ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 965 |
| Acc65I | GGTACC | 1 cut(s) | 753 |
| AccB1I | GGYRCC | 1 cut(s) | 753 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 908 |
| AccBSI | CCGCTC | 2 cut(s) | 114, 559 |
| AciI | CCGC | 8 cut(s) | 114, 202, 278, 379, 554, 559, 815, 929 |
| AclWI | GGATC | 4 cut(s) | 299, 312, 385, 880 |
| AcsI | RAATTY | 2 cut(s) | 318, 775 |
| AcyI | GRCGYC | 1 cut(s) | 962 |
| AfaI | GTAC | 4 cut(s) | 141, 511, 722, 755 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 46, 264, 701, 763, 764, 908 |
| AflII | CTTAAG | 1 cut(s) | 182 |
| AgeI | ACCGGT | 2 cut(s) | 257, 448 |
| AgsI | TTSAA | 5 cut(s) | 427, 489, 791, 917, 1291 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 35 |
| AjnI | CCWGG | 3 cut(s) | 82, 400, 1081 |
| AluBI | AGCT | 3 cut(s) | 416, 924, 948 |
| AluI | AGCT | 3 cut(s) | 416, 924, 948 |
| Alw21I | GWGCWC | 2 cut(s) | 297, 1128 |
| Alw26I | GTCTC | 4 cut(s) | 22, 248, 737, 901 |
| Alw44I | GTGCAC | 1 cut(s) | 293 |
| AlwI | GGATC | 4 cut(s) | 299, 312, 385, 880 |
| AoxI | GGCC | 4 cut(s) | 225, 1079, 1164, 1190 |
| ApaLI | GTGCAC | 1 cut(s) | 293 |
| ApoI | RAATTY | 2 cut(s) | 318, 775 |
| AsiGI | ACCGGT | 2 cut(s) | 257, 448 |
| Asp718I | GGTACC | 1 cut(s) | 753 |
| AspS9I | GGNCC | 6 cut(s) | 37, 225, 709, 853, 1079, 1174 |
| AsuC2I | CCSGG | 1 cut(s) | 1168 |
| AsuHPI | GGTGA | 1 cut(s) | 37 |
| AsuII | TTCGAA | 1 cut(s) | 1269 |
| AvaII | GGWCC | 4 cut(s) | 37, 709, 853, 1174 |
| BaeGI | GKGCMC | 1 cut(s) | 297 |
| BamHI | GGATCC | 1 cut(s) | 304 |
| BanI | GGYRCC | 1 cut(s) | 753 |
| BbsI | GAAGAC | 1 cut(s) | 1267 |
| Bbv12I | GWGCWC | 2 cut(s) | 297, 1128 |
| BccI | CCATC | 4 cut(s) | 236, 604, 721, 983 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 572, 606 |
| BciT130I | CCWGG | 3 cut(s) | 84, 402, 1083 |
| BcnI | CCSGG | 1 cut(s) | 1168 |
| BcoDI | GTCTC | 4 cut(s) | 22, 248, 737, 901 |
| BfaI | CTAG | 2 cut(s) | 1023, 1098 |
| BfmI | CTRYAG | 1 cut(s) | 411 |
| BfrI | CTTAAG | 1 cut(s) | 182 |
| BglII | AGATCT | 1 cut(s) | 175 |
| BlpI | GCTNAGC | 1 cut(s) | 1122 |
| Bme1390I | CCNGG | 4 cut(s) | 84, 402, 1083, 1168 |
| Bme18I | GGWCC | 4 cut(s) | 37, 709, 853, 1174 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 35 |
| BmgT120I | GGNCC | 6 cut(s) | 37, 225, 709, 853, 1079, 1174 |
| BmiI | GGNNCC | 3 cut(s) | 306, 755, 1176 |
| BmrFI | CCNGG | 4 cut(s) | 84, 402, 1083, 1168 |
| BmrI | ACTGGG | 2 cut(s) | 23, 963 |
| BmsI | GCATC | 1 cut(s) | 692 |
| BmuI | ACTGGG | 2 cut(s) | 23, 963 |
| BpiI | GAAGAC | 1 cut(s) | 1267 |
| BpmI | CTGGAG | 1 cut(s) | 545 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1122 |
| Bpu14I | TTCGAA | 1 cut(s) | 1269 |
| BpuMI | CCSGG | 1 cut(s) | 1168 |
| BsaBI | GATNNNNATC | 2 cut(s) | 489, 885 |
| BsaHI | GRCGYC | 1 cut(s) | 962 |
| BsaI | GGTCTC | 2 cut(s) | 248, 737 |
| BsaJI | CCNNGG | 3 cut(s) | 83, 122, 712 |
| BsaWI | WCCGGW | 3 cut(s) | 257, 307, 448 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 518, 548, 977, 1007 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 46, 264, 701, 763, 764, 908 |
| Bse118I | RCCGGY | 2 cut(s) | 257, 448 |
| Bse1I | ACTGG | 5 cut(s) | 18, 39, 517, 786, 958 |
| Bse8I | GATNNNNATC | 2 cut(s) | 489, 885 |
| BseBI | CCWGG | 3 cut(s) | 84, 402, 1083 |
| BseDI | CCNNGG | 3 cut(s) | 83, 122, 712 |
| BseGI | GGATG | 4 cut(s) | 82, 886, 994, 1091 |
| BseJI | GATNNNNATC | 2 cut(s) | 489, 885 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 46, 264, 701, 763, 764, 908 |
| BseNI | ACTGG | 5 cut(s) | 18, 39, 517, 786, 958 |
| BseRI | GAGGAG | 5 cut(s) | 62, 65, 266, 746, 1118 |
| BseSI | GKGCMC | 1 cut(s) | 297 |
| Bsh1285I | CGRYCG | 1 cut(s) | 262 |
| BshFI | GGCC | 4 cut(s) | 227, 1081, 1166, 1192 |
| BshNI | GGYRCC | 1 cut(s) | 753 |
| BshTI | ACCGGT | 2 cut(s) | 257, 448 |
| BsiEI | CGRYCG | 1 cut(s) | 262 |
| BsiHKAI | GWGCWC | 2 cut(s) | 297, 1128 |
| BsiSI | CCGG | 5 cut(s) | 258, 308, 394, 449, 1167 |
| BslFI | GGGAC | 3 cut(s) | 343, 780, 1160 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 46, 264, 701, 763, 764, 908 |
| BsmAI | GTCTC | 4 cut(s) | 22, 248, 737, 901 |
| BsmBI | CGTCTC | 1 cut(s) | 22 |
| BsmFI | GGGAC | 3 cut(s) | 343, 780, 1160 |
| BsmI | GAATGC | 1 cut(s) | 280 |
| BsnI | GGCC | 4 cut(s) | 227, 1081, 1166, 1192 |
| Bso31I | GGTCTC | 2 cut(s) | 248, 737 |
| Bsp119I | TTCGAA | 1 cut(s) | 1269 |
| Bsp1286I | GDGCHC | 2 cut(s) | 297, 1128 |
| Bsp143I | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1122 |
| Bsp19I | CCATGG | 1 cut(s) | 122 |
| BspACI | CCGC | 8 cut(s) | 114, 202, 278, 379, 554, 559, 815, 929 |
| BspANI | GGCC | 4 cut(s) | 227, 1081, 1166, 1192 |
| BspLI | GGNNCC | 3 cut(s) | 306, 755, 1176 |
| BspPI | GGATC | 4 cut(s) | 299, 312, 385, 880 |
| BspT104I | TTCGAA | 1 cut(s) | 1269 |
| BspT107I | GGYRCC | 1 cut(s) | 753 |
| BspTI | CTTAAG | 1 cut(s) | 182 |
| BspTNI | GGTCTC | 2 cut(s) | 248, 737 |
| BsrBI | CCGCTC | 2 cut(s) | 114, 559 |
| BsrFI | RCCGGY | 2 cut(s) | 257, 448 |
| BsrI | ACTGG | 5 cut(s) | 18, 39, 517, 786, 958 |
| BssAI | RCCGGY | 2 cut(s) | 257, 448 |
| BssECI | CCNNGG | 3 cut(s) | 83, 122, 712 |
| BssMI | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| BssNI | GRCGYC | 1 cut(s) | 962 |
| BssT1I | CCWWGG | 1 cut(s) | 122 |
| Bst2UI | CCWGG | 3 cut(s) | 84, 402, 1083 |
| Bst4CI | ACNGT | 4 cut(s) | 167, 467, 829, 970 |
| Bst6I | CTCTTC | 1 cut(s) | 243 |
| BstACI | GRCGYC | 1 cut(s) | 962 |
| BstAFI | CTTAAG | 1 cut(s) | 182 |
| BstBI | TTCGAA | 1 cut(s) | 1269 |
| BstC8I | GCNNGC | 4 cut(s) | 681, 819, 1028, 1119 |
| BstDSI | CCRYGG | 1 cut(s) | 122 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 44 |
| BstF5I | GGATG | 4 cut(s) | 82, 886, 994, 1091 |
| BstKTI | GATC | 7 cut(s) | 66, 153, 178, 307, 393, 875, 1185 |
| BstMAI | GTCTC | 4 cut(s) | 22, 248, 737, 901 |
| BstMBI | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| BstMCI | CGRYCG | 1 cut(s) | 262 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 155, 580, 1123 |
| BstNI | CCWGG | 3 cut(s) | 84, 402, 1083 |
| BstNSI | RCATGY | 1 cut(s) | 896 |
| BstSCI | CCNGG | 4 cut(s) | 82, 400, 1081, 1166 |
| BstSFI | CTRYAG | 1 cut(s) | 411 |
| BstSLI | GKGCMC | 1 cut(s) | 297 |
| BstV2I | GAAGAC | 1 cut(s) | 1267 |
| BstX2I | RGATCY | 3 cut(s) | 175, 304, 872 |
| BstYI | RGATCY | 3 cut(s) | 175, 304, 872 |
| BsuRI | GGCC | 4 cut(s) | 227, 1081, 1166, 1192 |
| BtgI | CCRYGG | 1 cut(s) | 122 |
| BtgZI | GCGATG | 1 cut(s) | 623 |
| BtsCI | GGATG | 4 cut(s) | 82, 886, 994, 1091 |
| BtsIMutI | CAGTG | 1 cut(s) | 371 |
| Cac8I | GCNNGC | 4 cut(s) | 681, 819, 1028, 1119 |
| Cfr10I | RCCGGY | 2 cut(s) | 257, 448 |
| Cfr13I | GGNCC | 6 cut(s) | 37, 225, 709, 853, 1079, 1174 |
| Csp6I | GTAC | 4 cut(s) | 140, 510, 721, 754 |
| CspAI | ACCGGT | 2 cut(s) | 257, 448 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 488, 523 |
| CviAII | CATG | 7 cut(s) | 123, 244, 298, 482, 517, 706, 893 |
| CviQI | GTAC | 4 cut(s) | 140, 510, 721, 754 |
| DpnI | GATC | 7 cut(s) | 65, 152, 177, 306, 392, 874, 1184 |
| DpnII | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| DriI | GACNNNNNGTC | 1 cut(s) | 35 |
| Eam1104I | CTCTTC | 1 cut(s) | 243 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 35 |
| EarI | CTCTTC | 1 cut(s) | 243 |
| EciI | GGCGGA | 1 cut(s) | 394 |
| Eco130I | CCWWGG | 1 cut(s) | 122 |
| Eco147I | AGGCCT | 1 cut(s) | 1192 |
| Eco31I | GGTCTC | 2 cut(s) | 248, 737 |
| Eco47I | GGWCC | 4 cut(s) | 37, 709, 853, 1174 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 44 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1174 |
| EcoRII | CCWGG | 3 cut(s) | 82, 400, 1081 |
| EcoT14I | CCWWGG | 1 cut(s) | 122 |
| ErhI | CCWWGG | 1 cut(s) | 122 |
| Esp3I | CGTCTC | 1 cut(s) | 22 |
| FaeI | CATG | 7 cut(s) | 126, 247, 301, 485, 520, 709, 896 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 165, 197 |
| FaqI | GGGAC | 3 cut(s) | 343, 780, 1160 |
| FatI | CATG | 7 cut(s) | 122, 243, 297, 481, 516, 705, 892 |
| FauI | CCCGC | 1 cut(s) | 936 |
| FokI | GGATG | 4 cut(s) | 89, 893, 1001, 1098 |
| FspBI | CTAG | 2 cut(s) | 1023, 1098 |
| GsuI | CTGGAG | 1 cut(s) | 545 |
| HaeIII | GGCC | 4 cut(s) | 227, 1081, 1166, 1192 |
| HapII | CCGG | 5 cut(s) | 258, 308, 394, 449, 1167 |
| Hin1I | GRCGYC | 1 cut(s) | 962 |
| Hin1II | CATG | 7 cut(s) | 126, 247, 301, 485, 520, 709, 896 |
| HincII | GTYRAC | 2 cut(s) | 313, 966 |
| HindII | GTYRAC | 2 cut(s) | 313, 966 |
| HinfI | GANTC | 4 cut(s) | 485, 520, 636, 1094 |
| HpaII | CCGG | 5 cut(s) | 258, 308, 394, 449, 1167 |
| HphI | GGTGA | 1 cut(s) | 37 |
| Hpy166II | GTNNAC | 3 cut(s) | 295, 313, 966 |
| Hpy188III | TCNNGA | 3 cut(s) | 524, 806, 1279 |
| Hpy8I | GTNNAC | 3 cut(s) | 295, 313, 966 |
| Hpy99I | CGWCG | 1 cut(s) | 752 |
| HpyAV | CCTTC | 6 cut(s) | 334, 556, 598, 623, 844, 1165 |
| HpyCH4III | ACNGT | 4 cut(s) | 167, 467, 829, 970 |
| HpyCH4IV | ACGT | 1 cut(s) | 962 |
| HpyCH4V | TGCA | 6 cut(s) | 295, 386, 679, 892, 937, 1232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 155, 580, 1123 |
| HpySE526I | ACGT | 1 cut(s) | 962 |
| Hsp92I | GRCGYC | 1 cut(s) | 962 |
| Hsp92II | CATG | 7 cut(s) | 126, 247, 301, 485, 520, 709, 896 |
| KpnI | GGTACC | 1 cut(s) | 757 |
| Kzo9I | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| LmnI | GCTCC | 2 cut(s) | 556, 580 |
| LweI | GCATC | 1 cut(s) | 692 |
| MaeI | CTAG | 2 cut(s) | 1023, 1098 |
| MaeII | ACGT | 1 cut(s) | 962 |
| MaeIII | GTNAC | 1 cut(s) | 444 |
| MalI | GATC | 7 cut(s) | 65, 152, 177, 306, 392, 874, 1184 |
| MbiI | CCGCTC | 2 cut(s) | 114, 559 |
| MboI | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| MboII | GAAGA | 4 cut(s) | 185, 199, 260, 1267 |
| MflI | RGATCY | 3 cut(s) | 175, 304, 872 |
| MhlI | GDGCHC | 2 cut(s) | 297, 1128 |
| MluCI | AATT | 7 cut(s) | 318, 428, 760, 775, 809, 862, 903 |
| MlyI | GAGTC | 1 cut(s) | 1088 |
| MmeI | TCCRAC | 4 cut(s) | 71, 242, 1050, 1136 |
| MseI | TTAA | 3 cut(s) | 132, 183, 795 |
| MspCI | CTTAAG | 1 cut(s) | 182 |
| MspI | CCGG | 5 cut(s) | 258, 308, 394, 449, 1167 |
| MspR9I | CCNGG | 4 cut(s) | 84, 402, 1083, 1168 |
| Mva1269I | GAATGC | 1 cut(s) | 280 |
| MvaI | CCWGG | 3 cut(s) | 84, 402, 1083 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 155, 580, 1123 |
| NciI | CCSGG | 1 cut(s) | 1168 |
| NcoI | CCATGG | 1 cut(s) | 122 |
| NdeII | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| NlaIII | CATG | 7 cut(s) | 126, 247, 301, 485, 520, 709, 896 |
| NlaIV | GGNNCC | 3 cut(s) | 306, 755, 1176 |
| NspI | RCATGY | 1 cut(s) | 896 |
| NspV | TTCGAA | 1 cut(s) | 1269 |
| PceI | AGGCCT | 1 cut(s) | 1192 |
| PctI | GAATGC | 1 cut(s) | 280 |
| PfeI | GAWTC | 3 cut(s) | 485, 520, 636 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 908 |
| PfoI | TCCNGGA | 1 cut(s) | 400 |
| PinAI | ACCGGT | 2 cut(s) | 257, 448 |
| PleI | GAGTC | 1 cut(s) | 1088 |
| PpsI | GAGTC | 1 cut(s) | 1088 |
| PpuMI | RGGWCCY | 1 cut(s) | 1174 |
| Psp5II | RGGWCCY | 1 cut(s) | 1174 |
| Psp6I | CCWGG | 3 cut(s) | 82, 400, 1081 |
| PspGI | CCWGG | 3 cut(s) | 82, 400, 1081 |
| PspN4I | GGNNCC | 3 cut(s) | 306, 755, 1176 |
| PspPI | GGNCC | 6 cut(s) | 37, 225, 709, 853, 1079, 1174 |
| PspPPI | RGGWCCY | 1 cut(s) | 1174 |
| PsuI | RGATCY | 3 cut(s) | 175, 304, 872 |
| RsaI | GTAC | 4 cut(s) | 141, 511, 722, 755 |
| RsaNI | GTAC | 4 cut(s) | 140, 510, 721, 754 |
| SaqAI | TTAA | 3 cut(s) | 132, 183, 795 |
| Sau3AI | GATC | 7 cut(s) | 63, 150, 175, 304, 390, 872, 1182 |
| Sau96I | GGNCC | 6 cut(s) | 37, 225, 709, 853, 1079, 1174 |
| SchI | GAGTC | 1 cut(s) | 1088 |
| ScrFI | CCNGG | 4 cut(s) | 84, 402, 1083, 1168 |
| SduI | GDGCHC | 2 cut(s) | 297, 1128 |
| SfaNI | GCATC | 1 cut(s) | 692 |
| SfcI | CTRYAG | 1 cut(s) | 411 |
| SfuI | TTCGAA | 1 cut(s) | 1269 |
| SinI | GGWCC | 4 cut(s) | 37, 709, 853, 1174 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 7 cut(s) | 318, 428, 760, 775, 809, 862, 903 |
| SseBI | AGGCCT | 1 cut(s) | 1192 |
| SsiI | CCGC | 8 cut(s) | 114, 202, 278, 379, 554, 559, 815, 929 |
| SspMI | CTAG | 2 cut(s) | 1023, 1098 |
| StuI | AGGCCT | 1 cut(s) | 1192 |
| StyD4I | CCNGG | 4 cut(s) | 82, 400, 1081, 1166 |
| StyI | CCWWGG | 1 cut(s) | 122 |
| TaaI | ACNGT | 4 cut(s) | 167, 467, 829, 970 |
| TaiI | ACGT | 1 cut(s) | 965 |
| TaqI | TCGA | 3 cut(s) | 686, 944, 1269 |
| TaqII | GACCGA | 1 cut(s) | 761 |
| TasI | AATT | 7 cut(s) | 318, 428, 760, 775, 809, 862, 903 |
| TatI | WGTACW | 1 cut(s) | 509 |
| TfiI | GAWTC | 3 cut(s) | 485, 520, 636 |
| Tru1I | TTAA | 3 cut(s) | 132, 183, 795 |
| Tru9I | TTAA | 3 cut(s) | 132, 183, 795 |
| TscAI | CASTG | 1 cut(s) | 378 |
| TspDTI | ATGAA | 3 cut(s) | 93, 353, 491 |
| TspRI | CASTG | 1 cut(s) | 378 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 908 |
| Vha464I | CTTAAG | 1 cut(s) | 182 |
| VneI | GTGCAC | 1 cut(s) | 293 |
| VpaK11BI | GGWCC | 4 cut(s) | 37, 709, 853, 1174 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 44 |
| XapI | RAATTY | 2 cut(s) | 318, 775 |
| XceI | RCATGY | 1 cut(s) | 896 |
| XspI | CTAG | 2 cut(s) | 1023, 1098 |
| ZraI | GACGTC | 1 cut(s) | 963 |