(s) | 338 |
| Hin1II | CATG | 1 cut(s) | 45 |
| HincII | GTYRAC | 2 cut(s) | 147, 195 |
| HindII | GTYRAC | 2 cut(s) | 147, 195 |
| HpaI | GTTAAC | 1 cut(s) | 147 |
| HpaII | CCGG | 2 cut(s) | 244, 274 |
| HphI | GGTGA | 1 cut(s) | 226 |
| Hpy166II | GTNNAC | 2 cut(s) | 147, 195 |
| Hpy188III | TCNNGA | 2 cut(s) | 244, 355 |
| Hpy8I | GTNNAC | 2 cut(s) | 147, 195 |
| HpyCH4III | ACNGT | 3 cut(s) | 55, 151, 375 |
| HpyCH4IV | ACGT | 1 cut(s) | 89 |
| HpySE526I | ACGT | 1 cut(s) | 89 |
| Hsp92I | GRCGYC | 1 cut(s) | 338 |
| Hsp92II | CATG | 1 cut(s) | 45 |
| Kpn2I | TCCGGA | 1 cut(s) | 243 |
| KspAI | GTTAAC | 1 cut(s) | 147 |
| Kzo9I | GATC | 3 cut(s) | 134, 232, 240 |
| LpnPI | CCDG | 2 cut(s) | 257, 287 |
| MaeI | CTAG | 3 cut(s) | 188, 252, 365 |
| MaeII | ACGT | 1 cut(s) | 89 |
| MaeIII | GTNAC | 1 cut(s) | 369 |
| MalI | GATC | 3 cut(s) | 136, 234, 242 |
| MboI | GATC | 3 cut(s) | 134, 232, 240 |
| MboII | GAAGA | 4 cut(s) | 129, 215, 355, 358 |
| MflI | RGATCY | 2 cut(s) | 134, 240 |
| MluCI | AATT | 1 cut(s) | 257 |
| MnlI | CCTC | 8 cut(s) | 151, 154, 193, 199, 205, 298, 303, 318 |
| MroI | TCCGGA | 1 cut(s) | 243 |
| MseI | TTAA | 1 cut(s) | 146 |
| MspI | CCGG | 2 cut(s) | 244, 274 |
| NcoI | CCATGG | 1 cut(s) | 41 |
| NdeII | GATC | 3 cut(s) | 134, 232, 240 |
| NlaIII | CATG | 1 cut(s) | 45 |
| Ppu21I | YACGTR | 1 cut(s) | 90 |
| PpuMI | RGGWCCY | 1 cut(s) | 327 |
| Psp5II | RGGWCCY | 1 cut(s) | 327 |
| PspPI | GGNCC | 1 cut(s) | 327 |
| PspPPI | RGGWCCY | 1 cut(s) | 327 |
| PsuI | RGATCY | 2 cut(s) | 134, 240 |
| SaqAI | TTAA | 1 cut(s) | 146 |
| Sau3AI | GATC | 3 cut(s) | 134, 232, 240 |
| Sau96I | GGNCC | 1 cut(s) | 327 |
| SetI | ASST | 6 cut(s) | 92, 216, 253, 295, 329, 366 |
| SinI | GGWCC | 1 cut(s) | 327 |
| Sse9I | AATT | 1 cut(s) | 257 |
| SsiI | CCGC | 2 cut(s) | 181, 209 |
| SspMI | CTAG | 3 cut(s) | 188, 252, 365 |
| StyI | CCWWGG | 1 cut(s) | 41 |
| TaaI | ACNGT | 3 cut(s) | 55, 151, 375 |
| TaiI | ACGT | 1 cut(s) | 92 |
| TaqI | TCGA | 1 cut(s) | 354 |
| TaqII | GACCGA | 1 cut(s) | 60 |
| TasI | AATT | 1 cut(s) | 257 |
| Tru1I | TTAA | 1 cut(s) | 146 |
| Tru9I | TTAA | 1 cut(s) | 146 |
| VpaK11BI | GGWCC | 1 cut(s) | 327 |
| XapI | RAATTY | 1 cut(s) | 257 |
| XspI | CTAG | 3 cut(s) | 188, 252, 365 |