ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 241 |
| AclWI | GGATC | 2 cut(s) | 167, 180 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 299 |
| AgsI | TTSAA | 2 cut(s) | 44, 109 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 157, 189 |
| AluBI | AGCT | 1 cut(s) | 53 |
| AluI | AGCT | 1 cut(s) | 53 |
| Alw26I | GTCTC | 1 cut(s) | 265 |
| AlwI | GGATC | 2 cut(s) | 167, 180 |
| AoxI | GGCC | 1 cut(s) | 15 |
| ApaI | GGGCCC | 1 cut(s) | 19 |
| AspS9I | GGNCC | 2 cut(s) | 15, 16 |
| BaeGI | GKGCMC | 1 cut(s) | 19 |
| BamHI | GGATCC | 1 cut(s) | 172 |
| BanII | GRGCYC | 1 cut(s) | 19 |
| BccI | CCATC | 2 cut(s) | 155, 289 |
| BclI | TGATCA | 1 cut(s) | 130 |
| BcoDI | GTCTC | 1 cut(s) | 265 |
| BfuAI | ACCTGC | 1 cut(s) | 241 |
| BmgT120I | GGNCC | 2 cut(s) | 15, 16 |
| BmiI | GGNNCC | 2 cut(s) | 17, 174 |
| BmsI | GCATC | 1 cut(s) | 164 |
| BsaJI | CCNNGG | 1 cut(s) | 119 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 299 |
| BseDI | CCNNGG | 1 cut(s) | 119 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 299 |
| BseMII | CTCAG | 2 cut(s) | 212, 249 |
| BseSI | GKGCMC | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 17 |
| BslFI | GGGAC | 1 cut(s) | 295 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 299 |
| BsmAI | GTCTC | 1 cut(s) | 265 |
| BsmFI | GGGAC | 1 cut(s) | 295 |
| BsnI | GGCC | 1 cut(s) | 17 |
| Bsp120I | GGGCCC | 1 cut(s) | 15 |
| Bsp1286I | GDGCHC | 1 cut(s) | 19 |
| Bsp143I | GATC | 3 cut(s) | 58, 130, 172 |
| BspANI | GGCC | 1 cut(s) | 17 |
| BspCNI | CTCAG | 2 cut(s) | 211, 250 |
| BspHI | TCATGA | 1 cut(s) | 240 |
| BspLI | GGNNCC | 2 cut(s) | 17, 174 |
| BspMI | ACCTGC | 1 cut(s) | 241 |
| BspPI | GGATC | 2 cut(s) | 167, 180 |
| BssECI | CCNNGG | 1 cut(s) | 119 |
| BssMI | GATC | 3 cut(s) | 58, 130, 172 |
| Bst4CI | ACNGT | 3 cut(s) | 169, 276, 330 |
| Bst6I | CTCTTC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 2 cut(s) | 198, 258 |
| BstDSI | CCRYGG | 1 cut(s) | 119 |
| BstKTI | GATC | 3 cut(s) | 61, 133, 175 |
| BstMAI | GTCTC | 1 cut(s) | 265 |
| BstMBI | GATC | 3 cut(s) | 58, 130, 172 |
| BstSLI | GKGCMC | 1 cut(s) | 19 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 17 |
| BtgI | CCRYGG | 1 cut(s) | 119 |
| BtsI | GCAGTG | 2 cut(s) | 328, 368 |
| BtsIMutI | CAGTG | 2 cut(s) | 328, 368 |
| BveI | ACCTGC | 1 cut(s) | 241 |
| CciI | TCATGA | 1 cut(s) | 240 |
| Cfr13I | GGNCC | 2 cut(s) | 15, 16 |
| CviAII | CATG | 2 cut(s) | 134, 241 |
| CviJI | RGCY | 4 cut(s) | 17, 53, 306, 367 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 53, 306, 367 |
| DdeI | CTNAG | 2 cut(s) | 198, 258 |
| DpnI | GATC | 3 cut(s) | 60, 132, 174 |
| DpnII | GATC | 3 cut(s) | 58, 130, 172 |
| Eam1104I | CTCTTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 21 |
| Eco24I | GRGCYC | 1 cut(s) | 19 |
| EcoO109I | RGGNCCY | 1 cut(s) | 16 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| EcoT38I | GRGCYC | 1 cut(s) | 19 |
| FaeI | CATG | 2 cut(s) | 137, 244 |
| FaiI | YATR | 3 cut(s) | 135, 242, 339 |
| FaqI | GGGAC | 1 cut(s) | 295 |
| FatI | CATG | 2 cut(s) | 133, 240 |
| FbaI | TGATCA | 1 cut(s) | 130 |
| FriOI | GRGCYC | 1 cut(s) | 19 |
| HaeIII | GGCC | 1 cut(s) | 17 |
| Hin1II | CATG | 2 cut(s) | 137, 244 |
| HindIII | AAGCTT | 1 cut(s) | 51 |
| HinfI | GANTC | 3 cut(s) | 64, 115, 211 |
| Hpy166II | GTNNAC | 2 cut(s) | 123, 326 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 160, 259 |
| Hpy188III | TCNNGA | 1 cut(s) | 241 |
| Hpy8I | GTNNAC | 2 cut(s) | 123, 326 |
| HpyAV | CCTTC | 2 cut(s) | 94, 103 |
| HpyCH4III | ACNGT | 3 cut(s) | 169, 276, 330 |
| HpyCH4IV | ACGT | 1 cut(s) | 125 |
| HpyCH4V | TGCA | 4 cut(s) | 89, 155, 321, 373 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 258 |
| HpySE526I | ACGT | 1 cut(s) | 125 |
| Hsp92II | CATG | 2 cut(s) | 137, 244 |
| Ksp22I | TGATCA | 1 cut(s) | 130 |
| Kzo9I | GATC | 3 cut(s) | 58, 130, 172 |
| LpnPI | CCDG | 2 cut(s) | 246, 262 |
| LweI | GCATC | 1 cut(s) | 164 |
| MaeII | ACGT | 1 cut(s) | 125 |
| MalI | GATC | 3 cut(s) | 60, 132, 174 |
| MboI | GATC | 3 cut(s) | 58, 130, 172 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MflI | RGATCY | 1 cut(s) | 172 |
| MhlI | GDGCHC | 1 cut(s) | 19 |
| MluCI | AATT | 1 cut(s) | 193 |
| MlyI | GAGTC | 1 cut(s) | 124 |
| MnlI | CCTC | 3 cut(s) | 22, 307, 349 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MseI | TTAA | 3 cut(s) | 150, 192, 228 |
| NdeII | GATC | 3 cut(s) | 58, 130, 172 |
| NlaIII | CATG | 2 cut(s) | 137, 244 |
| NlaIV | GGNNCC | 2 cut(s) | 17, 174 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| PagI | TCATGA | 1 cut(s) | 240 |
| PfeI | GAWTC | 2 cut(s) | 64, 211 |
| PleI | GAGTC | 1 cut(s) | 123 |
| PpsI | GAGTC | 1 cut(s) | 123 |
| PspN4I | GGNNCC | 2 cut(s) | 17, 174 |
| PspOMI | GGGCCC | 1 cut(s) | 15 |
| PspPI | GGNCC | 2 cut(s) | 15, 16 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| SaqAI | TTAA | 3 cut(s) | 150, 192, 228 |
| Sau3AI | GATC | 3 cut(s) | 58, 130, 172 |
| Sau96I | GGNCC | 2 cut(s) | 15, 16 |
| SchI | GAGTC | 1 cut(s) | 124 |
| SduI | GDGCHC | 1 cut(s) | 19 |
| SetI | ASST | 8 cut(s) | 33, 55, 105, 128, 226, 235, 360, 380 |
| SfaNI | GCATC | 1 cut(s) | 164 |
| Sse9I | AATT | 1 cut(s) | 193 |
| TaaI | ACNGT | 3 cut(s) | 169, 276, 330 |
| TaiI | ACGT | 1 cut(s) | 128 |
| TaqI | TCGA | 1 cut(s) | 343 |
| TasI | AATT | 1 cut(s) | 193 |
| TfiI | GAWTC | 2 cut(s) | 64, 211 |
| Tru1I | TTAA | 3 cut(s) | 150, 192, 228 |
| Tru9I | TTAA | 3 cut(s) | 150, 192, 228 |
| TscAI | CASTG | 2 cut(s) | 328, 375 |
| TspDTI | ATGAA | 2 cut(s) | 17, 229 |
| TspGWI | ACGGA | 1 cut(s) | 108 |
| TspRI | CASTG | 2 cut(s) | 328, 375 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |