ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 97 |
| AciI | CCGC | 1 cut(s) | 190 |
| AcsI | RAATTY | 3 cut(s) | 344, 374, 398 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 73, 189, 327, 387 |
| AgsI | TTSAA | 1 cut(s) | 139 |
| AjnI | CCWGG | 1 cut(s) | 182 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 68, 100 |
| Alw26I | GTCTC | 2 cut(s) | 36, 354 |
| AoxI | GGCC | 2 cut(s) | 112, 317 |
| ApoI | RAATTY | 3 cut(s) | 344, 374, 398 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 9 |
| AspS9I | GGNCC | 2 cut(s) | 113, 318 |
| AsuHPI | GGTGA | 3 cut(s) | 233, 349, 370 |
| BbsI | GAAGAC | 1 cut(s) | 338 |
| BciT130I | CCWGG | 1 cut(s) | 184 |
| BcoDI | GTCTC | 2 cut(s) | 36, 354 |
| BfaI | CTAG | 1 cut(s) | 59 |
| BfuAI | ACCTGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 1 cut(s) | 184 |
| BmgT120I | GGNCC | 2 cut(s) | 113, 318 |
| BmiI | GGNNCC | 1 cut(s) | 320 |
| BmrFI | CCNGG | 1 cut(s) | 184 |
| BmsI | GCATC | 2 cut(s) | 177, 298 |
| BpiI | GAAGAC | 1 cut(s) | 338 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 270, 302 |
| BsaBI | GATNNNNATC | 1 cut(s) | 312 |
| BsaJI | CCNNGG | 1 cut(s) | 182 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 73, 189, 327, 387 |
| Bse1I | ACTGG | 1 cut(s) | 37 |
| Bse8I | GATNNNNATC | 1 cut(s) | 312 |
| BseBI | CCWGG | 1 cut(s) | 184 |
| BseDI | CCNNGG | 1 cut(s) | 182 |
| BseGI | GGATG | 3 cut(s) | 192, 198, 250 |
| BseJI | GATNNNNATC | 1 cut(s) | 312 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 73, 189, 327, 387 |
| BseMII | CTCAG | 1 cut(s) | 134 |
| BseNI | ACTGG | 1 cut(s) | 37 |
| BsgI | GTGCAG | 1 cut(s) | 125 |
| BshFI | GGCC | 2 cut(s) | 114, 319 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 73, 189, 327, 387 |
| BsmAI | GTCTC | 2 cut(s) | 36, 354 |
| BsnI | GGCC | 2 cut(s) | 114, 319 |
| BspACI | CCGC | 1 cut(s) | 190 |
| BspANI | GGCC | 2 cut(s) | 114, 319 |
| BspCNI | CTCAG | 1 cut(s) | 135 |
| BspLI | GGNNCC | 1 cut(s) | 320 |
| BspMI | ACCTGC | 1 cut(s) | 97 |
| BsrI | ACTGG | 1 cut(s) | 37 |
| BssECI | CCNNGG | 1 cut(s) | 182 |
| Bst2UI | CCWGG | 1 cut(s) | 184 |
| Bst4CI | ACNGT | 1 cut(s) | 337 |
| BstDEI | CTNAG | 2 cut(s) | 68, 143 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 71, 385 |
| BstF5I | GGATG | 3 cut(s) | 192, 198, 250 |
| BstMAI | GTCTC | 2 cut(s) | 36, 354 |
| BstNI | CCWGG | 1 cut(s) | 184 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstSCI | CCNGG | 1 cut(s) | 182 |
| BstV2I | GAAGAC | 1 cut(s) | 338 |
| BsuRI | GGCC | 2 cut(s) | 114, 319 |
| BtsCI | GGATG | 3 cut(s) | 192, 198, 250 |
| BveI | ACCTGC | 1 cut(s) | 97 |
| Cfr13I | GGNCC | 2 cut(s) | 113, 318 |
| CviAII | CATG | 2 cut(s) | 149, 167 |
| CviJI | RGCY | 3 cut(s) | 114, 319, 391 |
| CviKI_1 | RGCY | 3 cut(s) | 114, 319, 391 |
| DdeI | CTNAG | 2 cut(s) | 68, 143 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 71, 385 |
| EcoRI | GAATTC | 1 cut(s) | 374 |
| EcoRII | CCWGG | 1 cut(s) | 182 |
| FaeI | CATG | 2 cut(s) | 152, 170 |
| FaiI | YATR | 9 cut(s) | 132, 150, 168, 174, 240, 242, 258, 325, 384 |
| FatI | CATG | 2 cut(s) | 148, 166 |
| FokI | GGATG | 3 cut(s) | 199, 205, 257 |
| FspBI | CTAG | 1 cut(s) | 59 |
| HaeIII | GGCC | 2 cut(s) | 114, 319 |
| Hin1II | CATG | 2 cut(s) | 152, 170 |
| HinfI | GANTC | 4 cut(s) | 5, 44, 139, 298 |
| HphI | GGTGA | 3 cut(s) | 233, 349, 370 |
| Hpy188I | TCNGA | 2 cut(s) | 144, 297 |
| HpyAV | CCTTC | 3 cut(s) | 94, 126, 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 337 |
| HpyCH4V | TGCA | 3 cut(s) | 106, 130, 327 |
| HpyF3I | CTNAG | 2 cut(s) | 68, 143 |
| Hsp92II | CATG | 2 cut(s) | 152, 170 |
| LpnPI | CCDG | 7 cut(s) | 18, 77, 92, 145, 169, 196, 313 |
| LweI | GCATC | 2 cut(s) | 177, 298 |
| MaeI | CTAG | 1 cut(s) | 59 |
| MboII | GAAGA | 1 cut(s) | 343 |
| MfeI | CAATTG | 1 cut(s) | 21 |
| MluCI | AATT | 7 cut(s) | 21, 216, 235, 344, 354, 374, 398 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| MnlI | CCTC | 2 cut(s) | 130, 138 |
| MroXI | GAANNNNTTC | 1 cut(s) | 9 |
| MseI | TTAA | 2 cut(s) | 15, 342 |
| MspR9I | CCNGG | 1 cut(s) | 184 |
| MunI | CAATTG | 1 cut(s) | 21 |
| MvaI | CCWGG | 1 cut(s) | 184 |
| NlaIII | CATG | 2 cut(s) | 152, 170 |
| NlaIV | GGNNCC | 1 cut(s) | 320 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PdmI | GAANNNNTTC | 1 cut(s) | 9 |
| PfeI | GAWTC | 3 cut(s) | 5, 139, 298 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| Psp6I | CCWGG | 1 cut(s) | 182 |
| PspGI | CCWGG | 1 cut(s) | 182 |
| PspN4I | GGNNCC | 1 cut(s) | 320 |
| PspPI | GGNCC | 2 cut(s) | 113, 318 |
| SaqAI | TTAA | 2 cut(s) | 15, 342 |
| Sau96I | GGNCC | 2 cut(s) | 113, 318 |
| SchI | GAGTC | 1 cut(s) | 38 |
| ScrFI | CCNGG | 1 cut(s) | 184 |
| SetI | ASST | 5 cut(s) | 69, 105, 111, 383, 397 |
| SfaNI | GCATC | 2 cut(s) | 177, 298 |
| Sse9I | AATT | 7 cut(s) | 21, 216, 235, 344, 354, 374, 398 |
| SsiI | CCGC | 1 cut(s) | 190 |
| SspMI | CTAG | 1 cut(s) | 59 |
| StyD4I | CCNGG | 1 cut(s) | 182 |
| TaaI | ACNGT | 1 cut(s) | 337 |
| TasI | AATT | 7 cut(s) | 21, 216, 235, 344, 354, 374, 398 |
| TfiI | GAWTC | 3 cut(s) | 5, 139, 298 |
| Tru1I | TTAA | 2 cut(s) | 15, 342 |
| Tru9I | TTAA | 2 cut(s) | 15, 342 |
| TspDTI | ATGAA | 4 cut(s) | 155, 257, 366, 399 |
| TspGWI | ACGGA | 1 cut(s) | 278 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 71, 385 |
| XapI | RAATTY | 3 cut(s) | 344, 374, 398 |
| XceI | RCATGY | 1 cut(s) | 152 |
| XmnI | GAANNNNTTC | 1 cut(s) | 9 |
| XspI | CTAG | 1 cut(s) | 59 |