FvH4_1g27352

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
19057900 .. 19059944
2045 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g27352.t1

Sequence Viewer

Length: 1431 bp
ATGACTCATTCTGGTAATATAACAGATGAATTACAAATGGTAATATCAGTGACAACAGTCTACAGTAAGAGGGCAAAGAGTCCGACGAGTATAGTTGCGGTGGAGGAAGCCGACCTCGATCCGGTGTTGGAGCTTTCATTGCCTCATCATGCTGCAGGGTCGACATTGTCGAAGCGACATAAGGTTGCCTTGGGAGTCCTTAGAGGCGCAGACTCTGTTGTTGATGTGCCACTGGATACGGCTGGTTTTTGGGTTCAGATTCACAAGGTTCCGTTTAAATATCTTAGTGCTGAGGTAGCTGAAGATATTGGATCTGAGGTGGGGCAAATTATTGACGGGAAACAAGGTAGAGAGGCAGATCGAGTGGGAACTTTTCTCAGGGCCAGGGTGCGGTTGAACTTCGTGCAGCCTTTACTGAGGAAGTCGAAGATTGACTTTCCAGGAGTTGGGTCTAGAGTGGTGGAATTTCAGTATGAAAGATTGCCAGAGTTTTGCCAAGAGTGTGGGATGATTGGTCACCCTACGAGAGTCTGTGATGACTTACTGAAGACAAGGGGGAAGAGGGAGGAGGATAGACCATATCGGCTTGCTCTTCGTGCTGAGCATGACATTCATGGGCGAAGAATTCGGGAGAGAATGTACCGCAGTCGTTTTGGGGATGGTGGAGGTGAGAGTGACCATAGTGATTCGGCTGGTGGCTCCTTCAATTACACTCAGTCTGGAGAAGAGGATAATAGACGACAACAAACTGCCGCAAGGGAGAATGGGGGTAGAAGAAGTTTCCAGTCGCTGAGTGATAACTCCTCAACTGTATCATTCCCGCTGCAAATTGAGGGTCCAGGTCAGGATACGGCTTCCTCACCAGTGAAGAAAGGGAGTCACAGTACTAGAGTTGATATTGTGGAAGTGGAGGAGAAACGATTAGAAGAGCTGGATATGGTTTTGTATACAAGGCCGGCTGTCGATAGGGACTCGGATGAGGTGATAACTATTGGAAATGTTTCTGAAATTTCTGAGTGCACAGTGACAGGTGCGGCAGTCCAGGGGATGGTCCAGTCTCCGGTACAAGTTTTAAAGTGTGATGCGGTAAAACGTTTGGGTATGATGTTTAAGTCAGCATTTGGTGATGGTTCTGTGGAAGGTTTTAGTGGTTGTTTTCAAGCTATGGAACATGTAGTTGATACAACTAGTGGCCTTTCTGCTGCTGGGAGGAATAGGAAAGACAGAAGACTTATTTCAGTTTCGGCGAAGCGAAAACTGTTGTTTGCAGGGAAGACAGAGGAGATTGCCCCAATGGATGTGAGTGGTAAACGGAAACTGGAATTGAATATTTTCAACGATAATGAGGAACGATCAACAAAGAAGGTGATACTGGAAAATGGTGTCCCTGAAGTGGTGGAAGCAGCGAGGCTGCCCCACCACGAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

477

Amino Acids

52.52

Weight (kDa)

6.27

Isoelectric Point (pI)

49.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 134 - 179 1.8e-12 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000022)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18231 FvH4_1g19111 FvH4_1g25603 FvH4_1g25612 FvH4_1g27352 FvH4_2g10730 FvH4_2g13120 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g05891 FvH4_3g22921 FvH4_3g23592 FvH4_3g23822 FvH4_5g04250 FvH4_5g23151 FvH4_5g37180 FvH4_6g29732 FvH4_7g18821 FvH4_7g32131
prunus_persica Prupe.1G197400_v2.0.a1 Prupe.2G026100_v2.0.a1 Prupe.2G059100_v2.0.a1 Prupe.2G099000_v2.0.a1 Prupe.3G105700_v2.0.a1 Prupe.3G153700_v2.0.a1 Prupe.3G196300_v2.0.a1 Prupe.3G237600_v2.0.a1 Prupe.6G195300_v2.0.a1 Prupe.7G028300_v2.0.a1 Prupe.7G030300_v2.0.a1 Prupe.7G035300_v2.0.a1 Prupe.7G053200_v2.0.a1 Prupe.7G053800_v2.0.a1
pyrus_communis pycom04g19620 pycom10g05030
rosa_chinensis RchiOBHm_Chr3g0468751 RchiOBHm_Chr4g0412211 RchiOBHm_Chr4g0435351 RchiOBHm_Chr4g0435361
rosa_laevigata RLG00000000658 RLG00000004042 RLG00000004625 RLG00000005981 RLG00000007988 RLG00000008105 RLG00000009047 RLG00000011402 RLG00000011415 RLG00000012178 RLG00000012218 RLG00000012251 RLG00000012412 RLG00000012647 RLG00000013541 RLG00000013547 RLG00000013548 RLG00000014198 RLG00000015054 RLG00000015221 RLG00000018021 RLG00000018022 RLG00000018285 RLG00000018569 RLG00000018897 RLG00000019206 RLG00000021674 RLG00000022785 RLG00000023709 RLG00000030006 RLG00000030958 RLG00000032025 RLG00000032026 RLG00000032326 RLG00000032591 RLG00000032797 RLG00000033436 RLG00000033536 RLG00000033572 RLG00000033974 RLG00000034193 RLG00000034718 RLG00000034721 RLG00000035117 RLG00000035348 RLG00000035349 RLG00000035579 RLG00000035708 RLG00000035775 RLG00000036281 RLG00000036638 RLG00000036661 RLG00000036836
rosa_multiflora Rmu_co8092304.1_g000001 Rmu_co8122208.1_g000001 Rmu_co8124144.1_g000001 Rmu_co8176690.1_g000001 Rmu_co8198582.1_g000001 Rmu_co8290821.1_g000001 Rmu_co8299115.1_g000001 Rmu_co8362595.1_g000001 Rmu_co8372359.1_g000001 Rmu_co8402715.1_g000001 Rmu_sc0000077.1_g000014 Rmu_sc0000105.1_g000001 Rmu_sc0000156.1_g000012 Rmu_sc0000338.1_g000021 Rmu_sc0000381.1_g000006 Rmu_sc0000545.1_g000025 Rmu_sc0000556.1_g000013 Rmu_sc0000556.1_g000014 Rmu_sc0000565.1_g000001 Rmu_sc0000580.1_g000005 Rmu_sc0000580.1_g000124 Rmu_sc0000595.1_g000001 Rmu_sc0000608.1_g000006 Rmu_sc0000744.1_g000086 Rmu_sc0000776.1_g000041 Rmu_sc0000791.1_g000060 Rmu_sc0000791.1_g000072 Rmu_sc0000796.1_g000014 Rmu_sc0000876.1_g000019 Rmu_sc0000892.1_g000009 Rmu_sc0000898.1_g000087 Rmu_sc0000948.1_g000026 Rmu_sc0001001.1_g000005 Rmu_sc0001148.1_g000023 Rmu_sc0001148.1_g000027 Rmu_sc0001161.1_g000008 Rmu_sc0001215.1_g000016 Rmu_sc0001251.1_g000019 Rmu_sc0001264.1_g000018 Rmu_sc0001291.1_g000031 Rmu_sc0001293.1_g000015 Rmu_sc0001323.1_g000008 Rmu_sc0001334.1_g000008 Rmu_sc0001356.1_g000001 Rmu_sc0001356.1_g000002 Rmu_sc0001382.1_g000002 Rmu_sc0001436.1_g000012 Rmu_sc0001647.1_g000014 Rmu_sc0001665.1_g000036 Rmu_sc0001698.1_g000013 Rmu_sc0001711.1_g000028 Rmu_sc0001767.1_g000012 Rmu_sc0001836.1_g000042 Rmu_sc0001911.1_g000021 Rmu_sc0001939.1_g000021 Rmu_sc0001940.1_g000012 Rmu_sc0002036.1_g000003 Rmu_sc0002138.1_g000004 Rmu_sc0002154.1_g000008 Rmu_sc0002267.1_g000004 Rmu_sc0002267.1_g000007 Rmu_sc0002451.1_g000016 Rmu_sc0002516.1_g000008 Rmu_sc0002530.1_g000008 Rmu_sc0002571.1_g000012 Rmu_sc0002667.1_g000021 Rmu_sc0002695.1_g000004 Rmu_sc0002784.1_g000031 Rmu_sc0002833.1_g000023 Rmu_sc0002848.1_g000014 Rmu_sc0002945.1_g000003 Rmu_sc0002952.1_g000020 Rmu_sc0002960.1_g000008 Rmu_sc0003060.1_g000001 Rmu_sc0003102.1_g000001 Rmu_sc0003303.1_g000015 Rmu_sc0003354.1_g000011 Rmu_sc0003387.1_g000006 Rmu_sc0003778.1_g000041 Rmu_sc0003859.1_g000045 Rmu_sc0003878.1_g000026 Rmu_sc0004118.1_g000001 Rmu_sc0004212.1_g000008 Rmu_sc0004482.1_g000017 Rmu_sc0004482.1_g000023 Rmu_sc0004618.1_g000036 Rmu_sc0004618.1_g000037 Rmu_sc0004744.1_g000010 Rmu_sc0004762.1_g000009 Rmu_sc0004965.1_g000002 Rmu_sc0004967.1_g000001 Rmu_sc0005173.1_g000014 Rmu_sc0005431.1_g000011 Rmu_sc0005431.1_g000012 Rmu_sc0005431.1_g000022 Rmu_sc0005861.1_g000010 Rmu_sc0005861.1_g000011 Rmu_sc0005913.1_g000019 Rmu_sc0006124.1_g000018 Rmu_sc0006318.1_g000025 Rmu_sc0006616.1_g000012 Rmu_sc0006616.1_g000013 Rmu_sc0006691.1_g000007 Rmu_sc0006776.1_g000007 Rmu_sc0006824.1_g000022 Rmu_sc0006828.1_g000004 Rmu_sc0007059.1_g000005 Rmu_sc0007069.1_g000026 Rmu_sc0007074.1_g000002 Rmu_sc0007081.1_g000002 Rmu_sc0007785.1_g000004 Rmu_sc0007848.1_g000033 Rmu_sc0007883.1_g000007 Rmu_sc0008002.1_g000009 Rmu_sc0008317.1_g000011 Rmu_sc0009180.1_g000007 Rmu_sc0009185.1_g000018 Rmu_sc0010368.1_g000010 Rmu_sc0011733.1_g000008 Rmu_sc0013073.1_g000004 Rmu_sc0013075.1_g000005 Rmu_sc0013280.1_g000003 Rmu_sc0014404.1_g000012 Rmu_sc0014510.1_g000006 Rmu_sc0017005.1_g000006 Rmu_sc0017051.1_g000001 Rmu_sc0017086.1_g000004 Rmu_sc0017394.1_g000004 Rmu_sc0017563.1_g000001 Rmu_sc0018393.1_g000003 Rmu_sc0020047.1_g000001 Rmu_sc0024008.1_g000003 Rmu_sc0026560.1_g000002 Rmu_sc0027933.1_g000001 Rmu_sc0027934.1_g000001 Rmu_sc0029145.1_g000001 Rmu_sc0030686.1_g000002 Rmu_sc0034848.1_g000001 Rmu_sc0036896.1_g000001 Rmu_sc0036897.1_g000001 Rmu_sc0038027.1_g000001 Rmu_sc0041267.1_g000001 Rmu_sc0041948.1_g000001 Rmu_ssc0000011.1_g000021 Rmu_ssc0000019.1_g000009 Rmu_ssc0000127.1_g000005 Rmu_ssc0000135.1_g000011 Rmu_ssc0000264.1_g000029 Rmu_ssc0000432.1_g000047
rosa_roxburghii Rroxscaffold_157G00438300 Rroxscaffold_176G00431540 Rroxscaffold_1G00032330 Rroxscaffold_1G00037330 Rroxscaffold_1G00039780 Rroxscaffold_1G00044330 Rroxscaffold_1G00059840 Rroxscaffold_1G00061850 Rroxscaffold_1G00067020 Rroxscaffold_2G00094770 Rroxscaffold_2G00097970 Rroxscaffold_2G00111380 Rroxscaffold_2G00114430 Rroxscaffold_2G00118370 Rroxscaffold_3G00244430 Rroxscaffold_3G00245450 Rroxscaffold_3G00252790 Rroxscaffold_3G00252800 Rroxscaffold_3G00253930 Rroxscaffold_3G00263900 Rroxscaffold_3G00266650 Rroxscaffold_4G00283310 Rroxscaffold_4G00285100 Rroxscaffold_4G00287050 Rroxscaffold_4G00293050 Rroxscaffold_4G00311960 Rroxscaffold_4G00317580 Rroxscaffold_4G00318840 Rroxscaffold_4G00330920 Rroxscaffold_5G00333040 Rroxscaffold_5G00338150 Rroxscaffold_5G00353130 Rroxscaffold_5G00362630 Rroxscaffold_5G00373970 Rroxscaffold_6G00398030 Rroxscaffold_6G00403960 Rroxscaffold_6G00404110 Rroxscaffold_6G00408470 Rroxscaffold_6G00411860 Rroxscaffold_7G00187970 Rroxscaffold_7G00190970 Rroxscaffold_7G00196980 Rroxscaffold_7G00203070 Rroxscaffold_8G00436830 Rroxscaffold_8G00436840
rosa_rugosa Rorug01G0001300 Rorug01G0273100 Rorug02G0195100 Rorug02G0231300 Rorug02G0441000 Rorug02G0513500 Rorug02G0654500 Rorug03G0189500 Rorug03G0355500 Rorug04G0026700 Rorug04G0103000 Rorug04G0128300 Rorug04G0134700 Rorug04G0203100 Rorug05G0010600 Rorug05G0010700 Rorug05G0010800 Rorug05G0142000 Rorug05G0143200 Rorug05G0158300 Rorug05G0207700 Rorug05G0235800 Rorug06G0014100 Rorug06G0041600 Rorug06G0170300 Rorug07G0106500 Rorug07G0129200 Rorug07G0151100 Rorug07G0210500 Rorug07G0310600
rosa_samantha Rh1AG215600 Rh1AG231300 Rh1BG029100 Rh1BG029200 Rh1BG029300 Rh1BG061600 Rh1BG089300 Rh1BG103900 Rh1BG119800 Rh1BG126600 Rh1BG172800 Rh1BG305900 Rh1CG019500 Rh1CG061200 Rh1CG178900 Rh1CG200100 Rh1CG215200 Rh1DG008800 Rh1DG065300 Rh1DG102700 Rh1DG161600 Rh1DG202700 Rh1DG228800 Rh1DG338100 Rh2AG031400 Rh2AG031500 Rh2AG031600 Rh2AG239800 Rh2AG352400 Rh2AG420700 Rh2AG468100 Rh2BG064800 Rh2BG355600 Rh2BG563200 Rh2CG031200 Rh2CG031300 Rh2CG031400 Rh2CG066300 Rh2CG202000 Rh2CG217900 Rh2CG407600 Rh2CG407700 Rh2CG563800 Rh2DG016500 Rh2DG031100 Rh2DG073700 Rh2DG221200 Rh2DG247700 Rh2DG317700 Rh2DG320500 Rh2DG572500 Rh3BG168200 Rh3CG044300 Rh3CG234500 Rh3CG234600 Rh3CG280700 Rh3CG280800 Rh3CG315800 Rh3DG276800 Rh4AG055600 Rh4AG070200 Rh4AG076400 Rh4AG207200 Rh4AG215300 Rh4BG017000 Rh4BG035100 Rh4BG053700 Rh4BG068000 Rh4BG083600 Rh4BG085100 Rh4BG085400 Rh4BG085500 Rh4BG129100 Rh4BG226900 Rh4CG075900 Rh4CG082300 Rh5AG085800 Rh5AG105400 Rh5AG111000 Rh5AG310300 Rh5AG517300 Rh5AG518000 Rh5BG101600 Rh5BG101700 Rh5BG136100 Rh5BG192800 Rh5BG457600 Rh5BG535800 Rh5CG113500 Rh5CG166800 Rh5CG221300 Rh5CG284500 Rh5CG284600 Rh5CG300000 Rh5CG309400 Rh5CG380000 Rh5DG053700 Rh5DG100200 Rh5DG123700 Rh5DG123800 Rh5DG242500 Rh5DG273200 Rh5DG284200 Rh5DG329000 Rh5DG399400 Rh5DG412700 Rh5DG428300 Rh5DG472200 Rh5DG472300 Rh6AG027400 Rh6AG087000 Rh6AG088900 Rh6AG135900 Rh6AG162100 Rh6AG169800 Rh6AG172500 Rh6AG341600 Rh6AG417800 Rh6BG023500 Rh6BG229100 Rh6BG381600 Rh6BG390400 Rh6CG160200 Rh6CG190500 Rh6CG322500 Rh6DG073200 Rh6DG188800 Rh6DG308300 Rh6DG320800 Rh7AG010500 Rh7AG225800 Rh7AG248100 Rh7AG248200 Rh7AG303700 Rh7AG320800 Rh7AG331700 Rh7AG428300 Rh7AG466200 Rh7BG098200 Rh7BG107900 Rh7BG297200 Rh7BG358100 Rh7CG255500 Rh7CG263600 Rh7CG281500 Rh7CG349100 Rh7DG091300 Rh7DG114500 Rh7DG254200 Rh7DG316800 Rh7DG378500
rosa_wichuraiana Rw0G006200 Rw0G010380 Rw0G018260 Rw1G016250 Rw1G017620 Rw1G018280 Rw1G018390 Rw2G002470 Rw2G008750 Rw2G028260 Rw2G033640 Rw2G033840 Rw4G000510 Rw4G003170 Rw4G004830 Rw4G006220 Rw4G010290 Rw5G009180 Rw5G009680 Rw5G015760 Rw5G017730 Rw5G021440 Rw5G035270 Rw5G042770 Rw6G002880 Rw6G003090 Rw6G003400 Rw6G007620 Rw6G011710 Rw6G017000 Rw6G029770 Rw7G009660 Rw7G020940 Rw7G032200 Rw7G034460 Rw7G034840 Rw7G038460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 446, 1048
AccI GTMKAC 3 cut(s) 60, 161, 947
AciI CCGC 7 cut(s) 98, 391, 643, 753, 821, 1034, 1085
AclI AACGTT 1 cut(s) 1093
AclWI GGATC 2 cut(s) 113, 319
AcsI RAATTY 3 cut(s) 464, 624, 1008
AcuI CTGAAG 3 cut(s) 321, 566, 1410
AfaI GTAC 3 cut(s) 641, 886, 1065
AfiI CCNNNNNNNGG 6 cut(s) 121, 390, 446, 1048, 1060, 1393
AflIII ACRYGT 1 cut(s) 1171
AgsI TTSAA 5 cut(s) 397, 706, 1160, 1327, 1336
AhlI ACTAGT 1 cut(s) 1187
AjnI CCWGG 4 cut(s) 383, 439, 838, 1041
AluBI AGCT 4 cut(s) 133, 299, 931, 1163
AluI AGCT 4 cut(s) 133, 299, 931, 1163
Alw21I GWGCWC 1 cut(s) 1022
Alw26I GTCTC 1 cut(s) 1062
Alw44I GTGCAC 1 cut(s) 1018
AlwI GGATC 2 cut(s) 113, 319
AlwNI CAGNNNCTG 2 cut(s) 215, 790
AoxI GGCC 3 cut(s) 381, 953, 1192
ApaLI GTGCAC 1 cut(s) 1018
ApeKI GCWGC 6 cut(s) 152, 406, 823, 1202, 1403, 1411
ApoI RAATTY 3 cut(s) 464, 624, 1008
ArsI GACNNNNNNTTYG 2 cut(s) 820, 852
Asp700I GAANNNNTTC 2 cut(s) 1000, 1331
AspLEI GCGC 1 cut(s) 209
AspS9I GGNCC 3 cut(s) 381, 836, 1051
AsuHPI GGTGA 6 cut(s) 509, 680, 852, 994, 1136, 1378
AvaII GGWCC 2 cut(s) 836, 1051
BaeGI GKGCMC 1 cut(s) 1022
BauI CACGAG 1 cut(s) 1421
BbsI GAAGAC 3 cut(s) 554, 1234, 1280
Bbv12I GWGCWC 1 cut(s) 1022
BbvCI CCTCAGC 1 cut(s) 291
BbvI GCAGC 6 cut(s) 139, 418, 810, 1189, 1398, 1415
BccI CCATC 3 cut(s) 653, 1042, 1121
BceAI ACGGC 2 cut(s) 255, 867
BciT130I CCWGG 4 cut(s) 385, 441, 840, 1043
BciVI GTATCC 2 cut(s) 229, 841
BcoDI GTCTC 1 cut(s) 1062
BcuI ACTAGT 1 cut(s) 1187
BfaI CTAG 3 cut(s) 453, 888, 1188
BfmI CTRYAG 2 cut(s) 61, 153
BfuI GTATCC 2 cut(s) 229, 841
BisI GCNGC 8 cut(s) 153, 407, 753, 824, 1035, 1203, 1404, 1412
BlpI GCTNAGC 1 cut(s) 600
BlsI GCNGC 8 cut(s) 154, 408, 754, 825, 1036, 1204, 1405, 1413
BmcAI AGTACT 1 cut(s) 886
Bme1390I CCNGG 4 cut(s) 385, 441, 840, 1043
Bme18I GGWCC 2 cut(s) 836, 1051
BmgT120I GGNCC 3 cut(s) 381, 836, 1051
BmiI GGNNCC 3 cut(s) 270, 700, 837
BmrFI CCNGG 4 cut(s) 385, 441, 840, 1043
BmsI GCATC 1 cut(s) 1072
BoxI GACNNNNGTC 1 cut(s) 56
BpiI GAAGAC 3 cut(s) 554, 1234, 1280
BpmI CTGGAG 1 cut(s) 741
Bpu10I CCTNAGC 1 cut(s) 291
Bpu1102I GCTNAGC 1 cut(s) 600
BsaJI CCNNGG 3 cut(s) 189, 384, 1042
BsaWI WCCGGW 2 cut(s) 121, 1060
BsaXI ACNNNNNCTCC 4 cut(s) 623, 653, 868, 898
Bsc4I CCNNNNNNNGG 6 cut(s) 121, 390, 446, 1048, 1060, 1393
Bse118I RCCGGY 1 cut(s) 955
Bse1I ACTGG 6 cut(s) 237, 784, 863, 1054, 1323, 1377
Bse3DI GCAATG 1 cut(s) 137
BseBI CCWGG 4 cut(s) 385, 441, 840, 1043
BseDI CCNNGG 3 cut(s) 189, 384, 1042
BseGI GGATG 5 cut(s) 513, 664, 982, 1053, 1303
BseLI CCNNNNNNNGG 6 cut(s) 121, 390, 446, 1048, 1060, 1393
BseMI GCAATG 1 cut(s) 137
BseMII CTCAG 8 cut(s) 282, 306, 391, 407, 591, 728, 782, 1005
BseNI ACTGG 6 cut(s) 237, 784, 863, 1054, 1323, 1377
BseRI GAGGAG 4 cut(s) 581, 793, 926, 1295
BseSI GKGCMC 1 cut(s) 1022
BseXI GCAGC 6 cut(s) 139, 418, 810, 1189, 1398, 1415
BseYI CCCAGC 1 cut(s) 1205
BsgI GTGCAG 1 cut(s) 425
BshFI GGCC 3 cut(s) 383, 955, 1194
BsiHKAI GWGCWC 1 cut(s) 1022
BsiSI CCGG 3 cut(s) 122, 956, 1061
BslFI GGGAC 2 cut(s) 983, 1370
BslI CCNNNNNNNGG 6 cut(s) 121, 390, 446, 1048, 1060, 1393
BsmAI GTCTC 1 cut(s) 1062
BsmFI GGGAC 2 cut(s) 983, 1370
BsnI GGCC 3 cut(s) 383, 955, 1194
Bsp1286I GDGCHC 1 cut(s) 1022
Bsp143I GATC 4 cut(s) 118, 311, 358, 1352
Bsp1720I GCTNAGC 1 cut(s) 600
BspACI CCGC 7 cut(s) 98, 391, 643, 753, 821, 1034, 1085
BspANI GGCC 3 cut(s) 383, 955, 1194
BspCNI CTCAG 8 cut(s) 283, 307, 390, 408, 592, 727, 783, 1006
BspLI GGNNCC 3 cut(s) 270, 700, 837
BspMAI CTGCAG 1 cut(s) 157
BspPI GGATC 2 cut(s) 113, 319
BspQI GCTCTTC 2 cut(s) 597, 921
BsrDI GCAATG 1 cut(s) 137
BsrFI RCCGGY 1 cut(s) 955
BsrI ACTGG 6 cut(s) 237, 784, 863, 1054, 1323, 1377
BssAI RCCGGY 1 cut(s) 955
BssECI CCNNGG 3 cut(s) 189, 384, 1042
BssMI GATC 4 cut(s) 118, 311, 358, 1352
BssNAI GTATAC 1 cut(s) 948
BssSI CACGAG 1 cut(s) 1421
BssT1I CCWWGG 1 cut(s) 189
Bst1107I GTATAC 1 cut(s) 948
Bst2BI CACGAG 1 cut(s) 1421
Bst2UI CCWGG 4 cut(s) 385, 441, 840, 1043
Bst4CI ACNGT 6 cut(s) 58, 65, 811, 884, 1024, 1260
Bst6I CTCTTC 4 cut(s) 554, 597, 720, 921
BstC8I GCNNGC 2 cut(s) 588, 957
BstEII GGTNACC 1 cut(s) 515
BstF5I GGATG 5 cut(s) 513, 664, 982, 1053, 1303
BstHHI GCGC 1 cut(s) 209
BstKTI GATC 4 cut(s) 121, 314, 361, 1355
BstMAI GTCTC 1 cut(s) 1062
BstMBI GATC 4 cut(s) 118, 311, 358, 1352
BstMWI GCNNNNNNNGC 3 cut(s) 139, 296, 596
BstNI CCWGG 4 cut(s) 385, 441, 840, 1043
BstNSI RCATGY 1 cut(s) 1175
BstPAI GACNNNNGTC 1 cut(s) 56
BstPI GGTNACC 1 cut(s) 515
BstSCI CCNGG 4 cut(s) 383, 439, 838, 1041
BstSFI CTRYAG 2 cut(s) 61, 153
BstSLI GKGCMC 1 cut(s) 1022
BstV1I GCAGC 6 cut(s) 139, 418, 810, 1189, 1398, 1415
BstV2I GAAGAC 3 cut(s) 554, 1234, 1280
BstX2I RGATCY 1 cut(s) 311
BstXI CCANNNNNNTGG 1 cut(s) 503
BstYI RGATCY 1 cut(s) 311
BstZ17I GTATAC 1 cut(s) 948
BsuI GTATCC 2 cut(s) 229, 841
BsuRI GGCC 3 cut(s) 383, 955, 1194
BtsCI GGATG 5 cut(s) 513, 664, 982, 1053, 1303
BtsIMutI CAGTG 4 cut(s) 54, 230, 870, 1029
Cac8I GCNNGC 2 cut(s) 588, 957
CaiI CAGNNNCTG 2 cut(s) 215, 790
CfoI GCGC 1 cut(s) 209
Cfr10I RCCGGY 1 cut(s) 955
Cfr13I GGNCC 3 cut(s) 381, 836, 1051
Csp6I GTAC 3 cut(s) 640, 885, 1064
CviAII CATG 4 cut(s) 149, 605, 614, 1172
CviQI GTAC 3 cut(s) 640, 885, 1064
DpnI GATC 4 cut(s) 120, 313, 360, 1354
DpnII GATC 4 cut(s) 118, 311, 358, 1352
DraI TTTAAA 2 cut(s) 277, 1074
Eam1104I CTCTTC 4 cut(s) 554, 597, 720, 921
EarI CTCTTC 4 cut(s) 554, 597, 720, 921
Eco130I CCWWGG 1 cut(s) 189
Eco47I GGWCC 2 cut(s) 836, 1051
Eco57I CTGAAG 3 cut(s) 321, 566, 1410
Eco91I GGTNACC 1 cut(s) 515
EcoO65I GGTNACC 1 cut(s) 515
EcoRI GAATTC 1 cut(s) 624
EcoRII CCWGG 4 cut(s) 383, 439, 838, 1041
EcoT14I CCWWGG 1 cut(s) 189
ErhI CCWWGG 1 cut(s) 189
FaeI CATG 4 cut(s) 152, 608, 617, 1175
FalI AAGNNNNNCTT 4 cut(s) 173, 205, 419, 451
FaqI GGGAC 2 cut(s) 983, 1370
FatI CATG 4 cut(s) 148, 604, 613, 1171
FauI CCCGC 1 cut(s) 828
FblI GTMKAC 3 cut(s) 60, 161, 947
Fnu4HI GCNGC 8 cut(s) 153, 407, 753, 824, 1035, 1203, 1404, 1412
FokI GGATG 5 cut(s) 520, 671, 989, 1060, 1310
Fsp4HI GCNGC 8 cut(s) 153, 407, 753, 824, 1035, 1203, 1404, 1412
FspBI CTAG 3 cut(s) 453, 888, 1188
GlaI GCGC 1 cut(s) 208
GluI GCNGC 8 cut(s) 153, 407, 753, 824, 1035, 1203, 1404, 1412
GsaI CCCAGC 1 cut(s) 1209
GsuI CTGGAG 1 cut(s) 741
HaeIII GGCC 3 cut(s) 383, 955, 1194
HapII CCGG 3 cut(s) 122, 956, 1061
HhaI GCGC 1 cut(s) 209
Hin1II CATG 4 cut(s) 152, 608, 617, 1175
Hin6I GCGC 1 cut(s) 207
HinP1I GCGC 1 cut(s) 207
HincII GTYRAC 1 cut(s) 162
HindII GTYRAC 1 cut(s) 162
HinfI GANTC 9 cut(s) 4, 79, 195, 212, 259, 528, 686, 877, 971
HpaII CCGG 3 cut(s) 122, 956, 1061
HphI GGTGA 6 cut(s) 509, 680, 852, 994, 1136, 1378
Hpy166II GTNNAC 5 cut(s) 61, 162, 948, 1020, 1310
Hpy188I TCNGA 6 cut(s) 84, 258, 316, 976, 1006, 1015
Hpy188III TCNNGA 4 cut(s) 453, 629, 720, 845
Hpy8I GTNNAC 5 cut(s) 61, 162, 948, 1020, 1310
Hpy99I CGWCG 1 cut(s) 88
HpyAV CCTTC 3 cut(s) 712, 1133, 1357
HpyCH4III ACNGT 6 cut(s) 58, 65, 811, 884, 1024, 1260
HpyCH4IV ACGT 1 cut(s) 1093
HpyCH4V TGCA 5 cut(s) 155, 406, 826, 1020, 1268
HpyF10VI GCNNNNNNNGC 3 cut(s) 139, 296, 596
HpySE526I ACGT 1 cut(s) 1093
Hsp92II CATG 4 cut(s) 152, 608, 617, 1175
HspAI GCGC 1 cut(s) 207
KroI GCCGGC 1 cut(s) 955
KroNI GCCGGC 1 cut(s) 957
Kzo9I GATC 4 cut(s) 118, 311, 358, 1352
LguI GCTCTTC 2 cut(s) 597, 921
LmnI GCTCC 2 cut(s) 130, 704
Lsp1109I GCAGC 6 cut(s) 139, 418, 810, 1189, 1398, 1415
LweI GCATC 1 cut(s) 1072
MaeI CTAG 3 cut(s) 453, 888, 1188
MaeII ACGT 1 cut(s) 1093
MaeIII GTNAC 5 cut(s) 49, 515, 674, 878, 1024
MalI GATC 4 cut(s) 120, 313, 360, 1354
MboI GATC 4 cut(s) 118, 311, 358, 1352
MflI RGATCY 1 cut(s) 311
MhlI GDGCHC 1 cut(s) 1022
MluCI AATT 8 cut(s) 29, 327, 464, 624, 706, 828, 1008, 1322
MlyI GAGTC 6 cut(s) 88, 204, 206, 537, 886, 965
MmeI TCCRAC 2 cut(s) 107, 108
MroNI GCCGGC 1 cut(s) 955
MroXI GAANNNNTTC 2 cut(s) 1000, 1331
MseI TTAA 3 cut(s) 276, 1073, 1110
MspA1I CMGCKG 1 cut(s) 823
MspI CCGG 3 cut(s) 122, 956, 1061
MspR9I CCNGG 4 cut(s) 385, 441, 840, 1043
MvaI CCWGG 4 cut(s) 385, 441, 840, 1043
MwoI GCNNNNNNNGC 3 cut(s) 139, 296, 596
NaeI GCCGGC 1 cut(s) 957
NdeII GATC 4 cut(s) 118, 311, 358, 1352
NgoMIV GCCGGC 1 cut(s) 955
NlaIII CATG 4 cut(s) 152, 608, 617, 1175
NlaIV GGNNCC 3 cut(s) 270, 700, 837
NmuCI GTSAC 5 cut(s) 49, 515, 674, 878, 1024
NspI RCATGY 1 cut(s) 1175
PciI ACATGT 1 cut(s) 1171
PciSI GCTCTTC 2 cut(s) 597, 921
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PdiI GCCGGC 1 cut(s) 957
PdmI GAANNNNTTC 2 cut(s) 1000, 1331
PfeI GAWTC 2 cut(s) 259, 686
PflFI GACNNNGTC 1 cut(s) 166
PflMI CCANNNNNTGG 2 cut(s) 446, 1048
PfoI TCCNGGA 1 cut(s) 439
PkrI GCNGC 8 cut(s) 154, 408, 754, 825, 1036, 1204, 1405, 1413
PleI GAGTC 6 cut(s) 87, 203, 206, 536, 885, 965
PpsI GAGTC 6 cut(s) 87, 203, 206, 536, 885, 965
PscI ACATGT 1 cut(s) 1171
PshAI GACNNNNGTC 1 cut(s) 56
Psp1406I AACGTT 1 cut(s) 1093
Psp6I CCWGG 4 cut(s) 383, 439, 838, 1041
PspEI GGTNACC 1 cut(s) 515
PspFI CCCAGC 1 cut(s) 1205
PspGI CCWGG 4 cut(s) 383, 439, 838, 1041
PspN4I GGNNCC 3 cut(s) 270, 700, 837
PspPI GGNCC 3 cut(s) 381, 836, 1051
PstI CTGCAG 1 cut(s) 157
PstNI CAGNNNCTG 2 cut(s) 215, 790
PsuI RGATCY 1 cut(s) 311
PsyI GACNNNGTC 1 cut(s) 166
RsaI GTAC 3 cut(s) 641, 886, 1065
RsaNI GTAC 3 cut(s) 640, 885, 1064
SalI GTCGAC 1 cut(s) 160
SapI GCTCTTC 2 cut(s) 597, 921
SaqAI TTAA 3 cut(s) 276, 1073, 1110
SatI GCNGC 8 cut(s) 153, 407, 753, 824, 1035, 1203, 1404, 1412
Sau3AI GATC 4 cut(s) 118, 311, 358, 1352
Sau96I GGNCC 3 cut(s) 381, 836, 1051
ScaI AGTACT 1 cut(s) 886
SchI GAGTC 6 cut(s) 88, 204, 206, 537, 886, 965
ScrFI CCNGG 4 cut(s) 385, 441, 840, 1043
SduI GDGCHC 1 cut(s) 1022
SfaNI GCATC 1 cut(s) 1072
SfcI CTRYAG 2 cut(s) 61, 153
SinI GGWCC 2 cut(s) 836, 1051
SpeI ACTAGT 1 cut(s) 1187
Sse9I AATT 8 cut(s) 29, 327, 464, 624, 706, 828, 1008, 1322
SsiI CCGC 7 cut(s) 98, 391, 643, 753, 821, 1034, 1085
SspI AATATT 1 cut(s) 1330
SspMI CTAG 3 cut(s) 453, 888, 1188
StyD4I CCNGG 4 cut(s) 383, 439, 838, 1041
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 6 cut(s) 58, 65, 811, 884, 1024, 1260
TaiI ACGT 1 cut(s) 1096
TaqI TCGA 6 cut(s) 117, 161, 170, 361, 425, 963
TasI AATT 8 cut(s) 29, 327, 464, 624, 706, 828, 1008, 1322
TatI WGTACW 1 cut(s) 884
TauI GCSGC 2 cut(s) 755, 1037
TfiI GAWTC 2 cut(s) 259, 686
Tru1I TTAA 3 cut(s) 276, 1073, 1110
Tru9I TTAA 3 cut(s) 276, 1073, 1110
TscAI CASTG 4 cut(s) 54, 237, 870, 1029
TseFI GTSAC 5 cut(s) 49, 515, 674, 878, 1024
TseI GCWGC 6 cut(s) 152, 406, 823, 1202, 1403, 1411
Tsp45I GTSAC 5 cut(s) 49, 515, 674, 878, 1024
TspDTI ATGAA 4 cut(s) 42, 126, 489, 602
TspGWI ACGGA 2 cut(s) 261, 1327
TspRI CASTG 4 cut(s) 54, 237, 870, 1029
Tth111I GACNNNGTC 1 cut(s) 166
Van91I CCANNNNNTGG 2 cut(s) 446, 1048
VneI GTGCAC 1 cut(s) 1018
VpaK11BI GGWCC 2 cut(s) 836, 1051
XapI RAATTY 3 cut(s) 464, 624, 1008
XbaI TCTAGA 1 cut(s) 452
XceI RCATGY 1 cut(s) 1175
XmiI GTMKAC 3 cut(s) 60, 161, 947
XmnI GAANNNNTTC 2 cut(s) 1000, 1331
XspI CTAG 3 cut(s) 453, 888, 1188
ZrmI AGTACT 1 cut(s) 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.