Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 25 |
| AclWI | GGATC | 1 cut(s) | 204 |
| AcoI | YGGCCR | 1 cut(s) | 79 |
| AfaI | GTAC | 1 cut(s) | 168 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 149 |
| AgsI | TTSAA | 3 cut(s) | 51, 66, 242 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 204, 236 |
| AluBI | AGCT | 1 cut(s) | 85 |
| AluI | AGCT | 1 cut(s) | 85 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AlwI | GGATC | 1 cut(s) | 204 |
| AoxI | GGCC | 2 cut(s) | 79, 138 |
| ApeKI | GCWGC | 1 cut(s) | 249 |
| AspS9I | GGNCC | 1 cut(s) | 139 |
| AsuC2I | CCSGG | 1 cut(s) | 114 |
| BalI | TGGCCA | 1 cut(s) | 81 |
| BbvI | GCAGC | 1 cut(s) | 236 |
| BccI | CCATC | 1 cut(s) | 30 |
| BcnI | CCSGG | 1 cut(s) | 114 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| BisI | GCNGC | 1 cut(s) | 250 |
| BlsI | GCNGC | 1 cut(s) | 251 |
| Bme1390I | CCNGG | 1 cut(s) | 114 |
| BmgT120I | GGNCC | 1 cut(s) | 139 |
| BmiI | GGNNCC | 1 cut(s) | 141 |
| BmrFI | CCNGG | 1 cut(s) | 114 |
| BpuMI | CCSGG | 1 cut(s) | 114 |
| BsaAI | YACGTR | 1 cut(s) | 170 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 208, 238 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseRI | GAGGAG | 1 cut(s) | 194 |
| BseXI | GCAGC | 1 cut(s) | 236 |
| BshFI | GGCC | 2 cut(s) | 81, 140 |
| BsiSI | CCGG | 1 cut(s) | 113 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| BsnI | GGCC | 2 cut(s) | 81, 140 |
| Bsp143I | GATC | 1 cut(s) | 196 |
| BspANI | GGCC | 2 cut(s) | 81, 140 |
| BspLI | GGNNCC | 1 cut(s) | 141 |
| BspPI | GGATC | 1 cut(s) | 204 |
| BssMI | GATC | 1 cut(s) | 196 |
| BstBAI | YACGTR | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 1 cut(s) | 83 |
| BstKTI | GATC | 1 cut(s) | 199 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 1 cut(s) | 196 |
| BstSCI | CCNGG | 1 cut(s) | 112 |
| BstV1I | GCAGC | 1 cut(s) | 236 |
| BsuRI | GGCC | 2 cut(s) | 81, 140 |
| Cac8I | GCNNGC | 1 cut(s) | 83 |
| Cfr13I | GGNCC | 1 cut(s) | 139 |
| Csp6I | GTAC | 1 cut(s) | 167 |
| CviAII | CATG | 1 cut(s) | 276 |
| CviJI | RGCY | 3 cut(s) | 81, 85, 140 |
| CviKI_1 | RGCY | 3 cut(s) | 81, 85, 140 |
| CviQI | GTAC | 1 cut(s) | 167 |
| DpnI | GATC | 1 cut(s) | 198 |
| DpnII | GATC | 1 cut(s) | 196 |
| EaeI | YGGCCR | 1 cut(s) | 79 |
| EcoO109I | RGGNCCY | 1 cut(s) | 139 |
| FaeI | CATG | 1 cut(s) | 279 |
| FaiI | YATR | 2 cut(s) | 78, 277 |
| FatI | CATG | 1 cut(s) | 275 |
| Fnu4HI | GCNGC | 1 cut(s) | 250 |
| Fsp4HI | GCNGC | 1 cut(s) | 250 |
| GluI | GCNGC | 1 cut(s) | 250 |
| HaeIII | GGCC | 2 cut(s) | 81, 140 |
| HapII | CCGG | 1 cut(s) | 113 |
| Hin1II | CATG | 1 cut(s) | 279 |
| HinfI | GANTC | 1 cut(s) | 109 |
| HpaII | CCGG | 1 cut(s) | 113 |
| Hpy166II | GTNNAC | 2 cut(s) | 129, 173 |
| Hpy188III | TCNNGA | 1 cut(s) | 200 |
| Hpy8I | GTNNAC | 2 cut(s) | 129, 173 |
| Hpy99I | CGWCG | 1 cut(s) | 267 |
| HpyAV | CCTTC | 1 cut(s) | 130 |
| HpyCH4IV | ACGT | 4 cut(s) | 25, 169, 175, 262 |
| HpyCH4V | TGCA | 1 cut(s) | 252 |
| HpySE526I | ACGT | 4 cut(s) | 25, 169, 175, 262 |
| Hsp92II | CATG | 1 cut(s) | 279 |
| Kzo9I | GATC | 1 cut(s) | 196 |
| LpnPI | CCDG | 4 cut(s) | 95, 126, 156, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 236 |
| MaeII | ACGT | 4 cut(s) | 25, 169, 175, 262 |
| MalI | GATC | 1 cut(s) | 198 |
| MboI | GATC | 1 cut(s) | 196 |
| MboII | GAAGA | 1 cut(s) | 215 |
| MfeI | CAATTG | 1 cut(s) | 66 |
| MlsI | TGGCCA | 1 cut(s) | 81 |
| MluCI | AATT | 2 cut(s) | 66, 147 |
| MluNI | TGGCCA | 1 cut(s) | 81 |
| MnlI | CCTC | 2 cut(s) | 33, 172 |
| Mox20I | TGGCCA | 1 cut(s) | 81 |
| MscI | TGGCCA | 1 cut(s) | 81 |
| Msp20I | TGGCCA | 1 cut(s) | 81 |
| MspI | CCGG | 1 cut(s) | 113 |
| MspR9I | CCNGG | 1 cut(s) | 114 |
| MunI | CAATTG | 1 cut(s) | 66 |
| NciI | CCSGG | 1 cut(s) | 114 |
| NdeII | GATC | 1 cut(s) | 196 |
| NlaIII | CATG | 1 cut(s) | 279 |
| NlaIV | GGNNCC | 1 cut(s) | 141 |
| PfeI | GAWTC | 1 cut(s) | 109 |
| PkrI | GCNGC | 1 cut(s) | 251 |
| Ppu21I | YACGTR | 1 cut(s) | 170 |
| Psp1406I | AACGTT | 1 cut(s) | 25 |
| PspN4I | GGNNCC | 1 cut(s) | 141 |
| PspPI | GGNCC | 1 cut(s) | 139 |
| RsaI | GTAC | 1 cut(s) | 168 |
| RsaNI | GTAC | 1 cut(s) | 167 |
| SatI | GCNGC | 1 cut(s) | 250 |
| Sau3AI | GATC | 1 cut(s) | 196 |
| Sau96I | GGNCC | 1 cut(s) | 139 |
| ScrFI | CCNGG | 1 cut(s) | 114 |
| SetI | ASST | 7 cut(s) | 28, 87, 172, 178, 247, 258, 265 |
| Sse9I | AATT | 2 cut(s) | 66, 147 |
| StyD4I | CCNGG | 1 cut(s) | 112 |
| TaiI | ACGT | 4 cut(s) | 28, 172, 178, 265 |
| TaqI | TCGA | 2 cut(s) | 199, 265 |
| TasI | AATT | 2 cut(s) | 66, 147 |
| TfiI | GAWTC | 1 cut(s) | 109 |
| TseI | GCWGC | 1 cut(s) | 249 |
| TspDTI | ATGAA | 2 cut(s) | 149, 225 |