Domain of unknown function (DUF4283)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 399 |
| AarI | CACCTGC | 1 cut(s) | 1270 |
| Acc16I | TGCGCA | 1 cut(s) | 1410 |
| Acc36I | ACCTGC | 1 cut(s) | 1270 |
| AccB1I | GGYRCC | 2 cut(s) | 544, 1258 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 299 |
| AccII | CGCG | 1 cut(s) | 314 |
| AciI | CCGC | 5 cut(s) | 312, 314, 444, 461, 533 |
| AclWI | GGATC | 4 cut(s) | 230, 443, 805, 818 |
| AcoI | YGGCCR | 1 cut(s) | 1167 |
| AcvI | CACGTG | 1 cut(s) | 1369 |
| AdeI | CACNNNGTG | 2 cut(s) | 523, 804 |
| AfaI | GTAC | 2 cut(s) | 335, 1285 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 46, 299, 660, 1001, 1015, 1556 |
| AflIII | ACRYGT | 1 cut(s) | 1366 |
| AgsI | TTSAA | 4 cut(s) | 57, 883, 1015, 1478 |
| AjnI | CCWGG | 5 cut(s) | 230, 755, 846, 994, 1133 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 917, 949 |
| AleI | CACNNNNGTG | 1 cut(s) | 155 |
| Alw21I | GWGCWC | 3 cut(s) | 152, 671, 894 |
| Alw26I | GTCTC | 2 cut(s) | 279, 1277 |
| AlwI | GGATC | 4 cut(s) | 230, 443, 805, 818 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 756 |
| Ama87I | CYCGRG | 3 cut(s) | 832, 841, 893 |
| AoxI | GGCC | 4 cut(s) | 417, 844, 1167, 1195 |
| ApeKI | GCWGC | 4 cut(s) | 75, 78, 469, 1126 |
| AspA2I | CCTAGG | 1 cut(s) | 133 |
| AspLEI | GCGC | 1 cut(s) | 1411 |
| AspS9I | GGNCC | 4 cut(s) | 137, 584, 844, 905 |
| AsuC2I | CCSGG | 2 cut(s) | 1395, 1468 |
| AsuHPI | GGTGA | 3 cut(s) | 560, 649, 1106 |
| AsuNHI | GCTAGC | 1 cut(s) | 205 |
| AvaI | CYCGRG | 3 cut(s) | 832, 841, 893 |
| AvaII | GGWCC | 3 cut(s) | 137, 584, 905 |
| AvrII | CCTAGG | 1 cut(s) | 133 |
| BaeGI | GKGCMC | 1 cut(s) | 1473 |
| BalI | TGGCCA | 1 cut(s) | 1169 |
| BamHI | GGATCC | 1 cut(s) | 810 |
| BanI | GGYRCC | 2 cut(s) | 544, 1258 |
| BanII | GRGCYC | 1 cut(s) | 894 |
| BauI | CACGAG | 1 cut(s) | 1584 |
| BbrPI | CACGTG | 1 cut(s) | 1369 |
| BbsI | GAAGAC | 1 cut(s) | 32 |
| Bbv12I | GWGCWC | 3 cut(s) | 152, 671, 894 |
| BbvI | GCAGC | 4 cut(s) | 65, 87, 456, 1138 |
| BccI | CCATC | 6 cut(s) | 173, 535, 1025, 1099, 1295, 1345 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 332, 366, 1019, 1053 |
| BciT130I | CCWGG | 5 cut(s) | 232, 757, 848, 996, 1135 |
| BclI | TGATCA | 1 cut(s) | 1491 |
| BcnI | CCSGG | 2 cut(s) | 1395, 1468 |
| BcoDI | GTCTC | 2 cut(s) | 279, 1277 |
| BfaI | CTAG | 6 cut(s) | 134, 192, 206, 632, 1154, 1556 |
| BfuAI | ACCTGC | 1 cut(s) | 1270 |
| BisI | GCNGC | 4 cut(s) | 76, 79, 470, 1127 |
| BlnI | CCTAGG | 1 cut(s) | 133 |
| BlsI | GCNGC | 4 cut(s) | 77, 80, 471, 1128 |
| Bme1390I | CCNGG | 7 cut(s) | 232, 757, 848, 996, 1135, 1395, 1468 |
| Bme18I | GGWCC | 3 cut(s) | 137, 584, 905 |
| BmeT110I | CYCGRG | 3 cut(s) | 832, 841, 893 |
| BmgT120I | GGNCC | 4 cut(s) | 137, 584, 844, 905 |
| BmiI | GGNNCC | 9 cut(s) | 546, 585, 586, 761, 773, 812, 906, 1260, 1392 |
| BmrFI | CCNGG | 7 cut(s) | 232, 757, 848, 996, 1135, 1395, 1468 |
| BmrI | ACTGGG | 2 cut(s) | 35, 687 |
| BmsI | GCATC | 4 cut(s) | 504, 939, 1381, 1536 |
| BmtI | GCTAGC | 1 cut(s) | 209 |
| BmuI | ACTGGG | 2 cut(s) | 35, 687 |
| BpiI | GAAGAC | 1 cut(s) | 32 |
| BpuMI | CCSGG | 2 cut(s) | 1395, 1468 |
| BsaAI | YACGTR | 1 cut(s) | 1369 |
| BsaJI | CCNNGG | 3 cut(s) | 133, 312, 1133 |
| BsaWI | WCCGGW | 1 cut(s) | 557 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1551, 1581 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 46, 299, 660, 1001, 1015, 1556 |
| Bse118I | RCCGGY | 2 cut(s) | 547, 1025 |
| Bse1I | ACTGG | 5 cut(s) | 41, 596, 682, 1041, 1115 |
| Bse3DI | GCAATG | 4 cut(s) | 190, 303, 348, 464 |
| BseBI | CCWGG | 5 cut(s) | 232, 757, 848, 996, 1135 |
| BseDI | CCNNGG | 3 cut(s) | 133, 312, 1133 |
| BseGI | GGATG | 8 cut(s) | 110, 322, 402, 519, 669, 972, 1304, 1372 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 46, 299, 660, 1001, 1015, 1556 |
| BseMI | GCAATG | 4 cut(s) | 190, 303, 348, 464 |
| BseMII | CTCAG | 3 cut(s) | 12, 912, 1284 |
| BseNI | ACTGG | 5 cut(s) | 41, 596, 682, 1041, 1115 |
| BseSI | GKGCMC | 1 cut(s) | 1473 |
| BseXI | GCAGC | 4 cut(s) | 65, 87, 456, 1138 |
| BseYI | CCCAGC | 2 cut(s) | 999, 1520 |
| Bsh1236I | CGCG | 1 cut(s) | 314 |
| BshFI | GGCC | 4 cut(s) | 419, 846, 1169, 1197 |
| BshNI | GGYRCC | 2 cut(s) | 544, 1258 |
| BsiHKAI | GWGCWC | 3 cut(s) | 152, 671, 894 |
| BsiHKCI | CYCGRG | 3 cut(s) | 832, 841, 893 |
| BsiSI | CCGG | 6 cut(s) | 196, 548, 558, 1026, 1395, 1467 |
| BslFI | GGGAC | 4 cut(s) | 570, 694, 1226, 1588 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 46, 299, 660, 1001, 1015, 1556 |
| BsmAI | GTCTC | 2 cut(s) | 279, 1277 |
| BsmFI | GGGAC | 4 cut(s) | 570, 694, 1226, 1588 |
| BsnI | GGCC | 4 cut(s) | 419, 846, 1169, 1197 |
| BsoBI | CYCGRG | 3 cut(s) | 832, 841, 893 |
| Bsp1286I | GDGCHC | 4 cut(s) | 152, 671, 894, 1473 |
| Bsp1407I | TGTACA | 1 cut(s) | 333 |
| Bsp143I | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| BspACI | CCGC | 5 cut(s) | 312, 314, 444, 461, 533 |
| BspANI | GGCC | 4 cut(s) | 419, 846, 1169, 1197 |
| BspCNI | CTCAG | 3 cut(s) | 13, 913, 1285 |
| BspFNI | CGCG | 1 cut(s) | 314 |
| BspLI | GGNNCC | 9 cut(s) | 546, 585, 586, 761, 773, 812, 906, 1260, 1392 |
| BspMI | ACCTGC | 1 cut(s) | 1270 |
| BspOI | GCTAGC | 1 cut(s) | 209 |
| BspPI | GGATC | 4 cut(s) | 230, 443, 805, 818 |
| BspQI | GCTCTTC | 1 cut(s) | 710 |
| BspT107I | GGYRCC | 2 cut(s) | 544, 1258 |
| BsrDI | GCAATG | 4 cut(s) | 190, 303, 348, 464 |
| BsrFI | RCCGGY | 2 cut(s) | 547, 1025 |
| BsrGI | TGTACA | 1 cut(s) | 333 |
| BsrI | ACTGG | 5 cut(s) | 41, 596, 682, 1041, 1115 |
| BssAI | RCCGGY | 2 cut(s) | 547, 1025 |
| BssECI | CCNNGG | 3 cut(s) | 133, 312, 1133 |
| BssMI | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| BssSI | CACGAG | 1 cut(s) | 1584 |
| BssT1I | CCWWGG | 1 cut(s) | 133 |
| Bst2BI | CACGAG | 1 cut(s) | 1584 |
| Bst2UI | CCWGG | 5 cut(s) | 232, 757, 848, 996, 1135 |
| Bst4CI | ACNGT | 3 cut(s) | 8, 435, 1453 |
| Bst6I | CTCTTC | 4 cut(s) | 293, 710, 862, 1016 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 615, 1378 |
| BstAUI | TGTACA | 1 cut(s) | 333 |
| BstBAI | YACGTR | 1 cut(s) | 1369 |
| BstC8I | GCNNGC | 5 cut(s) | 207, 216, 1023, 1027, 1124 |
| BstDEI | CTNAG | 3 cut(s) | 21, 921, 1293 |
| BstDSI | CCRYGG | 1 cut(s) | 312 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1013, 1554 |
| BstF5I | GGATG | 8 cut(s) | 110, 322, 402, 519, 669, 972, 1304, 1372 |
| BstFNI | CGCG | 1 cut(s) | 314 |
| BstHHI | GCGC | 1 cut(s) | 1411 |
| BstKTI | GATC | 7 cut(s) | 225, 451, 705, 744, 813, 1190, 1494 |
| BstMAI | GTCTC | 2 cut(s) | 279, 1277 |
| BstMBI | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| BstNI | CCWGG | 5 cut(s) | 232, 757, 848, 996, 1135 |
| BstNSI | RCATGY | 2 cut(s) | 205, 511 |
| BstSCI | CCNGG | 7 cut(s) | 230, 755, 846, 994, 1133, 1393, 1466 |
| BstSLI | GKGCMC | 1 cut(s) | 1473 |
| BstUI | CGCG | 1 cut(s) | 314 |
| BstV1I | GCAGC | 4 cut(s) | 65, 87, 456, 1138 |
| BstV2I | GAAGAC | 1 cut(s) | 32 |
| BstX2I | RGATCY | 3 cut(s) | 222, 448, 810 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1048 |
| BstYI | RGATCY | 3 cut(s) | 222, 448, 810 |
| BsuRI | GGCC | 4 cut(s) | 419, 846, 1169, 1197 |
| BtgI | CCRYGG | 1 cut(s) | 312 |
| BtgZI | GCGATG | 1 cut(s) | 1044 |
| BtsCI | GGATG | 8 cut(s) | 110, 322, 402, 519, 669, 972, 1304, 1372 |
| BtsI | GCAGTG | 2 cut(s) | 1317, 1376 |
| BtsIMutI | CAGTG | 6 cut(s) | 431, 675, 1048, 1290, 1317, 1376 |
| BveI | ACCTGC | 1 cut(s) | 1270 |
| Cac8I | GCNNGC | 5 cut(s) | 207, 216, 1023, 1027, 1124 |
| CaiI | CAGNNNCTG | 1 cut(s) | 756 |
| CfoI | GCGC | 1 cut(s) | 1411 |
| Cfr10I | RCCGGY | 2 cut(s) | 547, 1025 |
| Cfr13I | GGNCC | 4 cut(s) | 137, 584, 844, 905 |
| Cfr42I | CCGCGG | 1 cut(s) | 315 |
| CseI | GACGC | 1 cut(s) | 1333 |
| CsiI | ACCWGGT | 1 cut(s) | 755 |
| Csp6I | GTAC | 2 cut(s) | 334, 1284 |
| CviAII | CATG | 4 cut(s) | 202, 337, 508, 1495 |
| CviQI | GTAC | 2 cut(s) | 334, 1284 |
| DdeI | CTNAG | 3 cut(s) | 21, 921, 1293 |
| DpnI | GATC | 7 cut(s) | 224, 450, 704, 743, 812, 1189, 1493 |
| DpnII | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| DraIII | CACNNNGTG | 2 cut(s) | 523, 804 |
| EaeI | YGGCCR | 1 cut(s) | 1167 |
| Eam1104I | CTCTTC | 4 cut(s) | 293, 710, 862, 1016 |
| EarI | CTCTTC | 4 cut(s) | 293, 710, 862, 1016 |
| EciI | GGCGGA | 1 cut(s) | 450 |
| Ecl136II | GAGCTC | 1 cut(s) | 892 |
| Eco130I | CCWWGG | 1 cut(s) | 133 |
| Eco24I | GRGCYC | 1 cut(s) | 894 |
| Eco47I | GGWCC | 3 cut(s) | 137, 584, 905 |
| Eco53kI | GAGCTC | 1 cut(s) | 892 |
| Eco72I | CACGTG | 1 cut(s) | 1369 |
| Eco88I | CYCGRG | 3 cut(s) | 832, 841, 893 |
| EcoICRI | GAGCTC | 1 cut(s) | 892 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1013, 1554 |
| EcoO109I | RGGNCCY | 2 cut(s) | 137, 584 |
| EcoRII | CCWGG | 5 cut(s) | 230, 755, 846, 994, 1133 |
| EcoT14I | CCWWGG | 1 cut(s) | 133 |
| EcoT38I | GRGCYC | 1 cut(s) | 894 |
| ErhI | CCWWGG | 1 cut(s) | 133 |
| FaeI | CATG | 4 cut(s) | 205, 340, 511, 1498 |
| FaqI | GGGAC | 4 cut(s) | 570, 694, 1226, 1588 |
| FatI | CATG | 4 cut(s) | 201, 336, 507, 1494 |
| FbaI | TGATCA | 1 cut(s) | 1491 |
| Fnu4HI | GCNGC | 4 cut(s) | 76, 79, 470, 1127 |
| FokI | GGATG | 8 cut(s) | 97, 329, 389, 526, 676, 979, 1291, 1359 |
| FriOI | GRGCYC | 1 cut(s) | 894 |
| Fsp4HI | GCNGC | 4 cut(s) | 76, 79, 470, 1127 |
| FspBI | CTAG | 6 cut(s) | 134, 192, 206, 632, 1154, 1556 |
| FspI | TGCGCA | 1 cut(s) | 1410 |
| GlaI | GCGC | 1 cut(s) | 1410 |
| GluI | GCNGC | 4 cut(s) | 76, 79, 470, 1127 |
| GsaI | CCCAGC | 2 cut(s) | 1003, 1524 |
| HaeIII | GGCC | 4 cut(s) | 419, 846, 1169, 1197 |
| HapII | CCGG | 6 cut(s) | 196, 548, 558, 1026, 1395, 1467 |
| HgaI | GACGC | 1 cut(s) | 1333 |
| HhaI | GCGC | 1 cut(s) | 1411 |
| Hin1II | CATG | 4 cut(s) | 205, 340, 511, 1498 |
| Hin6I | GCGC | 1 cut(s) | 1409 |
| HinP1I | GCGC | 1 cut(s) | 1409 |
| HindIII | AAGCTT | 1 cut(s) | 367 |
| HinfI | GANTC | 6 cut(s) | 457, 561, 628, 691, 1005, 1182 |
| HpaII | CCGG | 6 cut(s) | 196, 548, 558, 1026, 1395, 1467 |
| HphI | GGTGA | 3 cut(s) | 560, 649, 1106 |
| Hpy188I | TCNGA | 6 cut(s) | 456, 579, 707, 1187, 1350, 1484 |
| Hpy188III | TCNNGA | 4 cut(s) | 728, 834, 895, 1573 |
| Hpy99I | CGWCG | 2 cut(s) | 583, 1327 |
| HpyAV | CCTTC | 2 cut(s) | 575, 786 |
| HpyCH4III | ACNGT | 3 cut(s) | 8, 435, 1453 |
| HpyCH4IV | ACGT | 3 cut(s) | 522, 1368, 1473 |
| HpyCH4V | TGCA | 7 cut(s) | 326, 517, 618, 1122, 1202, 1372, 1583 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 921, 1293 |
| HpySE526I | ACGT | 3 cut(s) | 522, 1368, 1473 |
| Hsp92II | CATG | 4 cut(s) | 205, 340, 511, 1498 |
| HspAI | GCGC | 1 cut(s) | 1409 |
| KflI | GGGWCCC | 1 cut(s) | 584 |
| KroI | GCCGGC | 1 cut(s) | 1025 |
| KroNI | GCCGGC | 1 cut(s) | 1027 |
| Ksp22I | TGATCA | 1 cut(s) | 1491 |
| KspI | CCGCGG | 1 cut(s) | 315 |
| Kzo9I | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| LguI | GCTCTTC | 1 cut(s) | 710 |
| LmnI | GCTCC | 1 cut(s) | 1559 |
| Lsp1109I | GCAGC | 4 cut(s) | 65, 87, 456, 1138 |
| LweI | GCATC | 4 cut(s) | 504, 939, 1381, 1536 |
| MabI | ACCWGGT | 1 cut(s) | 755 |
| MaeI | CTAG | 6 cut(s) | 134, 192, 206, 632, 1154, 1556 |
| MaeII | ACGT | 3 cut(s) | 522, 1368, 1473 |
| MaeIII | GTNAC | 2 cut(s) | 187, 1149 |
| MalI | GATC | 7 cut(s) | 224, 450, 704, 743, 812, 1189, 1493 |
| MboI | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| MboII | GAAGA | 8 cut(s) | 37, 217, 280, 727, 787, 849, 895, 1003 |
| MflI | RGATCY | 3 cut(s) | 222, 448, 810 |
| MhlI | GDGCHC | 4 cut(s) | 152, 671, 894, 1473 |
| MlsI | TGGCCA | 1 cut(s) | 1169 |
| MluCI | AATT | 2 cut(s) | 52, 1344 |
| MluNI | TGGCCA | 1 cut(s) | 1169 |
| MlyI | GAGTC | 2 cut(s) | 1014, 1191 |
| MmeI | TCCRAC | 5 cut(s) | 138, 602, 1332, 1435, 1570 |
| Mox20I | TGGCCA | 1 cut(s) | 1169 |
| MroNI | GCCGGC | 1 cut(s) | 1025 |
| MscI | TGGCCA | 1 cut(s) | 1169 |
| MseI | TTAA | 3 cut(s) | 95, 422, 1511 |
| MslI | CAYNNNNRTG | 2 cut(s) | 155, 512 |
| Msp20I | TGGCCA | 1 cut(s) | 1169 |
| MspA1I | CMGCKG | 3 cut(s) | 78, 314, 533 |
| MspI | CCGG | 6 cut(s) | 196, 548, 558, 1026, 1395, 1467 |
| MspR9I | CCNGG | 7 cut(s) | 232, 757, 848, 996, 1135, 1395, 1468 |
| MvaI | CCWGG | 5 cut(s) | 232, 757, 848, 996, 1135 |
| MvnI | CGCG | 1 cut(s) | 314 |
| NaeI | GCCGGC | 1 cut(s) | 1027 |
| NciI | CCSGG | 2 cut(s) | 1395, 1468 |
| NdeII | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| NgoMIV | GCCGGC | 1 cut(s) | 1025 |
| NheI | GCTAGC | 1 cut(s) | 205 |
| NlaIII | CATG | 4 cut(s) | 205, 340, 511, 1498 |
| NlaIV | GGNNCC | 9 cut(s) | 546, 585, 586, 761, 773, 812, 906, 1260, 1392 |
| NmuCI | GTSAC | 1 cut(s) | 187 |
| NsbI | TGCGCA | 1 cut(s) | 1410 |
| NspI | RCATGY | 2 cut(s) | 205, 511 |
| OliI | CACNNNNGTG | 1 cut(s) | 155 |
| PaeR7I | CTCGAG | 2 cut(s) | 832, 893 |
| PaqCI | CACCTGC | 1 cut(s) | 1270 |
| PciSI | GCTCTTC | 1 cut(s) | 710 |
| PdiI | GCCGGC | 1 cut(s) | 1027 |
| PfeI | GAWTC | 4 cut(s) | 457, 561, 628, 691 |
| PflFI | GACNNNGTC | 1 cut(s) | 1181 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 299 |
| PfoI | TCCNGGA | 1 cut(s) | 1393 |
| PkrI | GCNGC | 4 cut(s) | 77, 80, 471, 1128 |
| PleI | GAGTC | 2 cut(s) | 1013, 1190 |
| PmaCI | CACGTG | 1 cut(s) | 1369 |
| PmlI | CACGTG | 1 cut(s) | 1369 |
| PpsI | GAGTC | 2 cut(s) | 1013, 1190 |
| Ppu21I | YACGTR | 1 cut(s) | 1369 |
| PpuMI | RGGWCCY | 2 cut(s) | 137, 584 |
| PsiI | TTATAA | 1 cut(s) | 399 |
| Psp124BI | GAGCTC | 1 cut(s) | 894 |
| Psp5II | RGGWCCY | 2 cut(s) | 137, 584 |
| Psp6I | CCWGG | 5 cut(s) | 230, 755, 846, 994, 1133 |
| PspCI | CACGTG | 1 cut(s) | 1369 |
| PspFI | CCCAGC | 2 cut(s) | 999, 1520 |
| PspGI | CCWGG | 5 cut(s) | 230, 755, 846, 994, 1133 |
| PspN4I | GGNNCC | 9 cut(s) | 546, 585, 586, 761, 773, 812, 906, 1260, 1392 |
| PspPI | GGNCC | 4 cut(s) | 137, 584, 844, 905 |
| PspPPI | RGGWCCY | 2 cut(s) | 137, 584 |
| PstNI | CAGNNNCTG | 1 cut(s) | 756 |
| PsuI | RGATCY | 3 cut(s) | 222, 448, 810 |
| PsyI | GACNNNGTC | 1 cut(s) | 1181 |
| PvuII | CAGCTG | 1 cut(s) | 78 |
| RsaI | GTAC | 2 cut(s) | 335, 1285 |
| RsaNI | GTAC | 2 cut(s) | 334, 1284 |
| RseI | CAYNNNNRTG | 2 cut(s) | 155, 512 |
| SacI | GAGCTC | 1 cut(s) | 894 |
| SacII | CCGCGG | 1 cut(s) | 315 |
| SapI | GCTCTTC | 1 cut(s) | 710 |
| SaqAI | TTAA | 3 cut(s) | 95, 422, 1511 |
| SatI | GCNGC | 4 cut(s) | 76, 79, 470, 1127 |
| Sau3AI | GATC | 7 cut(s) | 222, 448, 702, 741, 810, 1187, 1491 |
| Sau96I | GGNCC | 4 cut(s) | 137, 584, 844, 905 |
| SchI | GAGTC | 2 cut(s) | 1014, 1191 |
| ScrFI | CCNGG | 7 cut(s) | 232, 757, 848, 996, 1135, 1395, 1468 |
| SduI | GDGCHC | 4 cut(s) | 152, 671, 894, 1473 |
| SexAI | ACCWGGT | 1 cut(s) | 755 |
| SfaNI | GCATC | 4 cut(s) | 504, 939, 1381, 1536 |
| Sfr274I | CTCGAG | 2 cut(s) | 832, 893 |
| Sfr303I | CCGCGG | 1 cut(s) | 315 |
| SgrBI | CCGCGG | 1 cut(s) | 315 |
| SinI | GGWCC | 3 cut(s) | 137, 584, 905 |
| SlaI | CTCGAG | 2 cut(s) | 832, 893 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 155, 512 |
| SmlI | CTYRAG | 2 cut(s) | 832, 893 |
| SmoI | CTYRAG | 2 cut(s) | 832, 893 |
| Sse9I | AATT | 2 cut(s) | 52, 1344 |
| SsiI | CCGC | 5 cut(s) | 312, 314, 444, 461, 533 |
| SspMI | CTAG | 6 cut(s) | 134, 192, 206, 632, 1154, 1556 |
| SstI | GAGCTC | 1 cut(s) | 894 |
| StyD4I | CCNGG | 7 cut(s) | 230, 755, 846, 994, 1133, 1393, 1466 |
| StyI | CCWWGG | 1 cut(s) | 133 |
| TaaI | ACNGT | 3 cut(s) | 8, 435, 1453 |
| TaiI | ACGT | 3 cut(s) | 525, 1371, 1476 |
| TaqI | TCGA | 5 cut(s) | 177, 833, 867, 894, 1214 |
| TasI | AATT | 2 cut(s) | 52, 1344 |
| TatI | WGTACW | 1 cut(s) | 333 |
| TfiI | GAWTC | 4 cut(s) | 457, 561, 628, 691 |
| Tru1I | TTAA | 3 cut(s) | 95, 422, 1511 |
| Tru9I | TTAA | 3 cut(s) | 95, 422, 1511 |
| TscAI | CASTG | 6 cut(s) | 438, 682, 1048, 1297, 1324, 1383 |
| TseFI | GTSAC | 1 cut(s) | 187 |
| TseI | GCWGC | 4 cut(s) | 75, 78, 469, 1126 |
| Tsp45I | GTSAC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 1 cut(s) | 353 |
| TspGWI | ACGGA | 1 cut(s) | 1194 |
| TspRI | CASTG | 6 cut(s) | 438, 682, 1048, 1297, 1324, 1383 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1181 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 299 |
| VpaK11BI | GGWCC | 3 cut(s) | 137, 584, 905 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1013, 1554 |
| XceI | RCATGY | 2 cut(s) | 205, 511 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1048 |
| XhoI | CTCGAG | 2 cut(s) | 832, 893 |
| XmaJI | CCTAGG | 1 cut(s) | 133 |
| XspI | CTAG | 6 cut(s) | 134, 192, 206, 632, 1154, 1556 |