No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 160 - 198 | 1.2e-07 | PPR repeat family |
| PPR_2 | PF13041 | 263 - 310 | 7.5e-08 | PPR repeat family |
| PPR | PF01535 | 265 - 295 | 4e-07 | PPR repeat |
| PPR_2 | PF13041 | 368 - 413 | 5.9e-06 | PPR repeat family |
| PPR | PF01535 | 469 - 496 | 7.6e-06 | PPR repeat |
| PPR_2 | PF13041 | 584 - 616 | 1.1e-06 | PPR repeat family |
| PPR | PF01535 | 587 - 616 | 3.4e-08 | PPR repeat |
| E_motif | PF20431 | 708 - 770 | 3.6e-21 | E motif |
| Eplus_motif | PF20430 | 775 - 802 | 8.2e-07 | E+ motif |
| DYW_deaminase | PF14432 | 806 - 898 | 7.3e-45 | DYW family of nucleic acid deaminases |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2075 |
| AatII | GACGTC | 1 cut(s) | 1450 |
| Acc36I | ACCTGC | 2 cut(s) | 1987, 2075 |
| AccB1I | GGYRCC | 1 cut(s) | 2087 |
| AccBSI | CCGCTC | 2 cut(s) | 180, 1090 |
| AccI | GTMKAC | 2 cut(s) | 189, 2116 |
| AccIII | TCCGGA | 1 cut(s) | 2253 |
| AciI | CCGC | 7 cut(s) | 18, 138, 178, 296, 1090, 1240, 1291 |
| AclWI | GGATC | 5 cut(s) | 486, 1618, 2256, 2312, 2352 |
| AcsI | RAATTY | 6 cut(s) | 365, 493, 622, 960, 1000, 1362 |
| AcuI | CTGAAG | 1 cut(s) | 1266 |
| AcyI | GRCGYC | 1 cut(s) | 1447 |
| AdeI | CACNNNGTG | 1 cut(s) | 2363 |
| AfaI | GTAC | 4 cut(s) | 1313, 1340, 1516, 2442 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 183, 184, 210, 841, 2170, 2535 |
| AflII | CTTAAG | 1 cut(s) | 1547 |
| AflIII | ACRYGT | 3 cut(s) | 1029, 1335, 1689 |
| AgeI | ACCGGT | 1 cut(s) | 834 |
| AgsI | TTSAA | 6 cut(s) | 323, 331, 1172, 1750, 1976, 2315 |
| AjnI | CCWGG | 5 cut(s) | 789, 1763, 2090, 2290, 2533 |
| AluBI | AGCT | 7 cut(s) | 535, 585, 1904, 2100, 2153, 2170, 2371 |
| AluI | AGCT | 7 cut(s) | 535, 585, 1904, 2100, 2153, 2170, 2371 |
| Alw21I | GWGCWC | 1 cut(s) | 1681 |
| Alw26I | GTCTC | 1 cut(s) | 828 |
| Alw44I | GTGCAC | 1 cut(s) | 1677 |
| AlwI | GGATC | 5 cut(s) | 486, 1618, 2256, 2312, 2352 |
| Ama87I | CYCGRG | 4 cut(s) | 754, 875, 1255, 1342 |
| Aor13HI | TCCGGA | 1 cut(s) | 2253 |
| AoxI | GGCC | 6 cut(s) | 306, 315, 1152, 1868, 2241, 2515 |
| ApaLI | GTGCAC | 1 cut(s) | 1677 |
| ApeKI | GCWGC | 8 cut(s) | 506, 605, 1707, 1901, 2150, 2167, 2368, 2591 |
| ApoI | RAATTY | 6 cut(s) | 365, 493, 622, 960, 1000, 1362 |
| AsiGI | ACCGGT | 1 cut(s) | 834 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1943, 2674 |
| AspS9I | GGNCC | 5 cut(s) | 90, 213, 298, 316, 1159 |
| AsuC2I | CCSGG | 2 cut(s) | 211, 293 |
| AsuHPI | GGTGA | 6 cut(s) | 124, 382, 610, 910, 1753, 1940 |
| AsuII | TTCGAA | 1 cut(s) | 620 |
| AvaI | CYCGRG | 4 cut(s) | 754, 875, 1255, 1342 |
| AvaII | GGWCC | 4 cut(s) | 90, 213, 298, 1159 |
| BaeGI | GKGCMC | 2 cut(s) | 1681, 2490 |
| BanI | GGYRCC | 1 cut(s) | 2087 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1295, 1327 |
| BauI | CACGAG | 1 cut(s) | 1568 |
| Bbv12I | GWGCWC | 1 cut(s) | 1681 |
| BbvI | GCAGC | 8 cut(s) | 493, 592, 1694, 1913, 2162, 2179, 2380, 2603 |
| BceAI | ACGGC | 4 cut(s) | 293, 330, 1729, 1984 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 266, 300, 1207, 1241 |
| BciT130I | CCWGG | 5 cut(s) | 791, 1765, 2092, 2292, 2535 |
| BciVI | GTATCC | 3 cut(s) | 365, 743, 1280 |
| BclI | TGATCA | 2 cut(s) | 1422, 1758 |
| BcnI | CCSGG | 2 cut(s) | 211, 293 |
| BcoDI | GTCTC | 1 cut(s) | 828 |
| BfaI | CTAG | 6 cut(s) | 582, 1584, 1641, 1658, 1722, 2187 |
| BfmI | CTRYAG | 2 cut(s) | 1668, 2165 |
| BfrI | CTTAAG | 1 cut(s) | 1547 |
| BfuAI | ACCTGC | 2 cut(s) | 1987, 2075 |
| BfuI | GTATCC | 3 cut(s) | 365, 743, 1280 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 293, 314 |
| BisI | GCNGC | 8 cut(s) | 507, 606, 1708, 1902, 2151, 2168, 2369, 2592 |
| BlsI | GCNGC | 8 cut(s) | 508, 607, 1709, 1903, 2152, 2169, 2370, 2593 |
| Bme1390I | CCNGG | 7 cut(s) | 211, 293, 791, 1765, 2092, 2292, 2535 |
| Bme18I | GGWCC | 4 cut(s) | 90, 213, 298, 1159 |
| BmeT110I | CYCGRG | 4 cut(s) | 754, 875, 1255, 1342 |
| BmgT120I | GGNCC | 5 cut(s) | 90, 213, 298, 316, 1159 |
| BmiI | GGNNCC | 5 cut(s) | 579, 1542, 2089, 2175, 2651 |
| BmrFI | CCNGG | 7 cut(s) | 211, 293, 791, 1765, 2092, 2292, 2535 |
| BmrI | ACTGGG | 2 cut(s) | 1005, 1527 |
| BmsI | GCATC | 4 cut(s) | 433, 1066, 1731, 2601 |
| BmuI | ACTGGG | 2 cut(s) | 1005, 1527 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 569, 601 |
| BpmI | CTGGAG | 3 cut(s) | 1319, 2113, 2192 |
| Bpu14I | TTCGAA | 1 cut(s) | 620 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| BpuMI | CCSGG | 2 cut(s) | 211, 293 |
| BsaAI | YACGTR | 1 cut(s) | 1315 |
| BsaHI | GRCGYC | 1 cut(s) | 1447 |
| BsaJI | CCNNGG | 6 cut(s) | 393, 1155, 1273, 1966, 2244, 2534 |
| BsaWI | WCCGGW | 5 cut(s) | 215, 263, 834, 861, 2253 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 14, 44 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 183, 184, 210, 841, 2170, 2535 |
| Bse118I | RCCGGY | 2 cut(s) | 834, 1044 |
| Bse1I | ACTGG | 6 cut(s) | 1000, 1126, 1432, 1522, 1686, 2505 |
| Bse3DI | GCAATG | 3 cut(s) | 1119, 1887, 2511 |
| BseAI | TCCGGA | 1 cut(s) | 2253 |
| BseBI | CCWGG | 5 cut(s) | 791, 1765, 2092, 2292, 2535 |
| BseDI | CCNNGG | 6 cut(s) | 393, 1155, 1273, 1966, 2244, 2534 |
| BseGI | GGATG | 6 cut(s) | 448, 747, 1353, 1846, 1926, 2409 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 183, 184, 210, 841, 2170, 2535 |
| BseMI | GCAATG | 3 cut(s) | 1119, 1887, 2511 |
| BseMII | CTCAG | 3 cut(s) | 462, 839, 2061 |
| BseNI | ACTGG | 6 cut(s) | 1000, 1126, 1432, 1522, 1686, 2505 |
| BseRI | GAGGAG | 6 cut(s) | 17, 100, 794, 1163, 1818, 2510 |
| BseSI | GKGCMC | 2 cut(s) | 1681, 2490 |
| BseXI | GCAGC | 8 cut(s) | 493, 592, 1694, 1913, 2162, 2179, 2380, 2603 |
| BseYI | CCCAGC | 1 cut(s) | 2339 |
| BsgI | GTGCAG | 2 cut(s) | 591, 1965 |
| BshFI | GGCC | 6 cut(s) | 308, 317, 1154, 1870, 2243, 2517 |
| BshNI | GGYRCC | 1 cut(s) | 2087 |
| BshTI | ACCGGT | 1 cut(s) | 834 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1681 |
| BsiHKCI | CYCGRG | 4 cut(s) | 754, 875, 1255, 1342 |
| BsiSI | CCGG | 8 cut(s) | 211, 216, 264, 293, 835, 862, 1045, 2254 |
| BslFI | GGGAC | 1 cut(s) | 2551 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 183, 184, 210, 841, 2170, 2535 |
| BsmAI | GTCTC | 1 cut(s) | 828 |
| BsmFI | GGGAC | 1 cut(s) | 2551 |
| BsmI | GAATGC | 2 cut(s) | 1114, 1250 |
| BsnI | GGCC | 6 cut(s) | 308, 317, 1154, 1870, 2243, 2517 |
| BsoBI | CYCGRG | 4 cut(s) | 754, 875, 1255, 1342 |
| Bsp119I | TTCGAA | 1 cut(s) | 620 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1681, 2490 |
| Bsp13I | TCCGGA | 1 cut(s) | 2253 |
| Bsp143I | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| Bsp19I | CCATGG | 2 cut(s) | 1273, 2244 |
| BspACI | CCGC | 7 cut(s) | 18, 138, 178, 296, 1090, 1240, 1291 |
| BspANI | GGCC | 6 cut(s) | 308, 317, 1154, 1870, 2243, 2517 |
| BspCNI | CTCAG | 3 cut(s) | 463, 838, 2062 |
| BspEI | TCCGGA | 1 cut(s) | 2253 |
| BspHI | TCATGA | 1 cut(s) | 1450 |
| BspLI | GGNNCC | 5 cut(s) | 579, 1542, 2089, 2175, 2651 |
| BspMAI | CTGCAG | 1 cut(s) | 2169 |
| BspMI | ACCTGC | 2 cut(s) | 1987, 2075 |
| BspPI | GGATC | 5 cut(s) | 486, 1618, 2256, 2312, 2352 |
| BspT104I | TTCGAA | 1 cut(s) | 620 |
| BspT107I | GGYRCC | 1 cut(s) | 2087 |
| BspTI | CTTAAG | 1 cut(s) | 1547 |
| BsrBI | CCGCTC | 2 cut(s) | 180, 1090 |
| BsrDI | GCAATG | 3 cut(s) | 1119, 1887, 2511 |
| BsrFI | RCCGGY | 2 cut(s) | 834, 1044 |
| BsrI | ACTGG | 6 cut(s) | 1000, 1126, 1432, 1522, 1686, 2505 |
| BssAI | RCCGGY | 2 cut(s) | 834, 1044 |
| BssECI | CCNNGG | 6 cut(s) | 393, 1155, 1273, 1966, 2244, 2534 |
| BssMI | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| BssNI | GRCGYC | 1 cut(s) | 1447 |
| BssSI | CACGAG | 1 cut(s) | 1568 |
| BssT1I | CCWWGG | 3 cut(s) | 1155, 1273, 2244 |
| Bst2BI | CACGAG | 1 cut(s) | 1568 |
| Bst2UI | CCWGG | 5 cut(s) | 791, 1765, 2092, 2292, 2535 |
| Bst4CI | ACNGT | 4 cut(s) | 394, 706, 822, 904 |
| Bst6I | CTCTTC | 3 cut(s) | 120, 1581, 1795 |
| BstACI | GRCGYC | 1 cut(s) | 1447 |
| BstAFI | CTTAAG | 1 cut(s) | 1547 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1898 |
| BstBAI | YACGTR | 1 cut(s) | 1315 |
| BstBI | TTCGAA | 1 cut(s) | 620 |
| BstC8I | GCNNGC | 5 cut(s) | 537, 1046, 1230, 2040, 2102 |
| BstDEI | CTNAG | 7 cut(s) | 471, 732, 825, 1711, 1816, 2070, 2564 |
| BstDSI | CCRYGG | 4 cut(s) | 393, 1273, 1966, 2244 |
| BstF5I | GGATG | 6 cut(s) | 448, 747, 1353, 1846, 1926, 2409 |
| BstKTI | GATC | 8 cut(s) | 481, 1425, 1626, 1761, 2251, 2307, 2347, 2628 |
| BstMAI | GTCTC | 1 cut(s) | 828 |
| BstMBI | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 293, 314, 545, 611, 655, 980, 1898, 2173 |
| BstNI | CCWGG | 5 cut(s) | 791, 1765, 2092, 2292, 2535 |
| BstNSI | RCATGY | 5 cut(s) | 927, 1033, 1236, 1339, 1693 |
| BstSCI | CCNGG | 7 cut(s) | 209, 291, 789, 1763, 2090, 2290, 2533 |
| BstSFI | CTRYAG | 2 cut(s) | 1668, 2165 |
| BstSLI | GKGCMC | 2 cut(s) | 1681, 2490 |
| BstV1I | GCAGC | 8 cut(s) | 493, 592, 1694, 1913, 2162, 2179, 2380, 2603 |
| BstX2I | RGATCY | 3 cut(s) | 1623, 2248, 2344 |
| BstYI | RGATCY | 3 cut(s) | 1623, 2248, 2344 |
| BsuI | GTATCC | 3 cut(s) | 365, 743, 1280 |
| BsuRI | GGCC | 6 cut(s) | 308, 317, 1154, 1870, 2243, 2517 |
| BtgI | CCRYGG | 4 cut(s) | 393, 1273, 1966, 2244 |
| BtsCI | GGATG | 6 cut(s) | 448, 747, 1353, 1846, 1926, 2409 |
| BtsI | GCAGTG | 1 cut(s) | 1021 |
| BtsIMutI | CAGTG | 4 cut(s) | 818, 1021, 1425, 1679 |
| BveI | ACCTGC | 2 cut(s) | 1987, 2075 |
| Cac8I | GCNNGC | 5 cut(s) | 537, 1046, 1230, 2040, 2102 |
| CciI | TCATGA | 1 cut(s) | 1450 |
| Cfr10I | RCCGGY | 2 cut(s) | 834, 1044 |
| Cfr13I | GGNCC | 5 cut(s) | 90, 213, 298, 316, 1159 |
| CpoI | CGGWCCG | 1 cut(s) | 213 |
| CseI | GACGC | 1 cut(s) | 1466 |
| CsiI | ACCWGGT | 1 cut(s) | 789 |
| Csp6I | GTAC | 4 cut(s) | 1312, 1339, 1515, 2441 |
| CspAI | ACCGGT | 1 cut(s) | 834 |
| CspI | CGGWCCG | 1 cut(s) | 213 |
| CviQI | GTAC | 4 cut(s) | 1312, 1339, 1515, 2441 |
| DdeI | CTNAG | 7 cut(s) | 471, 732, 825, 1711, 1816, 2070, 2564 |
| DpnI | GATC | 8 cut(s) | 480, 1424, 1625, 1760, 2250, 2306, 2346, 2627 |
| DpnII | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| DraIII | CACNNNGTG | 1 cut(s) | 2363 |
| Eam1104I | CTCTTC | 3 cut(s) | 120, 1581, 1795 |
| EarI | CTCTTC | 3 cut(s) | 120, 1581, 1795 |
| EciI | GGCGGA | 1 cut(s) | 7 |
| Eco130I | CCWWGG | 3 cut(s) | 1155, 1273, 2244 |
| Eco147I | AGGCCT | 2 cut(s) | 1154, 1870 |
| Eco47I | GGWCC | 4 cut(s) | 90, 213, 298, 1159 |
| Eco57I | CTGAAG | 1 cut(s) | 1266 |
| Eco88I | CYCGRG | 4 cut(s) | 754, 875, 1255, 1342 |
| EcoRI | GAATTC | 2 cut(s) | 493, 1000 |
| EcoRII | CCWGG | 5 cut(s) | 789, 1763, 2090, 2290, 2533 |
| EcoT14I | CCWWGG | 3 cut(s) | 1155, 1273, 2244 |
| EcoT22I | ATGCAT | 2 cut(s) | 976, 1797 |
| ErhI | CCWWGG | 3 cut(s) | 1155, 1273, 2244 |
| FaqI | GGGAC | 1 cut(s) | 2551 |
| FauI | CCCGC | 1 cut(s) | 185 |
| FauNDI | CATATG | 1 cut(s) | 2044 |
| FbaI | TGATCA | 2 cut(s) | 1422, 1758 |
| FblI | GTMKAC | 2 cut(s) | 189, 2116 |
| Fnu4HI | GCNGC | 8 cut(s) | 507, 606, 1708, 1902, 2151, 2168, 2369, 2592 |
| FokI | GGATG | 6 cut(s) | 455, 754, 1360, 1853, 1933, 2416 |
| Fsp4HI | GCNGC | 8 cut(s) | 507, 606, 1708, 1902, 2151, 2168, 2369, 2592 |
| FspBI | CTAG | 6 cut(s) | 582, 1584, 1641, 1658, 1722, 2187 |
| GluI | GCNGC | 8 cut(s) | 507, 606, 1708, 1902, 2151, 2168, 2369, 2592 |
| GsaI | CCCAGC | 1 cut(s) | 2343 |
| GsuI | CTGGAG | 3 cut(s) | 1319, 2113, 2192 |
| HaeIII | GGCC | 6 cut(s) | 308, 317, 1154, 1870, 2243, 2517 |
| HapII | CCGG | 8 cut(s) | 211, 216, 264, 293, 835, 862, 1045, 2254 |
| HgaI | GACGC | 1 cut(s) | 1466 |
| Hin1I | GRCGYC | 1 cut(s) | 1447 |
| HincII | GTYRAC | 5 cut(s) | 190, 993, 1027, 1687, 2117 |
| HindII | GTYRAC | 5 cut(s) | 190, 993, 1027, 1687, 2117 |
| HinfI | GANTC | 8 cut(s) | 377, 689, 871, 882, 1294, 1573, 2118, 2568 |
| HpaI | GTTAAC | 1 cut(s) | 993 |
| HpaII | CCGG | 8 cut(s) | 211, 216, 264, 293, 835, 862, 1045, 2254 |
| HphI | GGTGA | 6 cut(s) | 124, 382, 610, 910, 1753, 1940 |
| Hpy166II | GTNNAC | 9 cut(s) | 190, 591, 818, 993, 1027, 1679, 1687, 2117, 2441 |
| Hpy188I | TCNGA | 9 cut(s) | 568, 828, 887, 1246, 1369, 1740, 1938, 2071, 2398 |
| Hpy8I | GTNNAC | 9 cut(s) | 190, 591, 818, 993, 1027, 1679, 1687, 2117, 2441 |
| Hpy99I | CGWCG | 1 cut(s) | 1068 |
| HpyCH4III | ACNGT | 4 cut(s) | 394, 706, 822, 904 |
| HpyCH4IV | ACGT | 2 cut(s) | 1314, 1447 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 293, 314, 545, 611, 655, 980, 1898, 2173 |
| HpyF3I | CTNAG | 7 cut(s) | 471, 732, 825, 1711, 1816, 2070, 2564 |
| HpySE526I | ACGT | 2 cut(s) | 1314, 1447 |
| Hsp92I | GRCGYC | 1 cut(s) | 1447 |
| Kpn2I | TCCGGA | 1 cut(s) | 2253 |
| KroI | GCCGGC | 1 cut(s) | 1044 |
| KroNI | GCCGGC | 1 cut(s) | 1046 |
| Ksp22I | TGATCA | 2 cut(s) | 1422, 1758 |
| KspAI | GTTAAC | 1 cut(s) | 993 |
| Kzo9I | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| LmnI | GCTCC | 7 cut(s) | 206, 532, 577, 1087, 2035, 2173, 2376 |
| Lsp1109I | GCAGC | 8 cut(s) | 493, 592, 1694, 1913, 2162, 2179, 2380, 2603 |
| LweI | GCATC | 4 cut(s) | 433, 1066, 1731, 2601 |
| MabI | ACCWGGT | 1 cut(s) | 789 |
| MaeI | CTAG | 6 cut(s) | 582, 1584, 1641, 1658, 1722, 2187 |
| MaeII | ACGT | 2 cut(s) | 1314, 1447 |
| MaeIII | GTNAC | 8 cut(s) | 218, 310, 388, 785, 898, 1570, 1879, 2189 |
| MalI | GATC | 8 cut(s) | 480, 1424, 1625, 1760, 2250, 2306, 2346, 2627 |
| MbiI | CCGCTC | 2 cut(s) | 180, 1090 |
| MboI | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| MflI | RGATCY | 3 cut(s) | 1623, 2248, 2344 |
| MhlI | GDGCHC | 2 cut(s) | 1681, 2490 |
| MluCI | AATT | 9 cut(s) | 365, 493, 622, 960, 1000, 1362, 1893, 2145, 2671 |
| MlyI | GAGTC | 6 cut(s) | 386, 698, 1303, 1567, 2112, 2577 |
| MmeI | TCCRAC | 3 cut(s) | 91, 924, 2282 |
| Mph1103I | ATGCAT | 2 cut(s) | 976, 1797 |
| MroI | TCCGGA | 1 cut(s) | 2253 |
| MroNI | GCCGGC | 1 cut(s) | 1044 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1943, 2674 |
| MseI | TTAA | 6 cut(s) | 992, 1380, 1464, 1548, 1734, 2633 |
| MslI | CAYNNNNRTG | 6 cut(s) | 251, 354, 969, 1211, 1632, 2127 |
| MspA1I | CMGCKG | 1 cut(s) | 2170 |
| MspCI | CTTAAG | 1 cut(s) | 1547 |
| MspI | CCGG | 8 cut(s) | 211, 216, 264, 293, 835, 862, 1045, 2254 |
| MspR9I | CCNGG | 7 cut(s) | 211, 293, 791, 1765, 2092, 2292, 2535 |
| Mva1269I | GAATGC | 2 cut(s) | 1114, 1250 |
| MvaI | CCWGG | 5 cut(s) | 791, 1765, 2092, 2292, 2535 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 293, 314, 545, 611, 655, 980, 1898, 2173 |
| NaeI | GCCGGC | 1 cut(s) | 1046 |
| NciI | CCSGG | 2 cut(s) | 211, 293 |
| NcoI | CCATGG | 2 cut(s) | 1273, 2244 |
| NdeI | CATATG | 1 cut(s) | 2044 |
| NdeII | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| NgoMIV | GCCGGC | 1 cut(s) | 1044 |
| NlaIV | GGNNCC | 5 cut(s) | 579, 1542, 2089, 2175, 2651 |
| NmuCI | GTSAC | 7 cut(s) | 218, 310, 388, 785, 898, 1570, 2189 |
| NsiI | ATGCAT | 2 cut(s) | 976, 1797 |
| NspI | RCATGY | 5 cut(s) | 927, 1033, 1236, 1339, 1693 |
| NspV | TTCGAA | 1 cut(s) | 620 |
| PaeR7I | CTCGAG | 3 cut(s) | 754, 875, 1342 |
| PagI | TCATGA | 1 cut(s) | 1450 |
| PaqCI | CACCTGC | 1 cut(s) | 2075 |
| PceI | AGGCCT | 2 cut(s) | 1154, 1870 |
| PciI | ACATGT | 3 cut(s) | 1029, 1335, 1689 |
| PctI | GAATGC | 2 cut(s) | 1114, 1250 |
| PdiI | GCCGGC | 1 cut(s) | 1046 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1943, 2674 |
| PfeI | GAWTC | 2 cut(s) | 871, 882 |
| PinAI | ACCGGT | 1 cut(s) | 834 |
| PkrI | GCNGC | 8 cut(s) | 508, 607, 1709, 1903, 2152, 2169, 2370, 2593 |
| PleI | GAGTC | 6 cut(s) | 385, 697, 1302, 1567, 2112, 2576 |
| PpsI | GAGTC | 6 cut(s) | 385, 697, 1302, 1567, 2112, 2576 |
| Ppu21I | YACGTR | 1 cut(s) | 1315 |
| PscI | ACATGT | 3 cut(s) | 1029, 1335, 1689 |
| Psp6I | CCWGG | 5 cut(s) | 789, 1763, 2090, 2290, 2533 |
| PspFI | CCCAGC | 1 cut(s) | 2339 |
| PspGI | CCWGG | 5 cut(s) | 789, 1763, 2090, 2290, 2533 |
| PspN4I | GGNNCC | 5 cut(s) | 579, 1542, 2089, 2175, 2651 |
| PspPI | GGNCC | 5 cut(s) | 90, 213, 298, 316, 1159 |
| PspXI | VCTCGAGB | 1 cut(s) | 1342 |
| PstI | CTGCAG | 1 cut(s) | 2169 |
| PsuI | RGATCY | 3 cut(s) | 1623, 2248, 2344 |
| PvuII | CAGCTG | 1 cut(s) | 2170 |
| RsaI | GTAC | 4 cut(s) | 1313, 1340, 1516, 2442 |
| RsaNI | GTAC | 4 cut(s) | 1312, 1339, 1515, 2441 |
| RseI | CAYNNNNRTG | 6 cut(s) | 251, 354, 969, 1211, 1632, 2127 |
| Rsr2I | CGGWCCG | 1 cut(s) | 213 |
| RsrII | CGGWCCG | 1 cut(s) | 213 |
| SalI | GTCGAC | 2 cut(s) | 188, 2115 |
| SaqAI | TTAA | 6 cut(s) | 992, 1380, 1464, 1548, 1734, 2633 |
| SatI | GCNGC | 8 cut(s) | 507, 606, 1708, 1902, 2151, 2168, 2369, 2592 |
| Sau3AI | GATC | 8 cut(s) | 478, 1422, 1623, 1758, 2248, 2304, 2344, 2625 |
| Sau96I | GGNCC | 5 cut(s) | 90, 213, 298, 316, 1159 |
| SchI | GAGTC | 6 cut(s) | 386, 698, 1303, 1567, 2112, 2577 |
| ScrFI | CCNGG | 7 cut(s) | 211, 293, 791, 1765, 2092, 2292, 2535 |
| SduI | GDGCHC | 2 cut(s) | 1681, 2490 |
| SexAI | ACCWGGT | 1 cut(s) | 789 |
| SfaNI | GCATC | 4 cut(s) | 433, 1066, 1731, 2601 |
| SfcI | CTRYAG | 2 cut(s) | 1668, 2165 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 314 |
| Sfr274I | CTCGAG | 3 cut(s) | 754, 875, 1342 |
| SfuI | TTCGAA | 1 cut(s) | 620 |
| SinI | GGWCC | 4 cut(s) | 90, 213, 298, 1159 |
| SlaI | CTCGAG | 3 cut(s) | 754, 875, 1342 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 251, 354, 969, 1211, 1632, 2127 |
| SmlI | CTYRAG | 5 cut(s) | 302, 754, 875, 1342, 1547 |
| SmoI | CTYRAG | 5 cut(s) | 302, 754, 875, 1342, 1547 |
| Sse9I | AATT | 9 cut(s) | 365, 493, 622, 960, 1000, 1362, 1893, 2145, 2671 |
| SseBI | AGGCCT | 2 cut(s) | 1154, 1870 |
| SsiI | CCGC | 7 cut(s) | 18, 138, 178, 296, 1090, 1240, 1291 |
| SspMI | CTAG | 6 cut(s) | 582, 1584, 1641, 1658, 1722, 2187 |
| StuI | AGGCCT | 2 cut(s) | 1154, 1870 |
| StyD4I | CCNGG | 7 cut(s) | 209, 291, 789, 1763, 2090, 2290, 2533 |
| StyI | CCWWGG | 3 cut(s) | 1155, 1273, 2244 |
| TaaI | ACNGT | 4 cut(s) | 394, 706, 822, 904 |
| TaiI | ACGT | 2 cut(s) | 1317, 1450 |
| TasI | AATT | 9 cut(s) | 365, 493, 622, 960, 1000, 1362, 1893, 2145, 2671 |
| TatI | WGTACW | 2 cut(s) | 1338, 2440 |
| TfiI | GAWTC | 2 cut(s) | 871, 882 |
| Tru1I | TTAA | 6 cut(s) | 992, 1380, 1464, 1548, 1734, 2633 |
| Tru9I | TTAA | 6 cut(s) | 992, 1380, 1464, 1548, 1734, 2633 |
| TscAI | CASTG | 4 cut(s) | 825, 1021, 1432, 1686 |
| TseFI | GTSAC | 7 cut(s) | 218, 310, 388, 785, 898, 1570, 2189 |
| TseI | GCWGC | 8 cut(s) | 506, 605, 1707, 1901, 2150, 2167, 2368, 2591 |
| Tsp45I | GTSAC | 7 cut(s) | 218, 310, 388, 785, 898, 1570, 2189 |
| TspRI | CASTG | 4 cut(s) | 825, 1021, 1432, 1686 |
| Vha464I | CTTAAG | 1 cut(s) | 1547 |
| VneI | GTGCAC | 1 cut(s) | 1677 |
| VpaK11BI | GGWCC | 4 cut(s) | 90, 213, 298, 1159 |
| XapI | RAATTY | 6 cut(s) | 365, 493, 622, 960, 1000, 1362 |
| XbaI | TCTAGA | 1 cut(s) | 1721 |
| XceI | RCATGY | 5 cut(s) | 927, 1033, 1236, 1339, 1693 |
| XhoI | CTCGAG | 3 cut(s) | 754, 875, 1342 |
| XmiI | GTMKAC | 2 cut(s) | 189, 2116 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1943, 2674 |
| XspI | CTAG | 6 cut(s) | 582, 1584, 1641, 1658, 1722, 2187 |
| ZraI | GACGTC | 1 cut(s) | 1448 |
| Zsp2I | ATGCAT | 2 cut(s) | 976, 1797 |