Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 572 |
| AccBSI | CCGCTC | 1 cut(s) | 403 |
| AciI | CCGC | 6 cut(s) | 329, 401, 516, 785, 788, 809 |
| AclWI | GGATC | 1 cut(s) | 726 |
| AcoI | YGGCCR | 1 cut(s) | 800 |
| AcsI | RAATTY | 2 cut(s) | 499, 689 |
| AcuI | CTGAAG | 2 cut(s) | 19, 471 |
| AfaI | GTAC | 1 cut(s) | 849 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 274, 275, 406, 559, 638, 821 |
| AgsI | TTSAA | 2 cut(s) | 322, 427 |
| Alw26I | GTCTC | 2 cut(s) | 255, 330 |
| AlwI | GGATC | 1 cut(s) | 726 |
| AoxI | GGCC | 1 cut(s) | 800 |
| ApoI | RAATTY | 2 cut(s) | 499, 689 |
| AseI | ATTAAT | 1 cut(s) | 201 |
| AspLEI | GCGC | 1 cut(s) | 622 |
| AspS9I | GGNCC | 3 cut(s) | 348, 625, 790 |
| AsuHPI | GGTGA | 2 cut(s) | 343, 391 |
| AvaII | GGWCC | 3 cut(s) | 348, 625, 790 |
| BalI | TGGCCA | 1 cut(s) | 802 |
| BccI | CCATC | 7 cut(s) | 37, 70, 118, 138, 561, 664, 792 |
| BceAI | ACGGC | 1 cut(s) | 276 |
| BclI | TGATCA | 1 cut(s) | 676 |
| BcoDI | GTCTC | 2 cut(s) | 255, 330 |
| BfaI | CTAG | 3 cut(s) | 272, 654, 696 |
| BfoI | RGCGCY | 1 cut(s) | 623 |
| BglII | AGATCT | 1 cut(s) | 190 |
| BisI | GCNGC | 1 cut(s) | 786 |
| BlsI | GCNGC | 1 cut(s) | 787 |
| Bme18I | GGWCC | 3 cut(s) | 348, 625, 790 |
| BmgT120I | GGNCC | 3 cut(s) | 348, 625, 790 |
| BmiI | GGNNCC | 1 cut(s) | 813 |
| BmrI | ACTGGG | 1 cut(s) | 543 |
| BmuI | ACTGGG | 1 cut(s) | 543 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 727, 759 |
| BpuEI | CTTGAG | 2 cut(s) | 52, 389 |
| BsaJI | CCNNGG | 1 cut(s) | 344 |
| BsaWI | WCCGGW | 1 cut(s) | 183 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 529, 559 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 274, 275, 406, 559, 638, 821 |
| Bse1I | ACTGG | 2 cut(s) | 538, 851 |
| BseDI | CCNNGG | 1 cut(s) | 344 |
| BseGI | GGATG | 3 cut(s) | 149, 400, 679 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 274, 275, 406, 559, 638, 821 |
| BseNI | ACTGG | 2 cut(s) | 538, 851 |
| BseRI | GAGGAG | 1 cut(s) | 62 |
| BseYI | CCCAGC | 1 cut(s) | 577 |
| BshFI | GGCC | 1 cut(s) | 802 |
| BsiSI | CCGG | 1 cut(s) | 184 |
| BslFI | GGGAC | 2 cut(s) | 101, 251 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 274, 275, 406, 559, 638, 821 |
| BsmAI | GTCTC | 2 cut(s) | 255, 330 |
| BsmFI | GGGAC | 2 cut(s) | 101, 251 |
| BsnI | GGCC | 1 cut(s) | 802 |
| Bsp143I | GATC | 4 cut(s) | 190, 412, 676, 718 |
| Bsp19I | CCATGG | 1 cut(s) | 344 |
| BspACI | CCGC | 6 cut(s) | 329, 401, 516, 785, 788, 809 |
| BspANI | GGCC | 1 cut(s) | 802 |
| BspHI | TCATGA | 1 cut(s) | 745 |
| BspLI | GGNNCC | 1 cut(s) | 813 |
| BspPI | GGATC | 1 cut(s) | 726 |
| BsrBI | CCGCTC | 1 cut(s) | 403 |
| BsrI | ACTGG | 2 cut(s) | 538, 851 |
| BssECI | CCNNGG | 1 cut(s) | 344 |
| BssMI | GATC | 4 cut(s) | 190, 412, 676, 718 |
| BssT1I | CCWWGG | 1 cut(s) | 344 |
| Bst4CI | ACNGT | 2 cut(s) | 379, 385 |
| BstDSI | CCRYGG | 1 cut(s) | 344 |
| BstF5I | GGATG | 3 cut(s) | 149, 400, 679 |
| BstH2I | RGCGCY | 1 cut(s) | 623 |
| BstHHI | GCGC | 1 cut(s) | 622 |
| BstKTI | GATC | 4 cut(s) | 193, 415, 679, 721 |
| BstMAI | GTCTC | 2 cut(s) | 255, 330 |
| BstMBI | GATC | 4 cut(s) | 190, 412, 676, 718 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 513 |
| BstNSI | RCATGY | 1 cut(s) | 311 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 144 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 802 |
| BtgI | CCRYGG | 1 cut(s) | 344 |
| BtsCI | GGATG | 3 cut(s) | 149, 400, 679 |
| BtsIMutI | CAGTG | 1 cut(s) | 531 |
| CciI | TCATGA | 1 cut(s) | 745 |
| CfoI | GCGC | 1 cut(s) | 622 |
| Cfr13I | GGNCC | 3 cut(s) | 348, 625, 790 |
| CpoI | CGGWCCG | 1 cut(s) | 790 |
| Csp6I | GTAC | 1 cut(s) | 848 |
| CspI | CGGWCCG | 1 cut(s) | 790 |
| CviAII | CATG | 4 cut(s) | 308, 345, 473, 746 |
| CviJI | RGCY | 9 cut(s) | 223, 342, 448, 464, 577, 724, 743, 755, 802 |
| CviKI_1 | RGCY | 9 cut(s) | 223, 342, 448, 464, 577, 724, 743, 755, 802 |
| CviQI | GTAC | 1 cut(s) | 848 |
| DpnI | GATC | 4 cut(s) | 192, 414, 678, 720 |
| DpnII | GATC | 4 cut(s) | 190, 412, 676, 718 |
| EaeI | YGGCCR | 1 cut(s) | 800 |
| EciI | GGCGGA | 2 cut(s) | 803, 824 |
| Eco130I | CCWWGG | 1 cut(s) | 344 |
| Eco47I | GGWCC | 3 cut(s) | 348, 625, 790 |
| Eco57I | CTGAAG | 2 cut(s) | 19, 471 |
| EcoT14I | CCWWGG | 1 cut(s) | 344 |
| ErhI | CCWWGG | 1 cut(s) | 344 |
| FaeI | CATG | 4 cut(s) | 311, 348, 476, 749 |
| FaqI | GGGAC | 2 cut(s) | 101, 251 |
| FatI | CATG | 4 cut(s) | 307, 344, 472, 745 |
| FauI | CCCGC | 1 cut(s) | 408 |
| FbaI | TGATCA | 1 cut(s) | 676 |
| Fnu4HI | GCNGC | 1 cut(s) | 786 |
| FokI | GGATG | 3 cut(s) | 156, 407, 686 |
| Fsp4HI | GCNGC | 1 cut(s) | 786 |
| FspBI | CTAG | 3 cut(s) | 272, 654, 696 |
| GlaI | GCGC | 1 cut(s) | 621 |
| GluI | GCNGC | 1 cut(s) | 786 |
| GsaI | CCCAGC | 1 cut(s) | 581 |
| HaeII | RGCGCY | 1 cut(s) | 623 |
| HaeIII | GGCC | 1 cut(s) | 802 |
| HapII | CCGG | 1 cut(s) | 184 |
| HhaI | GCGC | 1 cut(s) | 622 |
| Hin1II | CATG | 4 cut(s) | 311, 348, 476, 749 |
| Hin6I | GCGC | 1 cut(s) | 620 |
| HinP1I | GCGC | 1 cut(s) | 620 |
| HincII | GTYRAC | 1 cut(s) | 834 |
| HindII | GTYRAC | 1 cut(s) | 834 |
| HinfI | GANTC | 2 cut(s) | 255, 418 |
| HpaII | CCGG | 1 cut(s) | 184 |
| HphI | GGTGA | 2 cut(s) | 343, 391 |
| Hpy166II | GTNNAC | 2 cut(s) | 548, 834 |
| Hpy188I | TCNGA | 4 cut(s) | 38, 114, 172, 417 |
| Hpy188III | TCNNGA | 4 cut(s) | 69, 252, 746, 866 |
| Hpy8I | GTNNAC | 2 cut(s) | 548, 834 |
| Hpy99I | CGWCG | 2 cut(s) | 730, 798 |
| HpyAV | CCTTC | 3 cut(s) | 446, 559, 743 |
| HpyCH4III | ACNGT | 2 cut(s) | 379, 385 |
| HpyCH4IV | ACGT | 1 cut(s) | 728 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 513 |
| HpySE526I | ACGT | 1 cut(s) | 728 |
| Hsp92II | CATG | 4 cut(s) | 311, 348, 476, 749 |
| HspAI | GCGC | 1 cut(s) | 620 |
| Ksp22I | TGATCA | 1 cut(s) | 676 |
| Kzo9I | GATC | 4 cut(s) | 190, 412, 676, 718 |
| LmnI | GCTCC | 2 cut(s) | 279, 777 |
| LpnPI | CCDG | 7 cut(s) | 197, 462, 519, 563, 608, 624, 864 |
| MaeI | CTAG | 3 cut(s) | 272, 654, 696 |
| MaeII | ACGT | 1 cut(s) | 728 |
| MaeIII | GTNAC | 1 cut(s) | 379 |
| MalI | GATC | 4 cut(s) | 192, 414, 678, 720 |
| MbiI | CCGCTC | 1 cut(s) | 403 |
| MboI | GATC | 4 cut(s) | 190, 412, 676, 718 |
| MboII | GAAGA | 5 cut(s) | 25, 133, 142, 439, 502 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MlsI | TGGCCA | 1 cut(s) | 802 |
| MluCI | AATT | 3 cut(s) | 499, 662, 689 |
| MluNI | TGGCCA | 1 cut(s) | 802 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 4 cut(s) | 40, 268, 652, 706 |
| Mox20I | TGGCCA | 1 cut(s) | 802 |
| MscI | TGGCCA | 1 cut(s) | 802 |
| MseI | TTAA | 4 cut(s) | 201, 303, 585, 731 |
| MslI | CAYNNNNRTG | 1 cut(s) | 377 |
| Msp20I | TGGCCA | 1 cut(s) | 802 |
| MspI | CCGG | 1 cut(s) | 184 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 513 |
| NcoI | CCATGG | 1 cut(s) | 344 |
| NdeII | GATC | 4 cut(s) | 190, 412, 676, 718 |
| NlaIII | CATG | 4 cut(s) | 311, 348, 476, 749 |
| NlaIV | GGNNCC | 1 cut(s) | 813 |
| NmuCI | GTSAC | 1 cut(s) | 379 |
| NspI | RCATGY | 1 cut(s) | 311 |
| PagI | TCATGA | 1 cut(s) | 745 |
| PfeI | GAWTC | 2 cut(s) | 255, 418 |
| PkrI | GCNGC | 1 cut(s) | 787 |
| PshBI | ATTAAT | 1 cut(s) | 201 |
| PsiI | TTATAA | 1 cut(s) | 572 |
| PspFI | CCCAGC | 1 cut(s) | 577 |
| PspN4I | GGNNCC | 1 cut(s) | 813 |
| PspPI | GGNCC | 3 cut(s) | 348, 625, 790 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| RsaI | GTAC | 1 cut(s) | 849 |
| RsaNI | GTAC | 1 cut(s) | 848 |
| RseI | CAYNNNNRTG | 1 cut(s) | 377 |
| Rsr2I | CGGWCCG | 1 cut(s) | 790 |
| RsrII | CGGWCCG | 1 cut(s) | 790 |
| SaqAI | TTAA | 4 cut(s) | 201, 303, 585, 731 |
| SatI | GCNGC | 1 cut(s) | 786 |
| Sau3AI | GATC | 4 cut(s) | 190, 412, 676, 718 |
| Sau96I | GGNCC | 3 cut(s) | 348, 625, 790 |
| SetI | ASST | 6 cut(s) | 363, 411, 570, 630, 717, 731 |
| SinI | GGWCC | 3 cut(s) | 348, 625, 790 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 377 |
| SmlI | CTYRAG | 2 cut(s) | 67, 404 |
| SmoI | CTYRAG | 2 cut(s) | 67, 404 |
| Sse9I | AATT | 3 cut(s) | 499, 662, 689 |
| SsiI | CCGC | 6 cut(s) | 329, 401, 516, 785, 788, 809 |
| SspMI | CTAG | 3 cut(s) | 272, 654, 696 |
| StyI | CCWWGG | 1 cut(s) | 344 |
| TaaI | ACNGT | 2 cut(s) | 379, 385 |
| TaiI | ACGT | 1 cut(s) | 731 |
| TaqI | TCGA | 2 cut(s) | 242, 253 |
| TaqII | GACCGA | 1 cut(s) | 807 |
| TasI | AATT | 3 cut(s) | 499, 662, 689 |
| TauI | GCSGC | 1 cut(s) | 788 |
| TfiI | GAWTC | 2 cut(s) | 255, 418 |
| Tru1I | TTAA | 4 cut(s) | 201, 303, 585, 731 |
| Tru9I | TTAA | 4 cut(s) | 201, 303, 585, 731 |
| TscAI | CASTG | 1 cut(s) | 538 |
| TseFI | GTSAC | 1 cut(s) | 379 |
| Tsp45I | GTSAC | 1 cut(s) | 379 |
| TspDTI | ATGAA | 4 cut(s) | 224, 369, 410, 762 |
| TspRI | CASTG | 1 cut(s) | 538 |
| VpaK11BI | GGWCC | 3 cut(s) | 348, 625, 790 |
| VspI | ATTAAT | 1 cut(s) | 201 |
| XapI | RAATTY | 2 cut(s) | 499, 689 |
| XceI | RCATGY | 1 cut(s) | 311 |
| XspI | CTAG | 3 cut(s) | 272, 654, 696 |