ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 165 |
| AccBSI | CCGCTC | 1 cut(s) | 413 |
| AciI | CCGC | 1 cut(s) | 411 |
| AclWI | GGATC | 4 cut(s) | 15, 403, 428, 441 |
| AcoI | YGGCCR | 1 cut(s) | 386 |
| AcyI | GRCGYC | 1 cut(s) | 222 |
| AfaI | GTAC | 1 cut(s) | 35 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 71, 443, 534, 535 |
| AgsI | TTSAA | 3 cut(s) | 209, 560, 709 |
| AjiI | CACGTC | 1 cut(s) | 4 |
| AluBI | AGCT | 2 cut(s) | 161, 261 |
| AluI | AGCT | 2 cut(s) | 161, 261 |
| AlwI | GGATC | 4 cut(s) | 15, 403, 428, 441 |
| AoxI | GGCC | 1 cut(s) | 386 |
| ApeKI | GCWGC | 2 cut(s) | 158, 665 |
| AspLEI | GCGC | 1 cut(s) | 508 |
| AspS9I | GGNCC | 1 cut(s) | 62 |
| AsuC2I | CCSGG | 4 cut(s) | 111, 390, 438, 622 |
| AvaII | GGWCC | 1 cut(s) | 62 |
| BaeGI | GKGCMC | 1 cut(s) | 552 |
| BamHI | GGATCC | 1 cut(s) | 433 |
| BanII | GRGCYC | 2 cut(s) | 26, 529 |
| BauI | CACGAG | 2 cut(s) | 306, 551 |
| BbvI | GCAGC | 2 cut(s) | 170, 652 |
| BccI | CCATC | 5 cut(s) | 32, 267, 378, 512, 677 |
| BcnI | CCSGG | 4 cut(s) | 111, 390, 438, 622 |
| BfoI | RGCGCY | 1 cut(s) | 509 |
| BisI | GCNGC | 2 cut(s) | 159, 666 |
| BlsI | GCNGC | 2 cut(s) | 160, 667 |
| Bme1390I | CCNGG | 4 cut(s) | 111, 390, 438, 622 |
| Bme18I | GGWCC | 1 cut(s) | 62 |
| BmgBI | CACGTC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 62 |
| BmiI | GGNNCC | 2 cut(s) | 409, 435 |
| BmrFI | CCNGG | 4 cut(s) | 111, 390, 438, 622 |
| BpuEI | CTTGAG | 1 cut(s) | 680 |
| BpuMI | CCSGG | 4 cut(s) | 111, 390, 438, 622 |
| BsaBI | GATNNNNATC | 1 cut(s) | 105 |
| BsaHI | GRCGYC | 1 cut(s) | 222 |
| BsaJI | CCNNGG | 1 cut(s) | 342 |
| BsaWI | WCCGGW | 2 cut(s) | 316, 477 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 33, 46, 63, 76 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 71, 443, 534, 535 |
| Bse1I | ACTGG | 2 cut(s) | 76, 423 |
| Bse8I | GATNNNNATC | 1 cut(s) | 105 |
| BseDI | CCNNGG | 1 cut(s) | 342 |
| BseGI | GGATG | 2 cut(s) | 106, 523 |
| BseJI | GATNNNNATC | 1 cut(s) | 105 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 71, 443, 534, 535 |
| BseNI | ACTGG | 2 cut(s) | 76, 423 |
| BseSI | GKGCMC | 1 cut(s) | 552 |
| BseXI | GCAGC | 2 cut(s) | 170, 652 |
| BseYI | CCCAGC | 1 cut(s) | 197 |
| BshFI | GGCC | 1 cut(s) | 388 |
| BsiSI | CCGG | 7 cut(s) | 65, 111, 317, 389, 437, 478, 622 |
| BslFI | GGGAC | 1 cut(s) | 255 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 71, 443, 534, 535 |
| BsmFI | GGGAC | 1 cut(s) | 255 |
| BsmI | GAATGC | 1 cut(s) | 448 |
| BsnI | GGCC | 1 cut(s) | 388 |
| Bsp1286I | GDGCHC | 3 cut(s) | 26, 529, 552 |
| Bsp143I | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| BspACI | CCGC | 1 cut(s) | 411 |
| BspANI | GGCC | 1 cut(s) | 388 |
| BspLI | GGNNCC | 2 cut(s) | 409, 435 |
| BspPI | GGATC | 4 cut(s) | 15, 403, 428, 441 |
| BspQI | GCTCTTC | 1 cut(s) | 517 |
| BsrBI | CCGCTC | 1 cut(s) | 413 |
| BsrI | ACTGG | 2 cut(s) | 76, 423 |
| BssECI | CCNNGG | 1 cut(s) | 342 |
| BssMI | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| BssNI | GRCGYC | 1 cut(s) | 222 |
| BssSI | CACGAG | 2 cut(s) | 306, 551 |
| Bst2BI | CACGAG | 2 cut(s) | 306, 551 |
| Bst4CI | ACNGT | 1 cut(s) | 616 |
| Bst6I | CTCTTC | 2 cut(s) | 40, 517 |
| BstACI | GRCGYC | 1 cut(s) | 222 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 366 |
| BstC8I | GCNNGC | 1 cut(s) | 380 |
| BstDSI | CCRYGG | 1 cut(s) | 342 |
| BstEII | GGTNACC | 1 cut(s) | 616 |
| BstF5I | GGATG | 2 cut(s) | 106, 523 |
| BstH2I | RGCGCY | 1 cut(s) | 509 |
| BstHHI | GCGC | 1 cut(s) | 508 |
| BstKTI | GATC | 5 cut(s) | 10, 103, 125, 398, 436 |
| BstMBI | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 74, 366, 375, 419 |
| BstPI | GGTNACC | 1 cut(s) | 616 |
| BstSCI | CCNGG | 4 cut(s) | 109, 388, 436, 620 |
| BstSLI | GKGCMC | 1 cut(s) | 552 |
| BstV1I | GCAGC | 2 cut(s) | 170, 652 |
| BstX2I | RGATCY | 3 cut(s) | 7, 395, 433 |
| BstYI | RGATCY | 3 cut(s) | 7, 395, 433 |
| BsuRI | GGCC | 1 cut(s) | 388 |
| BtgI | CCRYGG | 1 cut(s) | 342 |
| BtgZI | GCGATG | 1 cut(s) | 397 |
| BtrI | CACGTC | 1 cut(s) | 4 |
| BtsCI | GGATG | 2 cut(s) | 106, 523 |
| Cac8I | GCNNGC | 1 cut(s) | 380 |
| CfoI | GCGC | 1 cut(s) | 508 |
| Cfr13I | GGNCC | 1 cut(s) | 62 |
| CseI | GACGC | 1 cut(s) | 230 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviAII | CATG | 1 cut(s) | 534 |
| CviJI | RGCY | 9 cut(s) | 24, 119, 161, 213, 261, 388, 441, 527, 665 |
| CviKI_1 | RGCY | 9 cut(s) | 24, 119, 161, 213, 261, 388, 441, 527, 665 |
| CviQI | GTAC | 1 cut(s) | 34 |
| DpnI | GATC | 5 cut(s) | 9, 102, 124, 397, 435 |
| DpnII | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| EaeI | YGGCCR | 1 cut(s) | 386 |
| Eam1104I | CTCTTC | 2 cut(s) | 40, 517 |
| EarI | CTCTTC | 2 cut(s) | 40, 517 |
| Eco24I | GRGCYC | 2 cut(s) | 26, 529 |
| Eco47I | GGWCC | 1 cut(s) | 62 |
| Eco91I | GGTNACC | 1 cut(s) | 616 |
| EcoO65I | GGTNACC | 1 cut(s) | 616 |
| EcoT38I | GRGCYC | 2 cut(s) | 26, 529 |
| FaeI | CATG | 1 cut(s) | 537 |
| FaqI | GGGAC | 1 cut(s) | 255 |
| FatI | CATG | 1 cut(s) | 533 |
| Fnu4HI | GCNGC | 2 cut(s) | 159, 666 |
| FokI | GGATG | 2 cut(s) | 93, 530 |
| FriOI | GRGCYC | 2 cut(s) | 26, 529 |
| Fsp4HI | GCNGC | 2 cut(s) | 159, 666 |
| GlaI | GCGC | 1 cut(s) | 507 |
| GluI | GCNGC | 2 cut(s) | 159, 666 |
| GsaI | CCCAGC | 1 cut(s) | 201 |
| HaeII | RGCGCY | 1 cut(s) | 509 |
| HaeIII | GGCC | 1 cut(s) | 388 |
| HapII | CCGG | 7 cut(s) | 65, 111, 317, 389, 437, 478, 622 |
| HgaI | GACGC | 1 cut(s) | 230 |
| HhaI | GCGC | 1 cut(s) | 508 |
| Hin1I | GRCGYC | 1 cut(s) | 222 |
| Hin1II | CATG | 1 cut(s) | 537 |
| Hin6I | GCGC | 1 cut(s) | 506 |
| HinP1I | GCGC | 1 cut(s) | 506 |
| HinfI | GANTC | 3 cut(s) | 320, 568, 705 |
| HpaII | CCGG | 7 cut(s) | 65, 111, 317, 389, 437, 478, 622 |
| Hpy166II | GTNNAC | 2 cut(s) | 220, 301 |
| Hpy188I | TCNGA | 2 cut(s) | 83, 148 |
| Hpy188III | TCNNGA | 3 cut(s) | 270, 306, 515 |
| Hpy8I | GTNNAC | 2 cut(s) | 220, 301 |
| HpyAV | CCTTC | 1 cut(s) | 203 |
| HpyCH4III | ACNGT | 1 cut(s) | 616 |
| HpyCH4IV | ACGT | 1 cut(s) | 3 |
| HpyCH4V | TGCA | 3 cut(s) | 13, 378, 725 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 74, 366, 375, 419 |
| HpySE526I | ACGT | 1 cut(s) | 3 |
| Hsp92I | GRCGYC | 1 cut(s) | 222 |
| Hsp92II | CATG | 1 cut(s) | 537 |
| HspAI | GCGC | 1 cut(s) | 506 |
| Kzo9I | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| LguI | GCTCTTC | 1 cut(s) | 517 |
| LmnI | GCTCC | 1 cut(s) | 277 |
| Lsp1109I | GCAGC | 2 cut(s) | 170, 652 |
| MaeII | ACGT | 1 cut(s) | 3 |
| MaeIII | GTNAC | 3 cut(s) | 371, 616, 624 |
| MalI | GATC | 5 cut(s) | 9, 102, 124, 397, 435 |
| MbiI | CCGCTC | 1 cut(s) | 413 |
| MboI | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| MboII | GAAGA | 4 cut(s) | 57, 239, 534, 572 |
| MflI | RGATCY | 3 cut(s) | 7, 395, 433 |
| MhlI | GDGCHC | 3 cut(s) | 26, 529, 552 |
| MlyI | GAGTC | 1 cut(s) | 577 |
| MseI | TTAA | 2 cut(s) | 352, 469 |
| MslI | CAYNNNNRTG | 1 cut(s) | 310 |
| MspA1I | CMGCKG | 1 cut(s) | 261 |
| MspI | CCGG | 7 cut(s) | 65, 111, 317, 389, 437, 478, 622 |
| MspR9I | CCNGG | 4 cut(s) | 111, 390, 438, 622 |
| Mva1269I | GAATGC | 1 cut(s) | 448 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 74, 366, 375, 419 |
| NciI | CCSGG | 4 cut(s) | 111, 390, 438, 622 |
| NdeII | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| NlaIII | CATG | 1 cut(s) | 537 |
| NlaIV | GGNNCC | 2 cut(s) | 409, 435 |
| NmuCI | GTSAC | 2 cut(s) | 371, 624 |
| PciSI | GCTCTTC | 1 cut(s) | 517 |
| PctI | GAATGC | 1 cut(s) | 448 |
| PfeI | GAWTC | 2 cut(s) | 320, 705 |
| PfoI | TCCNGGA | 1 cut(s) | 109 |
| PkrI | GCNGC | 2 cut(s) | 160, 667 |
| PleI | GAGTC | 1 cut(s) | 576 |
| PpsI | GAGTC | 1 cut(s) | 576 |
| PsiI | TTATAA | 1 cut(s) | 165 |
| PspEI | GGTNACC | 1 cut(s) | 616 |
| PspFI | CCCAGC | 1 cut(s) | 197 |
| PspN4I | GGNNCC | 2 cut(s) | 409, 435 |
| PspPI | GGNCC | 1 cut(s) | 62 |
| PsuI | RGATCY | 3 cut(s) | 7, 395, 433 |
| PvuII | CAGCTG | 1 cut(s) | 261 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| RseI | CAYNNNNRTG | 1 cut(s) | 310 |
| SapI | GCTCTTC | 1 cut(s) | 517 |
| SaqAI | TTAA | 2 cut(s) | 352, 469 |
| SatI | GCNGC | 2 cut(s) | 159, 666 |
| Sau3AI | GATC | 5 cut(s) | 7, 100, 122, 395, 433 |
| Sau96I | GGNCC | 1 cut(s) | 62 |
| SchI | GAGTC | 1 cut(s) | 577 |
| ScrFI | CCNGG | 4 cut(s) | 111, 390, 438, 622 |
| SduI | GDGCHC | 3 cut(s) | 26, 529, 552 |
| SetI | ASST | 7 cut(s) | 6, 19, 59, 144, 163, 263, 593 |
| SinI | GGWCC | 1 cut(s) | 62 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 310 |
| SmlI | CTYRAG | 1 cut(s) | 659 |
| SmoI | CTYRAG | 1 cut(s) | 659 |
| SsiI | CCGC | 1 cut(s) | 411 |
| StyD4I | CCNGG | 4 cut(s) | 109, 388, 436, 620 |
| TaaI | ACNGT | 1 cut(s) | 616 |
| TaiI | ACGT | 1 cut(s) | 6 |
| TaqI | TCGA | 2 cut(s) | 249, 745 |
| TfiI | GAWTC | 2 cut(s) | 320, 705 |
| Tru1I | TTAA | 2 cut(s) | 352, 469 |
| Tru9I | TTAA | 2 cut(s) | 352, 469 |
| TseFI | GTSAC | 2 cut(s) | 371, 624 |
| TseI | GCWGC | 2 cut(s) | 158, 665 |
| Tsp45I | GTSAC | 2 cut(s) | 371, 624 |
| TspDTI | ATGAA | 1 cut(s) | 522 |
| TspGWI | ACGGA | 1 cut(s) | 331 |
| VpaK11BI | GGWCC | 1 cut(s) | 62 |