Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 116 - 150 | 1.7e-07 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 19 |
| Acc16I | TGCGCA | 1 cut(s) | 705 |
| Acc36I | ACCTGC | 1 cut(s) | 17 |
| AccB1I | GGYRCC | 1 cut(s) | 232 |
| AciI | CCGC | 3 cut(s) | 230, 394, 1349 |
| AclWI | GGATC | 2 cut(s) | 921, 934 |
| AcoI | YGGCCR | 2 cut(s) | 395, 427 |
| AcsI | RAATTY | 5 cut(s) | 264, 292, 854, 877, 1183 |
| AcuI | CTGAAG | 3 cut(s) | 327, 1020, 1199 |
| AcyI | GRCGYC | 2 cut(s) | 16, 655 |
| AfaI | GTAC | 3 cut(s) | 1072, 1197, 1296 |
| AflII | CTTAAG | 2 cut(s) | 628, 1259 |
| AgsI | TTSAA | 4 cut(s) | 263, 781, 827, 1273 |
| AjnI | CCWGG | 1 cut(s) | 456 |
| AluBI | AGCT | 3 cut(s) | 305, 962, 995 |
| AluI | AGCT | 3 cut(s) | 305, 962, 995 |
| Alw26I | GTCTC | 5 cut(s) | 189, 236, 679, 931, 1301 |
| AlwI | GGATC | 2 cut(s) | 921, 934 |
| AoxI | GGCC | 3 cut(s) | 395, 427, 488 |
| ApeKI | GCWGC | 1 cut(s) | 644 |
| ApoI | RAATTY | 5 cut(s) | 264, 292, 854, 877, 1183 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1010 |
| AspLEI | GCGC | 1 cut(s) | 706 |
| AspS9I | GGNCC | 2 cut(s) | 722, 1174 |
| AsuHPI | GGTGA | 4 cut(s) | 554, 581, 738, 1093 |
| AvaII | GGWCC | 2 cut(s) | 722, 1174 |
| BalI | TGGCCA | 1 cut(s) | 429 |
| BamHI | GGATCC | 1 cut(s) | 926 |
| BanI | GGYRCC | 1 cut(s) | 232 |
| BbvI | GCAGC | 1 cut(s) | 631 |
| BccI | CCATC | 8 cut(s) | 4, 438, 555, 566, 713, 830, 1088, 1243 |
| BceAI | ACGGC | 1 cut(s) | 668 |
| BciT130I | CCWGG | 1 cut(s) | 458 |
| BciVI | GTATCC | 2 cut(s) | 133, 1109 |
| BcoDI | GTCTC | 5 cut(s) | 189, 236, 679, 931, 1301 |
| BfaI | CTAG | 3 cut(s) | 606, 648, 689 |
| BfrI | CTTAAG | 2 cut(s) | 628, 1259 |
| BfuAI | ACCTGC | 1 cut(s) | 17 |
| BfuI | GTATCC | 2 cut(s) | 133, 1109 |
| BisI | GCNGC | 2 cut(s) | 395, 645 |
| BlsI | GCNGC | 2 cut(s) | 396, 646 |
| Bme1390I | CCNGG | 1 cut(s) | 458 |
| Bme18I | GGWCC | 2 cut(s) | 722, 1174 |
| BmgT120I | GGNCC | 2 cut(s) | 722, 1174 |
| BmiI | GGNNCC | 5 cut(s) | 165, 234, 887, 928, 1175 |
| BmrFI | CCNGG | 1 cut(s) | 458 |
| BmsI | GCATC | 3 cut(s) | 664, 691, 1074 |
| BsaHI | GRCGYC | 2 cut(s) | 16, 655 |
| BsaJI | CCNNGG | 4 cut(s) | 167, 457, 930, 1298 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 526, 556 |
| Bse3DI | GCAATG | 1 cut(s) | 278 |
| BseBI | CCWGG | 1 cut(s) | 458 |
| BseDI | CCNNGG | 4 cut(s) | 167, 457, 930, 1298 |
| BseGI | GGATG | 8 cut(s) | 223, 346, 430, 566, 679, 706, 1099, 1285 |
| BseMI | GCAATG | 1 cut(s) | 278 |
| BseMII | CTCAG | 5 cut(s) | 288, 504, 875, 1175, 1303 |
| BseRI | GAGGAG | 2 cut(s) | 547, 653 |
| BseXI | GCAGC | 1 cut(s) | 631 |
| BseYI | CCCAGC | 1 cut(s) | 81 |
| BsgI | GTGCAG | 1 cut(s) | 339 |
| BshFI | GGCC | 3 cut(s) | 397, 429, 490 |
| BshNI | GGYRCC | 1 cut(s) | 232 |
| BsiSI | CCGG | 1 cut(s) | 1205 |
| BslFI | GGGAC | 4 cut(s) | 27, 185, 342, 1187 |
| BsmAI | GTCTC | 5 cut(s) | 189, 236, 679, 931, 1301 |
| BsmBI | CGTCTC | 1 cut(s) | 931 |
| BsmFI | GGGAC | 4 cut(s) | 27, 185, 342, 1187 |
| BsnI | GGCC | 3 cut(s) | 397, 429, 490 |
| Bsp1407I | TGTACA | 1 cut(s) | 1195 |
| Bsp143I | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| BspACI | CCGC | 3 cut(s) | 230, 394, 1349 |
| BspANI | GGCC | 3 cut(s) | 397, 429, 490 |
| BspCNI | CTCAG | 5 cut(s) | 289, 505, 874, 1174, 1302 |
| BspLI | GGNNCC | 5 cut(s) | 165, 234, 887, 928, 1175 |
| BspMI | ACCTGC | 1 cut(s) | 17 |
| BspPI | GGATC | 2 cut(s) | 921, 934 |
| BspT107I | GGYRCC | 1 cut(s) | 232 |
| BspTI | CTTAAG | 2 cut(s) | 628, 1259 |
| BsrDI | GCAATG | 1 cut(s) | 278 |
| BsrGI | TGTACA | 1 cut(s) | 1195 |
| BssECI | CCNNGG | 4 cut(s) | 167, 457, 930, 1298 |
| BssMI | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| BssNI | GRCGYC | 2 cut(s) | 16, 655 |
| BssT1I | CCWWGG | 3 cut(s) | 167, 930, 1298 |
| Bst2UI | CCWGG | 1 cut(s) | 458 |
| Bst6I | CTCTTC | 1 cut(s) | 996 |
| BstACI | GRCGYC | 2 cut(s) | 16, 655 |
| BstAFI | CTTAAG | 2 cut(s) | 628, 1259 |
| BstAUI | TGTACA | 1 cut(s) | 1195 |
| BstC8I | GCNNGC | 1 cut(s) | 663 |
| BstDEI | CTNAG | 8 cut(s) | 206, 297, 506, 513, 861, 1103, 1161, 1289 |
| BstF5I | GGATG | 8 cut(s) | 223, 346, 430, 566, 679, 706, 1099, 1285 |
| BstHHI | GCGC | 1 cut(s) | 706 |
| BstKTI | GATC | 4 cut(s) | 112, 454, 929, 1160 |
| BstMAI | GTCTC | 5 cut(s) | 189, 236, 679, 931, 1301 |
| BstMBI | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 701 |
| BstNI | CCWGG | 1 cut(s) | 458 |
| BstNSI | RCATGY | 1 cut(s) | 1196 |
| BstSCI | CCNGG | 1 cut(s) | 456 |
| BstV1I | GCAGC | 1 cut(s) | 631 |
| BstX2I | RGATCY | 1 cut(s) | 926 |
| BstYI | RGATCY | 1 cut(s) | 926 |
| BsuI | GTATCC | 2 cut(s) | 133, 1109 |
| BsuRI | GGCC | 3 cut(s) | 397, 429, 490 |
| BtsCI | GGATG | 8 cut(s) | 223, 346, 430, 566, 679, 706, 1099, 1285 |
| BtsI | GCAGTG | 1 cut(s) | 735 |
| BtsIMutI | CAGTG | 2 cut(s) | 735, 1297 |
| BveI | ACCTGC | 1 cut(s) | 17 |
| Cac8I | GCNNGC | 1 cut(s) | 663 |
| CfoI | GCGC | 1 cut(s) | 706 |
| Cfr13I | GGNCC | 2 cut(s) | 722, 1174 |
| CseI | GACGC | 2 cut(s) | 644, 945 |
| Csp6I | GTAC | 3 cut(s) | 1071, 1196, 1295 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 777, 812 |
| CviAII | CATG | 4 cut(s) | 527, 770, 1125, 1193 |
| CviQI | GTAC | 3 cut(s) | 1071, 1196, 1295 |
| DdeI | CTNAG | 8 cut(s) | 206, 297, 506, 513, 861, 1103, 1161, 1289 |
| DpnI | GATC | 4 cut(s) | 111, 453, 928, 1159 |
| DpnII | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| DraI | TTTAAA | 2 cut(s) | 382, 951 |
| EaeI | YGGCCR | 2 cut(s) | 395, 427 |
| Eam1104I | CTCTTC | 1 cut(s) | 996 |
| EarI | CTCTTC | 1 cut(s) | 996 |
| Eco130I | CCWWGG | 3 cut(s) | 167, 930, 1298 |
| Eco47I | GGWCC | 2 cut(s) | 722, 1174 |
| Eco57I | CTGAAG | 3 cut(s) | 327, 1020, 1199 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1174 |
| EcoRII | CCWGG | 1 cut(s) | 456 |
| EcoT14I | CCWWGG | 3 cut(s) | 167, 930, 1298 |
| EcoT22I | ATGCAT | 1 cut(s) | 528 |
| ErhI | CCWWGG | 3 cut(s) | 167, 930, 1298 |
| Esp3I | CGTCTC | 1 cut(s) | 931 |
| FaeI | CATG | 4 cut(s) | 530, 773, 1128, 1196 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1253, 1285 |
| FaqI | GGGAC | 4 cut(s) | 27, 185, 342, 1187 |
| FatI | CATG | 4 cut(s) | 526, 769, 1124, 1192 |
| Fnu4HI | GCNGC | 2 cut(s) | 395, 645 |
| FokI | GGATG | 8 cut(s) | 230, 353, 417, 573, 686, 713, 1106, 1292 |
| Fsp4HI | GCNGC | 2 cut(s) | 395, 645 |
| FspBI | CTAG | 3 cut(s) | 606, 648, 689 |
| FspI | TGCGCA | 1 cut(s) | 705 |
| GlaI | GCGC | 1 cut(s) | 705 |
| GluI | GCNGC | 2 cut(s) | 395, 645 |
| GsaI | CCCAGC | 1 cut(s) | 85 |
| HaeIII | GGCC | 3 cut(s) | 397, 429, 490 |
| HapII | CCGG | 1 cut(s) | 1205 |
| HgaI | GACGC | 2 cut(s) | 644, 945 |
| HhaI | GCGC | 1 cut(s) | 706 |
| Hin1I | GRCGYC | 2 cut(s) | 16, 655 |
| Hin1II | CATG | 4 cut(s) | 530, 773, 1128, 1196 |
| Hin6I | GCGC | 1 cut(s) | 704 |
| HinP1I | GCGC | 1 cut(s) | 704 |
| HincII | GTYRAC | 1 cut(s) | 42 |
| HindII | GTYRAC | 1 cut(s) | 42 |
| HinfI | GANTC | 4 cut(s) | 53, 462, 599, 611 |
| HpaI | GTTAAC | 1 cut(s) | 42 |
| HpaII | CCGG | 1 cut(s) | 1205 |
| HphI | GGTGA | 4 cut(s) | 554, 581, 738, 1093 |
| Hpy166II | GTNNAC | 2 cut(s) | 42, 1295 |
| Hpy188I | TCNGA | 7 cut(s) | 129, 298, 435, 467, 835, 1164, 1248 |
| Hpy188III | TCNNGA | 3 cut(s) | 410, 872, 1091 |
| Hpy8I | GTNNAC | 2 cut(s) | 42, 1295 |
| Hpy99I | CGWCG | 1 cut(s) | 660 |
| HpyAV | CCTTC | 6 cut(s) | 469, 675, 775, 907, 1072, 1267 |
| HpyCH4IV | ACGT | 2 cut(s) | 16, 1166 |
| HpyCH4V | TGCA | 6 cut(s) | 283, 320, 526, 677, 769, 1192 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 701 |
| HpyF3I | CTNAG | 8 cut(s) | 206, 297, 506, 513, 861, 1103, 1161, 1289 |
| HpySE526I | ACGT | 2 cut(s) | 16, 1166 |
| Hsp92I | GRCGYC | 2 cut(s) | 16, 655 |
| Hsp92II | CATG | 4 cut(s) | 530, 773, 1128, 1196 |
| HspAI | GCGC | 1 cut(s) | 704 |
| KspAI | GTTAAC | 1 cut(s) | 42 |
| Kzo9I | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| LmnI | GCTCC | 1 cut(s) | 163 |
| Lsp1109I | GCAGC | 1 cut(s) | 631 |
| LweI | GCATC | 3 cut(s) | 664, 691, 1074 |
| MaeI | CTAG | 3 cut(s) | 606, 648, 689 |
| MaeII | ACGT | 2 cut(s) | 16, 1166 |
| MaeIII | GTNAC | 3 cut(s) | 85, 608, 896 |
| MalI | GATC | 4 cut(s) | 111, 453, 928, 1159 |
| MboI | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| MboII | GAAGA | 6 cut(s) | 17, 320, 494, 1013, 1192, 1243 |
| MfeI | CAATTG | 1 cut(s) | 20 |
| MflI | RGATCY | 1 cut(s) | 926 |
| MlsI | TGGCCA | 1 cut(s) | 429 |
| MluNI | TGGCCA | 1 cut(s) | 429 |
| MlyI | GAGTC | 1 cut(s) | 605 |
| MmeI | TCCRAC | 2 cut(s) | 458, 1032 |
| Mox20I | TGGCCA | 1 cut(s) | 429 |
| Mph1103I | ATGCAT | 1 cut(s) | 528 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1010 |
| MscI | TGGCCA | 1 cut(s) | 429 |
| MseI | TTAA | 8 cut(s) | 41, 381, 629, 728, 950, 987, 1211, 1260 |
| MslI | CAYNNNNRTG | 1 cut(s) | 717 |
| Msp20I | TGGCCA | 1 cut(s) | 429 |
| MspA1I | CMGCKG | 1 cut(s) | 230 |
| MspCI | CTTAAG | 2 cut(s) | 628, 1259 |
| MspI | CCGG | 1 cut(s) | 1205 |
| MspR9I | CCNGG | 1 cut(s) | 458 |
| MunI | CAATTG | 1 cut(s) | 20 |
| MvaI | CCWGG | 1 cut(s) | 458 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 701 |
| NdeII | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| NlaIII | CATG | 4 cut(s) | 530, 773, 1128, 1196 |
| NlaIV | GGNNCC | 5 cut(s) | 165, 234, 887, 928, 1175 |
| NmuCI | GTSAC | 1 cut(s) | 608 |
| NsbI | TGCGCA | 1 cut(s) | 705 |
| NsiI | ATGCAT | 1 cut(s) | 528 |
| NspI | RCATGY | 1 cut(s) | 1196 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1010 |
| PfeI | GAWTC | 3 cut(s) | 53, 462, 599 |
| PflFI | GACNNNGTC | 1 cut(s) | 654 |
| PkrI | GCNGC | 2 cut(s) | 396, 646 |
| PleI | GAGTC | 1 cut(s) | 605 |
| PpsI | GAGTC | 1 cut(s) | 605 |
| PpuMI | RGGWCCY | 1 cut(s) | 1174 |
| Psp5II | RGGWCCY | 1 cut(s) | 1174 |
| Psp6I | CCWGG | 1 cut(s) | 456 |
| PspFI | CCCAGC | 1 cut(s) | 81 |
| PspGI | CCWGG | 1 cut(s) | 456 |
| PspN4I | GGNNCC | 5 cut(s) | 165, 234, 887, 928, 1175 |
| PspPI | GGNCC | 2 cut(s) | 722, 1174 |
| PspPPI | RGGWCCY | 1 cut(s) | 1174 |
| PsuI | RGATCY | 1 cut(s) | 926 |
| PsyI | GACNNNGTC | 1 cut(s) | 654 |
| RsaI | GTAC | 3 cut(s) | 1072, 1197, 1296 |
| RsaNI | GTAC | 3 cut(s) | 1071, 1196, 1295 |
| RseI | CAYNNNNRTG | 1 cut(s) | 717 |
| SaqAI | TTAA | 8 cut(s) | 41, 381, 629, 728, 950, 987, 1211, 1260 |
| SatI | GCNGC | 2 cut(s) | 395, 645 |
| Sau3AI | GATC | 4 cut(s) | 109, 451, 926, 1157 |
| Sau96I | GGNCC | 2 cut(s) | 722, 1174 |
| SchI | GAGTC | 1 cut(s) | 605 |
| ScrFI | CCNGG | 1 cut(s) | 458 |
| SfaNI | GCATC | 3 cut(s) | 664, 691, 1074 |
| SinI | GGWCC | 2 cut(s) | 722, 1174 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 717 |
| SmlI | CTYRAG | 2 cut(s) | 628, 1259 |
| SmoI | CTYRAG | 2 cut(s) | 628, 1259 |
| SsiI | CCGC | 3 cut(s) | 230, 394, 1349 |
| SspI | AATATT | 1 cut(s) | 1358 |
| SspMI | CTAG | 3 cut(s) | 606, 648, 689 |
| StyD4I | CCNGG | 1 cut(s) | 456 |
| StyI | CCWWGG | 3 cut(s) | 167, 930, 1298 |
| TaiI | ACGT | 2 cut(s) | 19, 1169 |
| TaqI | TCGA | 1 cut(s) | 556 |
| TatI | WGTACW | 2 cut(s) | 1070, 1195 |
| TauI | GCSGC | 1 cut(s) | 397 |
| TfiI | GAWTC | 3 cut(s) | 53, 462, 599 |
| Tru1I | TTAA | 8 cut(s) | 41, 381, 629, 728, 950, 987, 1211, 1260 |
| Tru9I | TTAA | 8 cut(s) | 41, 381, 629, 728, 950, 987, 1211, 1260 |
| TscAI | CASTG | 2 cut(s) | 742, 1297 |
| TseFI | GTSAC | 1 cut(s) | 608 |
| TseI | GCWGC | 1 cut(s) | 644 |
| Tsp45I | GTSAC | 1 cut(s) | 608 |
| TspDTI | ATGAA | 5 cut(s) | 257, 701, 867, 1244, 1296 |
| TspGWI | ACGGA | 5 cut(s) | 59, 158, 714, 955, 1048 |
| TspRI | CASTG | 2 cut(s) | 742, 1297 |
| Tth111I | GACNNNGTC | 1 cut(s) | 654 |
| Vha464I | CTTAAG | 2 cut(s) | 628, 1259 |
| VpaK11BI | GGWCC | 2 cut(s) | 722, 1174 |
| XapI | RAATTY | 5 cut(s) | 264, 292, 854, 877, 1183 |
| XceI | RCATGY | 1 cut(s) | 1196 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1010 |
| XspI | CTAG | 3 cut(s) | 606, 648, 689 |
| ZraI | GACGTC | 1 cut(s) | 17 |
| Zsp2I | ATGCAT | 1 cut(s) | 528 |